RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 ANAPC1Q9H1A4 1944 aa12.96□□□□□ -0.33
CLDND1-223ENST00000511081 NCAM2O15394 837 aa12.96□□□□□ -0.33
CLDND1-223ENST00000511081 CALUO43852 315 aaPredicted RBP12.96□□□□□ -0.33
CLDND1-223ENST00000511081 TADA3O75528 432 aa12.96□□□□□ -0.33
CLDND1-223ENST00000511081 PTPN1P18031 435 aaKnown RBP12.96□□□□□ -0.33
CLDND1-223ENST00000511081 TRPC3Q13507 836 aa12.96□□□□□ -0.33
CLDND1-223ENST00000511081 NCOA4Q13772 614 aa12.96□□□□□ -0.33
CLDND1-223ENST00000511081 ZNF268Q14587 947 aaPredicted RBP12.96□□□□□ -0.33
CLDND1-223ENST00000511081 SGSM1Q2NKQ1 1148 aa12.96□□□□□ -0.33
CLDND1-223ENST00000511081 COBLL1Q53SF7 1204 aa12.96□□□□□ -0.33
CLDND1-223ENST00000511081 SDHAF4Q5VUM1 108 aa12.96□□□□□ -0.33
CLDND1-223ENST00000511081 SV2AQ7L0J3 742 aa12.96□□□□□ -0.33
CLDND1-223ENST00000511081 CELF5Q8N6W0 485 aaKnown RBP12.96□□□□□ -0.33
CLDND1-223ENST00000511081 BPIFB1Q8TDL5 484 aa12.96□□□□□ -0.33
CLDND1-223ENST00000511081 MSANTD3Q96H12 275 aa12.96□□□□□ -0.33
CLDND1-223ENST00000511081 PCED1BQ96HM7 432 aa12.96□□□□□ -0.33
CLDND1-223ENST00000511081 C8orf48Q96LL4 319 aa12.96□□□□□ -0.33
CLDND1-223ENST00000511081 FAM83CQ9BQN1 747 aa12.96□□□□□ -0.33
CLDND1-223ENST00000511081 TTLL2Q9BWV7 592 aa12.96□□□□□ -0.33
CLDND1-223ENST00000511081 BCO2Q9BYV7 579 aa12.96□□□□□ -0.33
CLDND1-223ENST00000511081 SNX25Q9H3E2 840 aa12.96□□□□□ -0.33
CLDND1-223ENST00000511081 C8orf33Q9H7E9 229 aaPredicted RBP12.96□□□□□ -0.33
CLDND1-223ENST00000511081 FBXO4Q9UKT5 387 aa12.96□□□□□ -0.33
CLDND1-223ENST00000511081 KIF26AQ9ULI4 1882 aaPredicted RBP12.95□□□□□ -0.34
CLDND1-223ENST00000511081 PHACTR2O75167 634 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 AKAP3O75969 853 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 SP9P0CG40 484 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 BDNFP23560 247 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 PSMC1P62191 440 aaKnown RBP12.95□□□□□ -0.34
CLDND1-223ENST00000511081 TNNC1P63316 161 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 PLCB2Q00722 1185 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 UBXN2BQ14CS0 331 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 ZNF528Q3MIS6 628 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 TXNDC8Q6A555 127 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 C1orf228Q6PIY5 440 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 GPIHBP1Q8IV16 184 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 YAF2Q8IY57 180 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 ELOA2Q8IYF1 753 aaPredicted RBP12.95□□□□□ -0.34
CLDND1-223ENST00000511081 MAB21L3Q8N8X9 362 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 OR6B3Q8NGW1 331 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 MRPS31Q92665 395 aaKnown RBP12.95□□□□□ -0.34
CLDND1-223ENST00000511081 TAF4BQ92750 862 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 NELL1Q92832 810 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 USP13Q92995 863 aaPredicted RBP12.95□□□□□ -0.34
CLDND1-223ENST00000511081 MYLPFQ96A32 169 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 TIGD1Q96MW7 591 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 GCNAQ96QF7 691 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 SEMA4AQ9H3S1 761 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 TDP1Q9NUW8 608 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 GCNT4Q9P109 453 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 FRMD4BQ9Y2L6 1034 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 PIAS3Q9Y6X2 628 aa12.95□□□□□ -0.34
CLDND1-223ENST00000511081 EP300Q09472 2414 aaPredicted RBP12.94□□□□□ -0.34
CLDND1-223ENST00000511081 GVINP1Q7Z2Y8 2422 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 ZNF638Q14966 1978 aaKnown RBP12.94□□□□□ -0.34
CLDND1-223ENST00000511081 DPYSL4O14531 572 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 ASS1P00966 412 aaKnown RBP12.94□□□□□ -0.34
CLDND1-223ENST00000511081 CHRNB1P11230 501 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 TCF3P15923 654 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 NR2F2P24468 414 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 RPL13P26373 211 aaKnown RBP12.94□□□□□ -0.34
CLDND1-223ENST00000511081 CDH8P55286 799 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 NOP14P78316 857 aaKnown RBP12.94□□□□□ -0.34
CLDND1-223ENST00000511081 ADAM9Q13443 819 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 BIRC3Q13489 604 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 EDRF1Q3B7T1 1238 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 ZNF667Q5HYK9 610 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 CEP135Q66GS9 1140 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 PAQR9Q6ZVX9 377 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 INTS8Q75QN2 995 aaKnown RBP12.94□□□□□ -0.34
CLDND1-223ENST00000511081 ASCL5Q7RTU5 278 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 FRMD5Q7Z6J6 570 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 RALGPS2Q86X27 583 aaPredicted RBP12.94□□□□□ -0.34
CLDND1-223ENST00000511081 SCN4BQ8IWT1 228 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 CRYBG2Q8N1P7 616 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 B3GALNT2Q8NCR0 500 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 STKLD1Q8NE28 680 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 CSGALNACT1Q8TDX6 532 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 FAM3CQ92520 227 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 CCDC34Q96HJ3 373 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 GSDMAQ96QA5 445 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 B3GNT5Q9BYG0 378 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 SDCBP2Q9H190 292 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 KIF9Q9HAQ2 790 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 GKN1Q9NS71 199 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 TMEM30AQ9NV96 361 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 IL37Q9NZH6 218 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 NXF1Q9UBU9 619 aaKnown RBP12.94□□□□□ -0.34
CLDND1-223ENST00000511081 MAGED2Q9UNF1 606 aaPredicted RBP12.94□□□□□ -0.34
CLDND1-223ENST00000511081 MAPK8IP1Q9UQF2 711 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 CCL26Q9Y258 94 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 PATJQ8NI35 1801 aa12.94□□□□□ -0.34
CLDND1-223ENST00000511081 SPTBN4Q9H254 2564 aa12.93□□□□□ -0.34
CLDND1-223ENST00000511081 PRR23AA6NEV1 266 aa12.93□□□□□ -0.34
CLDND1-223ENST00000511081 A8MXQ7 604 aa12.93□□□□□ -0.34
CLDND1-223ENST00000511081 GFRA3O60609 400 aa12.93□□□□□ -0.34
CLDND1-223ENST00000511081 PFKLP17858 780 aa12.93□□□□□ -0.34
CLDND1-223ENST00000511081 PSMC2P35998 433 aaKnown RBP12.93□□□□□ -0.34
CLDND1-223ENST00000511081 AVPR1AP37288 418 aa12.93□□□□□ -0.34
CLDND1-223ENST00000511081 VAMP7P51809 220 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms