RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 SLC11A2P49281 568 aa6.36□□□□□ -1.39
NUP54-209ENST00000510569 PDE1AP54750 535 aa6.36□□□□□ -1.39
NUP54-209ENST00000510569 MYO1EQ12965 1108 aa6.36□□□□□ -1.39
NUP54-209ENST00000510569 GTF2H3Q13889 308 aa6.36□□□□□ -1.39
NUP54-209ENST00000510569 PTPROQ16827 1216 aa6.36□□□□□ -1.39
NUP54-209ENST00000510569 MTHFD1LQ6UB35 978 aa6.36□□□□□ -1.39
NUP54-209ENST00000510569 KIRREL2Q6UWL6 708 aa6.36□□□□□ -1.39
NUP54-209ENST00000510569 NAPRTQ6XQN6 538 aa6.36□□□□□ -1.39
NUP54-209ENST00000510569 CATSPERGQ6ZRH7 1159 aa6.36□□□□□ -1.39
NUP54-209ENST00000510569 CHSY1Q86X52 802 aa6.36□□□□□ -1.39
NUP54-209ENST00000510569 GALNT16Q8N428 558 aa6.36□□□□□ -1.39
NUP54-209ENST00000510569 ZNF48Q96MX3 618 aaPredicted RBP6.36□□□□□ -1.39
NUP54-209ENST00000510569 SH2D3AQ9BRG2 576 aa6.36□□□□□ -1.39
NUP54-209ENST00000510569 CXorf36Q9H7Y0 433 aa6.36□□□□□ -1.39
NUP54-209ENST00000510569 IP6K2Q9UHH9 426 aa6.36□□□□□ -1.39
NUP54-209ENST00000510569 TMX2Q9Y320 296 aa6.36□□□□□ -1.39
NUP54-209ENST00000510569 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.36□□□□□ -1.39
NUP54-209ENST00000510569 SFPQP23246 707 aaKnown RBP eCLIP6.35□□□□□ -1.39
NUP54-209ENST00000510569 CTGFP29279 349 aa6.35□□□□□ -1.39
NUP54-209ENST00000510569 SATB1Q01826 763 aa6.35□□□□□ -1.39
NUP54-209ENST00000510569 SLC9A4Q6AI14 798 aa6.35□□□□□ -1.39
NUP54-209ENST00000510569 C8orf58Q8NAV2 365 aa6.35□□□□□ -1.39
NUP54-209ENST00000510569 DENND1AQ8TEH3 1009 aa6.35□□□□□ -1.39
NUP54-209ENST00000510569 DIS3LQ8TF46 1054 aaKnown RBP6.35□□□□□ -1.39
NUP54-209ENST00000510569 FCRL4Q96PJ5 515 aa6.35□□□□□ -1.39
NUP54-209ENST00000510569 ASB2Q96Q27 587 aa6.35□□□□□ -1.39
NUP54-209ENST00000510569 AASDHPPTQ9NRN7 309 aa6.35□□□□□ -1.39
NUP54-209ENST00000510569 CNNM1Q9NRU3 951 aa6.35□□□□□ -1.39
NUP54-209ENST00000510569 A0A087WWL8 130 aa6.34□□□□□ -1.39
NUP54-209ENST00000510569 H3BML4 177 aa6.34□□□□□ -1.39
NUP54-209ENST00000510569 hCG_1984214I3L0E3 225 aa6.34□□□□□ -1.39
NUP54-209ENST00000510569 TOP3BO95985 862 aaKnown RBP6.34□□□□□ -1.39
NUP54-209ENST00000510569 XRCC6P12956 609 aaKnown RBP eCLIP6.34□□□□□ -1.39
NUP54-209ENST00000510569 ARFIP2P53365 341 aa6.34□□□□□ -1.39
NUP54-209ENST00000510569 ZNF267Q14586 743 aaPredicted RBP6.34□□□□□ -1.39
NUP54-209ENST00000510569 IFIT1BQ5T764 474 aaKnown RBP6.34□□□□□ -1.39
NUP54-209ENST00000510569 GAS2L3Q86XJ1 694 aa6.34□□□□□ -1.39
NUP54-209ENST00000510569 SLC15A3Q8IY34 581 aa6.34□□□□□ -1.39
NUP54-209ENST00000510569 PNLDC1Q8NA58 520 aaKnown RBP6.34□□□□□ -1.39
NUP54-209ENST00000510569 ABHD11Q8NFV4 315 aa6.34□□□□□ -1.39
NUP54-209ENST00000510569 KBTBD7Q8WVZ9 684 aa6.34□□□□□ -1.39
NUP54-209ENST00000510569 XAGE5Q8WWM1 108 aa6.34□□□□□ -1.39
NUP54-209ENST00000510569 DAZAP1Q96EP5 407 aaKnown RBP6.34□□□□□ -1.39
NUP54-209ENST00000510569 RITA1Q96K30 269 aa6.34□□□□□ -1.39
NUP54-209ENST00000510569 TRIM54Q9BYV2 358 aa6.34□□□□□ -1.39
NUP54-209ENST00000510569 PRSS22Q9GZN4 317 aa6.34□□□□□ -1.39
NUP54-209ENST00000510569 ARMT1Q9H993 441 aa6.34□□□□□ -1.39
NUP54-209ENST00000510569 TYW1Q9NV66 732 aaKnown RBP6.34□□□□□ -1.39
NUP54-209ENST00000510569 PIH1D1Q9NWS0 290 aaKnown RBP6.34□□□□□ -1.39
NUP54-209ENST00000510569 CPA4Q9UI42 421 aa6.34□□□□□ -1.39
NUP54-209ENST00000510569 TBC1D30Q9Y2I9 924 aa6.34□□□□□ -1.39
NUP54-209ENST00000510569 MRPS17Q9Y2R5 130 aaKnown RBP6.34□□□□□ -1.39
NUP54-209ENST00000510569 DLDP09622 509 aaKnown RBP6.33□□□□□ -1.4
NUP54-209ENST00000510569 DGKEP52429 567 aa6.33□□□□□ -1.4
NUP54-209ENST00000510569 GPSM2P81274 684 aa6.33□□□□□ -1.4
NUP54-209ENST00000510569 FGL2Q14314 439 aa6.33□□□□□ -1.4
NUP54-209ENST00000510569 TBC1D25Q3MII6 688 aa6.33□□□□□ -1.4
NUP54-209ENST00000510569 ZIK1Q3SY52 487 aaPredicted RBP6.33□□□□□ -1.4
NUP54-209ENST00000510569 DEPDC1Q5TB30 811 aa6.33□□□□□ -1.4
NUP54-209ENST00000510569 BHLHA9Q7RTU4 235 aa6.33□□□□□ -1.4
NUP54-209ENST00000510569 ZNF280BQ86YH2 543 aa6.33□□□□□ -1.4
NUP54-209ENST00000510569 DENND1CQ8IV53 801 aa6.33□□□□□ -1.4
NUP54-209ENST00000510569 OSCP1Q8WVF1 389 aa6.33□□□□□ -1.4
NUP54-209ENST00000510569 GPATCH3Q96I76 525 aa6.33□□□□□ -1.4
NUP54-209ENST00000510569 LENG8Q96PV6 779 aaPredicted RBP6.33□□□□□ -1.4
NUP54-209ENST00000510569 SNX18Q96RF0 628 aa6.33□□□□□ -1.4
NUP54-209ENST00000510569 P2RX7Q99572 595 aaKnown RBP6.33□□□□□ -1.4
NUP54-209ENST00000510569 RHOBTB2Q9BYZ6 727 aa6.33□□□□□ -1.4
NUP54-209ENST00000510569 DPH1Q9BZG8 443 aa6.33□□□□□ -1.4
NUP54-209ENST00000510569 GABBR1Q9UBS5 961 aa6.33□□□□□ -1.4
NUP54-209ENST00000510569 PNMA8BQ9ULN7 279 aaPredicted RBP6.33□□□□□ -1.4
NUP54-209ENST00000510569 NOP58Q9Y2X3 529 aaKnown RBP6.33□□□□□ -1.4
NUP54-209ENST00000510569 CYP2D7A0A087X1C5 515 aa6.32□□□□□ -1.4
NUP54-209ENST00000510569 SMIM35A0A1B0GVV1 85 aa6.32□□□□□ -1.4
NUP54-209ENST00000510569 POC1B-GALNT4F8VUJ3 575 aa6.32□□□□□ -1.4
NUP54-209ENST00000510569 KCNAB3O43448 404 aa6.32□□□□□ -1.4
NUP54-209ENST00000510569 PRKCBP05771 671 aa6.32□□□□□ -1.4
NUP54-209ENST00000510569 CHRM5P08912 532 aaPredicted RBP6.32□□□□□ -1.4
NUP54-209ENST00000510569 MGAT5BQ3V5L5 792 aa6.32□□□□□ -1.4
NUP54-209ENST00000510569 FCRL6Q6DN72 434 aa6.32□□□□□ -1.4
NUP54-209ENST00000510569 SLC2A7Q6PXP3 512 aa6.32□□□□□ -1.4
NUP54-209ENST00000510569 ABRAQ8N0Z2 381 aa6.32□□□□□ -1.4
NUP54-209ENST00000510569 GALNT4Q8N4A0 578 aa6.32□□□□□ -1.4
NUP54-209ENST00000510569 C5orf34Q96MH7 638 aa6.32□□□□□ -1.4
NUP54-209ENST00000510569 AIFM3Q96NN9 605 aa6.32□□□□□ -1.4
NUP54-209ENST00000510569 STAP2Q9UGK3 403 aa6.32□□□□□ -1.4
NUP54-209ENST00000510569 ZNF521Q96K83 1311 aa6.31□□□□□ -1.4
NUP54-209ENST00000510569 MYO1CO00159 1063 aa6.31□□□□□ -1.4
NUP54-209ENST00000510569 USP1O94782 785 aa6.31□□□□□ -1.4
NUP54-209ENST00000510569 IGKV2-30P06310 120 aa6.31□□□□□ -1.4
NUP54-209ENST00000510569 NPR1P16066 1061 aa6.31□□□□□ -1.4
NUP54-209ENST00000510569 KCNA3P22001 575 aa6.31□□□□□ -1.4
NUP54-209ENST00000510569 HTR1BP28222 390 aa6.31□□□□□ -1.4
NUP54-209ENST00000510569 ADORA2AP29274 412 aa6.31□□□□□ -1.4
NUP54-209ENST00000510569 PIN1Q13526 163 aaPredicted RBP6.31□□□□□ -1.4
NUP54-209ENST00000510569 DAZAP2Q15038 168 aaPredicted RBP6.31□□□□□ -1.4
NUP54-209ENST00000510569 CYP1B1Q16678 543 aa6.31□□□□□ -1.4
NUP54-209ENST00000510569 DNAJC5GQ8N7S2 189 aa6.31□□□□□ -1.4
NUP54-209ENST00000510569 TERB1Q8NA31 727 aa6.31□□□□□ -1.4
NUP54-209ENST00000510569 RSPRY1Q96DX4 576 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms