RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 CASD1Q96PB1 797 aa16.02■□□□□ 0.16
SCLT1-209ENST00000511426 PAAF1Q9BRP4 392 aa16.02■□□□□ 0.16
SCLT1-209ENST00000511426 PNPLA8Q9NP80 782 aa16.02■□□□□ 0.16
SCLT1-209ENST00000511426 ST7Q9NRC1 585 aa16.02■□□□□ 0.16
SCLT1-209ENST00000511426 ARGLU1Q9NWB6 273 aaPredicted RBP16.02■□□□□ 0.16
SCLT1-209ENST00000511426 KIAA0355O15063 1070 aa16.02■□□□□ 0.15
SCLT1-209ENST00000511426 SART1O43290 800 aaKnown RBP16.02■□□□□ 0.15
SCLT1-209ENST00000511426 DDHD2O94830 711 aa16.02■□□□□ 0.15
SCLT1-209ENST00000511426 FAM200BP0CF97 657 aa16.02■□□□□ 0.15
SCLT1-209ENST00000511426 CCDC130P13994 396 aa16.02■□□□□ 0.15
SCLT1-209ENST00000511426 DNA2P51530 1060 aa16.02■□□□□ 0.15
SCLT1-209ENST00000511426 CCL23P55773 120 aa16.02■□□□□ 0.15
SCLT1-209ENST00000511426 RPL7AP62424 266 aaKnown RBP16.02■□□□□ 0.15
SCLT1-209ENST00000511426 TSPY1Q01534 308 aa16.02■□□□□ 0.15
SCLT1-209ENST00000511426 INTS6LQ5JSJ4 861 aaKnown RBP16.02■□□□□ 0.15
SCLT1-209ENST00000511426 FAM102AQ5T9C2 384 aaPredicted RBP16.02■□□□□ 0.15
SCLT1-209ENST00000511426 CYP4A22Q5TCH4 519 aa16.02■□□□□ 0.15
SCLT1-209ENST00000511426 PMF1Q6P1K2 205 aa16.02■□□□□ 0.15
SCLT1-209ENST00000511426 FAM171BQ6P995 826 aa16.02■□□□□ 0.15
SCLT1-209ENST00000511426 SLC26A9Q7LBE3 791 aa16.02■□□□□ 0.15
SCLT1-209ENST00000511426 KATNAL2Q8IYT4 538 aa16.02■□□□□ 0.15
SCLT1-209ENST00000511426 DIS3LQ8TF46 1054 aaKnown RBP16.02■□□□□ 0.15
SCLT1-209ENST00000511426 ALG3Q92685 438 aa16.02■□□□□ 0.15
SCLT1-209ENST00000511426 SCLYQ96I15 445 aa16.02■□□□□ 0.15
SCLT1-209ENST00000511426 PAWRQ96IZ0 340 aaKnown RBP16.02■□□□□ 0.15
SCLT1-209ENST00000511426 BTBD6Q96KE9 485 aa16.02■□□□□ 0.15
SCLT1-209ENST00000511426 COLEC11Q9BWP8 271 aa16.02■□□□□ 0.15
SCLT1-209ENST00000511426 PPP1R12CQ9BZL4 782 aa16.02■□□□□ 0.15
SCLT1-209ENST00000511426 DDX56Q9NY93 547 aaKnown RBP16.02■□□□□ 0.15
SCLT1-209ENST00000511426 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.01■□□□□ 0.15
SCLT1-209ENST00000511426 DPYSL4O14531 572 aa16.01■□□□□ 0.15
SCLT1-209ENST00000511426 OAZ2O95190 189 aa16.01■□□□□ 0.15
SCLT1-209ENST00000511426 TIMP1P01033 207 aa16.01■□□□□ 0.15
SCLT1-209ENST00000511426 GLI1P08151 1106 aa16.01■□□□□ 0.15
SCLT1-209ENST00000511426 CYP2C18P33260 490 aa16.01■□□□□ 0.15
SCLT1-209ENST00000511426 PCK1P35558 622 aa16.01■□□□□ 0.15
SCLT1-209ENST00000511426 ZNF143P52747 638 aaPredicted RBP16.01■□□□□ 0.15
SCLT1-209ENST00000511426 SLC6A3Q01959 620 aa16.01■□□□□ 0.15
SCLT1-209ENST00000511426 YWHAHQ04917 246 aaPredicted RBP16.01■□□□□ 0.15
SCLT1-209ENST00000511426 HADHQ16836 314 aaKnown RBP16.01■□□□□ 0.15
SCLT1-209ENST00000511426 DCAF12L1Q5VU92 463 aa16.01■□□□□ 0.15
SCLT1-209ENST00000511426 OVOS1Q6IE37 1185 aa16.01■□□□□ 0.15
SCLT1-209ENST00000511426 OLFML1Q6UWY5 402 aa16.01■□□□□ 0.15
SCLT1-209ENST00000511426 EXD1Q8NHP7 514 aa16.01■□□□□ 0.15
SCLT1-209ENST00000511426 SMARCD1Q96GM5 515 aa16.01■□□□□ 0.15
SCLT1-209ENST00000511426 RUNDC3BQ96NL0 473 aa16.01■□□□□ 0.15
SCLT1-209ENST00000511426 METTL5Q9NRN9 209 aaKnown RBP16.01■□□□□ 0.15
SCLT1-209ENST00000511426 ASNSD1Q9NWL6 643 aa16.01■□□□□ 0.15
SCLT1-209ENST00000511426 TSC2P49815 1807 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 RNF8O76064 485 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 FBXO21O94952 628 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 ALDH2P05091 517 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 KRT7P08729 469 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 PSMA2P25787 234 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 ADORA2BP29275 332 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 RFC1P35251 1148 aaPredicted RBP16■□□□□ 0.15
SCLT1-209ENST00000511426 BRCC3P46736 316 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 OR1G1P47890 313 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 COPS2P61201 443 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 EFHC1Q5JVL4 640 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 OR6B2Q6IFH4 312 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 C4orf50Q6ZRC1 276 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 ZNF280BQ86YH2 543 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 KRT35Q92764 455 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 RBM41Q96IZ5 413 aaKnown RBP16■□□□□ 0.15
SCLT1-209ENST00000511426 MS4A14Q96JA4 679 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 CNPY3Q9BT09 278 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 TRIM7Q9C029 511 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 CSNK1G1Q9HCP0 422 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 CRTAC1Q9NQ79 661 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 ADAM28Q9UKQ2 775 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 MTUS1Q9ULD2 1270 aa16■□□□□ 0.15
SCLT1-209ENST00000511426 SF3B1O75533 1304 aaKnown RBP eCLIP16■□□□□ 0.15
SCLT1-209ENST00000511426 C2CD4BA6NLJ0 364 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 GOLGA8SH3BPF8 625 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 TADA2AO75478 443 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 BAIAP3O94812 1187 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 FGGP02679 453 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 GPD1P21695 349 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 IBSPP21815 317 aaPredicted RBP15.99■□□□□ 0.15
SCLT1-209ENST00000511426 TKTP29401 623 aaKnown RBP15.99■□□□□ 0.15
SCLT1-209ENST00000511426 MDH1BQ5I0G3 518 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 LLGL2Q6P1M3 1020 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 CC2D1AQ6P1N0 951 aaPredicted RBP15.99■□□□□ 0.15
SCLT1-209ENST00000511426 WDR93Q6P2C0 686 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 FAM183BPQ6ZVS7 135 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 FAM35AQ86V20 835 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 NOA1Q8NC60 698 aaKnown RBP15.99■□□□□ 0.15
SCLT1-209ENST00000511426 PCED1BQ96HM7 432 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 SLITRK6Q9H5Y7 841 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 NRDE2Q9H7Z3 1164 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.99■□□□□ 0.15
SCLT1-209ENST00000511426 CACNG4Q9UBN1 327 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 RAB21Q9UL25 225 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 CENPFP49454 3210 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 TTC3P53804 2025 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 KRIT1O00522 736 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 ZRANB2O95218 330 aaKnown RBP eCLIP15.99■□□□□ 0.15
SCLT1-209ENST00000511426 PTPN7P35236 360 aa15.99■□□□□ 0.15
SCLT1-209ENST00000511426 ZNF252P-AS1Q0IIN9 211 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms