RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 FSHRP23945 695 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 GRIK1P39086 918 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 UBXN1Q04323 297 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 SGO2Q562F6 1265 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 CYP4A22Q5TCH4 519 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 APTXQ7Z2E3 356 aaKnown RBP13.65□□□□□ -0.22
COL6A6-203ENST00000511332 ADHFE1Q8IWW8 467 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 FUKQ8N0W3 1084 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 TDRD5Q8NAT2 981 aaKnown RBP13.65□□□□□ -0.22
COL6A6-203ENST00000511332 RBBP8NLQ8NC74 664 aaPredicted RBP13.65□□□□□ -0.22
COL6A6-203ENST00000511332 KAT5Q92993 513 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 CYFIP2Q96F07 1278 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 SPATA17Q96L03 361 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 C8orf48Q96LL4 319 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 HEXIM2Q96MH2 286 aaKnown RBP13.65□□□□□ -0.22
COL6A6-203ENST00000511332 KREMEN1Q96MU8 473 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 GCNAQ96QF7 691 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 HNRNPABQ99729 332 aaKnown RBP13.65□□□□□ -0.22
COL6A6-203ENST00000511332 LPIN3Q9BQK8 851 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 LSM14BQ9BX40 385 aaKnown RBP13.65□□□□□ -0.22
COL6A6-203ENST00000511332 SIX2Q9NPC8 291 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 PLCB1Q9NQ66 1216 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 DNMT3BQ9UBC3 853 aaKnown RBP13.65□□□□□ -0.22
COL6A6-203ENST00000511332 UXTQ9UBK9 157 aaPredicted RBP13.65□□□□□ -0.22
COL6A6-203ENST00000511332 KIAA1257Q9ULG3 409 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 USTQ9Y2C2 406 aa13.65□□□□□ -0.22
COL6A6-203ENST00000511332 C5orf42Q9H799 3197 aa13.65□□□□□ -0.23
COL6A6-203ENST00000511332 ZNF197O14709 1029 aa13.64□□□□□ -0.23
COL6A6-203ENST00000511332 AP1G2O75843 785 aa13.64□□□□□ -0.23
COL6A6-203ENST00000511332 SERPINC1P01008 464 aa13.64□□□□□ -0.23
COL6A6-203ENST00000511332 FAM200BP0CF97 657 aa13.64□□□□□ -0.23
COL6A6-203ENST00000511332 KRT5P13647 590 aa13.64□□□□□ -0.23
COL6A6-203ENST00000511332 CD19P15391 556 aa13.64□□□□□ -0.23
COL6A6-203ENST00000511332 ADORA2BP29275 332 aa13.64□□□□□ -0.23
COL6A6-203ENST00000511332 GPR15P49685 360 aa13.64□□□□□ -0.23
COL6A6-203ENST00000511332 EPHA5P54756 1037 aa13.64□□□□□ -0.23
COL6A6-203ENST00000511332 SLC8A3P57103 927 aa13.64□□□□□ -0.23
COL6A6-203ENST00000511332 KCNMA1Q12791 1236 aa13.64□□□□□ -0.23
COL6A6-203ENST00000511332 DDR2Q16832 855 aa13.64□□□□□ -0.23
COL6A6-203ENST00000511332 ARHGAP17Q68EM7 881 aa13.64□□□□□ -0.23
COL6A6-203ENST00000511332 GET4Q7L5D6 327 aaPredicted RBP13.64□□□□□ -0.23
COL6A6-203ENST00000511332 OTOP3Q7RTS5 596 aa13.64□□□□□ -0.23
COL6A6-203ENST00000511332 C12orf29Q8N999 325 aa13.64□□□□□ -0.23
COL6A6-203ENST00000511332 FEZF2Q8TBJ5 459 aa13.64□□□□□ -0.23
COL6A6-203ENST00000511332 ADAMTS19Q8TE59 1207 aa13.64□□□□□ -0.23
COL6A6-203ENST00000511332 SHC3Q92529 594 aa13.64□□□□□ -0.23
COL6A6-203ENST00000511332 ACSF2Q96CM8 615 aaPredicted RBP13.64□□□□□ -0.23
COL6A6-203ENST00000511332 TRMT2BQ96GJ1 504 aaKnown RBP13.64□□□□□ -0.23
COL6A6-203ENST00000511332 PCMTD1Q96MG8 357 aaPredicted RBP13.64□□□□□ -0.23
COL6A6-203ENST00000511332 ERGIC2Q96RQ1 377 aa13.64□□□□□ -0.23
COL6A6-203ENST00000511332 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.64□□□□□ -0.23
COL6A6-203ENST00000511332 CNTN6Q9UQ52 1028 aa13.64□□□□□ -0.23
COL6A6-203ENST00000511332 ZFP37Q9Y6Q3 630 aaPredicted RBP13.64□□□□□ -0.23
COL6A6-203ENST00000511332 F8VP50 259 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 NOL4O94818 638 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 MICAL2O94851 1124 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 VDRP11473 427 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 MYL4P12829 197 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 UCHL3P15374 230 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 CDC25CP30307 473 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 ZNF132P52740 706 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 NTHL1P78549 312 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 APBA1Q02410 837 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 ZP2Q05996 745 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 RAPGEF1Q13905 1077 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 SYCP1Q15431 976 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 STILQ15468 1287 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 ARHGAP44Q17R89 818 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 PRSS36Q5K4E3 855 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 PPP1R26Q5T8A7 1209 aaPredicted RBP13.63□□□□□ -0.23
COL6A6-203ENST00000511332 KLHDC7AQ5VTJ3 777 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 GJB7Q6PEY0 223 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 DENND5BQ6ZUT9 1274 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 DNAJB7Q7Z6W7 309 aaPredicted RBP13.63□□□□□ -0.23
COL6A6-203ENST00000511332 TMC8Q8IU68 726 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 GPR152Q8TDT2 470 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 GIPC2Q8TF65 315 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 CSNK1G1Q9HCP0 422 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 PNPLA8Q9NP80 782 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 HESX1Q9UBX0 185 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 DNAJC12Q9UKB3 198 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 SIK3Q9Y2K2 1263 aa13.63□□□□□ -0.23
COL6A6-203ENST00000511332 MRPS23Q9Y3D9 190 aaKnown RBP13.63□□□□□ -0.23
COL6A6-203ENST00000511332 A0A1B0GTH6 734 aa13.62□□□□□ -0.23
COL6A6-203ENST00000511332 SLC38A8A6NNN8 435 aa13.62□□□□□ -0.23
COL6A6-203ENST00000511332 RTN3O95197 1032 aaPredicted RBP13.62□□□□□ -0.23
COL6A6-203ENST00000511332 NPR3P17342 541 aa13.62□□□□□ -0.23
COL6A6-203ENST00000511332 GBP2P32456 591 aaPredicted RBP13.62□□□□□ -0.23
COL6A6-203ENST00000511332 CACNA2D1P54289 1103 aa13.62□□□□□ -0.23
COL6A6-203ENST00000511332 BCAT1P54687 386 aa13.62□□□□□ -0.23
COL6A6-203ENST00000511332 SLC5A9Q2M3M2 681 aa13.62□□□□□ -0.23
COL6A6-203ENST00000511332 GOLGA7BQ2TAP0 167 aa13.62□□□□□ -0.23
COL6A6-203ENST00000511332 SDHAF4Q5VUM1 108 aa13.62□□□□□ -0.23
COL6A6-203ENST00000511332 CLEC20AQ6ZU45 233 aa13.62□□□□□ -0.23
COL6A6-203ENST00000511332 PAQR9Q6ZVX9 377 aa13.62□□□□□ -0.23
COL6A6-203ENST00000511332 PLCD3Q8N3E9 789 aa13.62□□□□□ -0.23
COL6A6-203ENST00000511332 NEK11Q8NG66 645 aa13.62□□□□□ -0.23
COL6A6-203ENST00000511332 RPGRIP1Q96KN7 1286 aa13.62□□□□□ -0.23
COL6A6-203ENST00000511332 MYRFLQ96LU7 910 aa13.62□□□□□ -0.23
COL6A6-203ENST00000511332 ANP32EQ9BTT0 268 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms