RNA–Protein interactions for RNA: ENST00000511032.5

DHFR-205, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-205ENST00000511032 ACBD6Q9BR61 282 aa11.25□□□□□ -0.61
DHFR-205ENST00000511032 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.25□□□□□ -0.612e-6■■■□□ 15
DHFR-205ENST00000511032 TMEM175Q9BSA9 504 aa11.25□□□□□ -0.61
DHFR-205ENST00000511032 OXCT2Q9BYC2 517 aaPredicted RBP11.25□□□□□ -0.61
DHFR-205ENST00000511032 GOLPH3Q9H4A6 298 aa11.25□□□□□ -0.61
DHFR-205ENST00000511032 LRRC4Q9HBW1 653 aa11.25□□□□□ -0.61
DHFR-205ENST00000511032 TBC1D13Q9NVG8 400 aa11.25□□□□□ -0.61
DHFR-205ENST00000511032 PRKAG2Q9UGJ0 569 aa11.25□□□□□ -0.61
DHFR-205ENST00000511032 PCDHA3Q9Y5H8 950 aa11.25□□□□□ -0.61
DHFR-205ENST00000511032 SF3B1O75533 1304 aaKnown RBP eCLIP11.24□□□□□ -0.611e-7■■■■■ 172.3
DHFR-205ENST00000511032 TMEM191CA6NGB0 347 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 SYN3O14994 580 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 ZNF185O15231 689 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 SART1O43290 800 aaKnown RBP11.24□□□□□ -0.61
DHFR-205ENST00000511032 AMHP03971 560 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 CCDC130P13994 396 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 RAG1P15918 1043 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 NPR3P17342 541 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 PSMA2P25787 234 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 LMO2P25791 158 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 CYP2C18P33260 490 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 SCNN1AP37088 669 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 PDE4CQ08493 712 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 GLE1Q53GS7 698 aaKnown RBP11.24□□□□□ -0.61
DHFR-205ENST00000511032 C2CD6Q53TS8 623 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 CYP4A22Q5TCH4 519 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 C4orf50Q6ZRC1 276 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 PHLDB2Q86SQ0 1253 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 XYLT1Q86Y38 959 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 COLGALT2Q8IYK4 626 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 NIPA2Q8N8Q9 360 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 SPATA4Q8NEY3 305 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 SLC35F5Q8WV83 523 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 RUBCNQ92622 972 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 MCRS1Q96EZ8 462 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 SMARCD1Q96GM5 515 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 DUSP16Q9BY84 665 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 DPEP3Q9H4B8 488 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 SCUBE2Q9NQ36 999 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 PRDM5Q9NQX1 630 aaPredicted RBP11.24□□□□□ -0.61
DHFR-205ENST00000511032 METTL5Q9NRN9 209 aaKnown RBP11.24□□□□□ -0.61
DHFR-205ENST00000511032 ASNSD1Q9NWL6 643 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 DDX56Q9NY93 547 aaKnown RBP11.24□□□□□ -0.61
DHFR-205ENST00000511032 TTC7AQ9ULT0 858 aaPredicted RBP11.24□□□□□ -0.61
DHFR-205ENST00000511032 USTQ9Y2C2 406 aa11.24□□□□□ -0.61
DHFR-205ENST00000511032 E5RJQ4 531 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 DDX3YO15523 660 aaKnown RBP11.23□□□□□ -0.61
DHFR-205ENST00000511032 TIMP1P01033 207 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 ERBB2P04626 1255 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 KRT7P08729 469 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 PLA2G4AP47712 749 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 SMC1AQ14683 1233 aaKnown RBP11.23□□□□□ -0.61
DHFR-205ENST00000511032 ELF2Q15723 593 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 PTPROQ16827 1216 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 LONRF2Q1L5Z9 754 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 ERCC6LQ2NKX8 1250 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 PAN2Q504Q3 1202 aaKnown RBP11.23□□□□□ -0.61
DHFR-205ENST00000511032 PKDCCQ504Y2 493 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 MDH1BQ5I0G3 518 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 EFHC1Q5JVL4 640 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 IER5LQ5T953 404 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 LRRC38Q5VT99 294 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 RSRC2Q7L4I2 434 aaKnown RBP11.23□□□□□ -0.61
DHFR-205ENST00000511032 TMEM110Q86TL2 294 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 OSTM1Q86WC4 334 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 TTC30AQ86WT1 665 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 DCP1BQ8IZD4 617 aaKnown RBP11.23□□□□□ -0.61
DHFR-205ENST00000511032 SIX6OS1Q8N1H7 587 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 RASGEF1CQ8N431 466 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 C3orf58Q8NDZ4 430 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 MYCBPAPQ8TBZ2 947 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 DIS3LQ8TF46 1054 aaKnown RBP11.23□□□□□ -0.61
DHFR-205ENST00000511032 RBM41Q96IZ5 413 aaKnown RBP11.23□□□□□ -0.61
DHFR-205ENST00000511032 BTBD6Q96KE9 485 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 RNPC3Q96LT9 517 aaKnown RBP11.23□□□□□ -0.61
DHFR-205ENST00000511032 RUNDC3BQ96NL0 473 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 TRIM62Q9BVG3 475 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 SLC4A5Q9BY07 1137 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 CHORDC1Q9UHD1 332 aaPredicted RBP11.23□□□□□ -0.61
DHFR-205ENST00000511032 FAN1Q9Y2M0 1017 aa11.23□□□□□ -0.61
DHFR-205ENST00000511032 TBKBP1A7MCY6 615 aa11.22□□□□□ -0.61
DHFR-205ENST00000511032 KRIT1O00522 736 aa11.22□□□□□ -0.61
DHFR-205ENST00000511032 ERLIN1O75477 346 aa11.22□□□□□ -0.61
DHFR-205ENST00000511032 AP1G2O75843 785 aa11.22□□□□□ -0.61
DHFR-205ENST00000511032 DDHD2O94830 711 aa11.22□□□□□ -0.61
DHFR-205ENST00000511032 FBXO21O94952 628 aa11.22□□□□□ -0.61
DHFR-205ENST00000511032 GPD1P21695 349 aa11.22□□□□□ -0.61
DHFR-205ENST00000511032 ACAT1P24752 427 aaKnown RBP11.22□□□□□ -0.61
DHFR-205ENST00000511032 BRCC3P46736 316 aa11.22□□□□□ -0.61
DHFR-205ENST00000511032 RGS7P49802 495 aa11.22□□□□□ -0.61
DHFR-205ENST00000511032 SLC6A3Q01959 620 aa11.22□□□□□ -0.61
DHFR-205ENST00000511032 NFE2Q16621 373 aaPredicted RBP11.22□□□□□ -0.61
DHFR-205ENST00000511032 INTS6LQ5JSJ4 861 aaKnown RBP11.22□□□□□ -0.61
DHFR-205ENST00000511032 PPP1R15BQ5SWA1 713 aa11.22□□□□□ -0.61
DHFR-205ENST00000511032 C8orf74Q6P047 294 aa11.22□□□□□ -0.61
DHFR-205ENST00000511032 CC2D1AQ6P1N0 951 aaPredicted RBP11.22□□□□□ -0.61
DHFR-205ENST00000511032 ARCQ7LC44 396 aa11.22□□□□□ -0.61
DHFR-205ENST00000511032 CCDC50Q8IVM0 306 aa11.22□□□□□ -0.61
DHFR-205ENST00000511032 MMGT1Q8N4V1 131 aa11.22□□□□□ -0.61
DHFR-205ENST00000511032 CCDC26Q8TAB7 109 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms