RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 ANKRD53Q8N9V6 530 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 PCSK9Q8NBP7 692 aaKnown RBP4.87□□□□□ -1.63
NIPBL-206ENST00000509429 NOC3LQ8WTT2 800 aaKnown RBP4.87□□□□□ -1.63
NIPBL-206ENST00000509429 CCT6BQ92526 530 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 ARL8AQ96BM9 186 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 PSKH2Q96QS6 385 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 PPP1R9BQ96SB3 815 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 RUFY1Q96T51 708 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 FSD1Q9BTV5 496 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 SLC26A6Q9BXS9 759 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 R3HDMLQ9H3Y0 253 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 C8orf33Q9H7E9 229 aaPredicted RBP4.87□□□□□ -1.63
NIPBL-206ENST00000509429 MSL2Q9HCI7 577 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 HOMER3Q9NSC5 361 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 NSMCE4AQ9NXX6 385 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 GGT7Q9UJ14 662 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 ZNF711Q9Y462 761 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 PTCH2Q9Y6C5 1203 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 HFM1A2PYH4 1435 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 FGD6Q6ZV73 1430 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 UACAQ9BZF9 1416 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 SNAPC4Q5SXM2 1469 aa4.87□□□□□ -1.63
NIPBL-206ENST00000509429 ABCA5Q8WWZ7 1642 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 UQCRHLA0A096LP55 91 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 A0A0G2JPF8 293 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 MYADML2A6NDP7 307 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 TMEM221A6NGB7 291 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 MEIS3P2A8K0S8 358 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 HNRNPCL3B7ZW38 293 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 PI4K2BG5E9Z4 385 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 H7C0S8 307 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 MATN2O00339 956 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 YKT6O15498 198 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 REC8O95072 547 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 GOSR1O95249 250 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 UQCRHP07919 91 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 HNRNPCL4P0DMR1 293 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 HSPA8P11142 646 aaKnown RBP4.86□□□□□ -1.63
NIPBL-206ENST00000509429 TOP1P11387 765 aaKnown RBP4.86□□□□□ -1.63
NIPBL-206ENST00000509429 ZFXP17010 805 aaPredicted RBP4.86□□□□□ -1.63
NIPBL-206ENST00000509429 ELF1P32519 619 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 SLC16A2P36021 539 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 CLK3P49761 638 aaKnown RBP4.86□□□□□ -1.63
NIPBL-206ENST00000509429 COG7P83436 770 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 KLHL30Q0D2K2 578 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 CRHR2Q13324 411 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 IFIT5Q13325 482 aaKnown RBP4.86□□□□□ -1.63
NIPBL-206ENST00000509429 GRM3Q14832 879 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 CRYMQ14894 314 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 SART3Q15020 963 aaKnown RBP4.86□□□□□ -1.63
NIPBL-206ENST00000509429 TERF2Q15554 542 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 MEA1Q16626 185 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 C21orf62-AS1Q17RA5 79 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 MMEL1Q495T6 779 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 Q4G0T1 1027 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 ARHGAP29Q52LW3 1261 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 PHF19Q5T6S3 580 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 AADACL4Q5VUY2 407 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 ADALQ6DHV7 355 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 C8orf74Q6P047 294 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 ALKBH5Q6P6C2 394 aaKnown RBP4.86□□□□□ -1.63
NIPBL-206ENST00000509429 C11orf88Q6PI97 169 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 ZNF600Q6ZNG1 722 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 BNIPLQ7Z465 357 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 KDELC2Q7Z4H8 507 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 HOOK3Q86VS8 718 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 OSTM1Q86WC4 334 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 SLC41A1Q8IVJ1 513 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 NIM1KQ8IY84 436 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 SPARTQ8N0X7 666 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 TMCO5AQ8N6Q1 288 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 NPLOC4Q8TAT6 608 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 FAM81AQ8TBF8 368 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 ADAMTS18Q8TE60 1221 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 THAP3Q8WTV1 239 aaPredicted RBP4.86□□□□□ -1.63
NIPBL-206ENST00000509429 CATSPER2Q96P56 530 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 SEC62Q99442 399 aaKnown RBP4.86□□□□□ -1.63
NIPBL-206ENST00000509429 APOL5Q9BWW9 433 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 TRIM5Q9C035 493 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 C2orf40Q9H1Z8 148 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 CLSTN2Q9H4D0 955 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 SERHL2Q9H4I8 314 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 EHD1Q9H4M9 534 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 ACAD9Q9H845 621 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 CRLF2Q9HC73 371 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 FKBP14Q9NWM8 211 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 MCM9Q9NXL9 1143 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 HSPBP1Q9NZL4 362 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 DDX25Q9UHL0 483 aaKnown RBP4.86□□□□□ -1.63
NIPBL-206ENST00000509429 PTBP2Q9UKA9 531 aaKnown RBP4.86□□□□□ -1.63
NIPBL-206ENST00000509429 CRYL1Q9Y2S2 319 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 TMED5Q9Y3A6 229 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 CHTOPQ9Y3Y2 248 aaKnown RBP4.86□□□□□ -1.63
NIPBL-206ENST00000509429 TIMM22Q9Y584 194 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 CARMIL1Q5VZK9 1371 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 PHLDB1Q86UU1 1377 aa4.86□□□□□ -1.63
NIPBL-206ENST00000509429 TRAV6A0A075B6T7 132 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 GOLGA6L4A6NEF3 574 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 CCDC169A6NNP5 214 aa4.85□□□□□ -1.63
NIPBL-206ENST00000509429 B4DLN1 442 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms