RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 GPIHBP1Q8IV16 184 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 ANKRD52Q8NB46 1076 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 TFAP2BQ92481 460 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 BAP1Q92560 729 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 PABPC5Q96DU9 382 aaKnown RBP15.72■□□□□ 0.11
RNF4-213ENST00000509388 RHOBTB2Q9BYZ6 727 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 TTYH3Q9C0H2 523 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 CRISPLD1Q9H336 500 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 SFXN1Q9H9B4 322 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 PIDD1Q9HB75 910 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 DMAP1Q9NPF5 467 aaPredicted RBP15.72■□□□□ 0.11
RNF4-213ENST00000509388 ACP6Q9NPH0 428 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 ZNHIT6Q9NWK9 470 aaKnown RBP15.72■□□□□ 0.11
RNF4-213ENST00000509388 ZDHHC7Q9NXF8 308 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 YIPF1Q9Y548 306 aa15.72■□□□□ 0.11
RNF4-213ENST00000509388 CCDC195A0A1B0GUA6 201 aa15.71■□□□□ 0.11
RNF4-213ENST00000509388 M0QYV0 167 aa15.71■□□□□ 0.11
RNF4-213ENST00000509388 O00370 1275 aa15.71■□□□□ 0.11
RNF4-213ENST00000509388 SOAT2O75908 522 aa15.71■□□□□ 0.11
RNF4-213ENST00000509388 VNN2O95498 520 aa15.71■□□□□ 0.11
RNF4-213ENST00000509388 HNRNPA1P09651 372 aaKnown RBP eCLIP15.71■□□□□ 0.11
RNF4-213ENST00000509388 HOXB8P17481 243 aaPredicted RBP15.71■□□□□ 0.11
RNF4-213ENST00000509388 MAP3K7CLP57077 242 aa15.71■□□□□ 0.11
RNF4-213ENST00000509388 DDR2Q16832 855 aa15.71■□□□□ 0.11
RNF4-213ENST00000509388 TAF3Q5VWG9 929 aa15.71■□□□□ 0.11
RNF4-213ENST00000509388 ANKRD54Q6NXT1 300 aa15.71■□□□□ 0.11
RNF4-213ENST00000509388 LCLAT1Q6UWP7 414 aa15.71■□□□□ 0.11
RNF4-213ENST00000509388 PAQR9Q6ZVX9 377 aa15.71■□□□□ 0.11
RNF4-213ENST00000509388 ITIH5Q86UX2 942 aa15.71■□□□□ 0.11
RNF4-213ENST00000509388 CNGA4Q8IV77 575 aa15.71■□□□□ 0.11
RNF4-213ENST00000509388 TTC9BQ8N6N2 239 aa15.71■□□□□ 0.11
RNF4-213ENST00000509388 VN1R2Q8NFZ6 395 aa15.71■□□□□ 0.11
RNF4-213ENST00000509388 UBA3Q8TBC4 463 aa15.71■□□□□ 0.11
RNF4-213ENST00000509388 ZNF512Q96ME7 567 aaPredicted RBP15.71■□□□□ 0.11
RNF4-213ENST00000509388 DUSP16Q9BY84 665 aa15.71■□□□□ 0.11
RNF4-213ENST00000509388 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.71■□□□□ 0.116e-6■■■■■ 55.1
RNF4-213ENST00000509388 CEP83Q9Y592 693 aa15.71■□□□□ 0.11
RNF4-213ENST00000509388 MYO9BQ13459 2157 aa15.7■□□□□ 0.1
RNF4-213ENST00000509388 AKR1B15C9JRZ8 316 aaPredicted RBP15.7■□□□□ 0.1
RNF4-213ENST00000509388 F8VP50 259 aa15.7■□□□□ 0.1
RNF4-213ENST00000509388 CCL16O15467 120 aa15.7■□□□□ 0.1
RNF4-213ENST00000509388 RFPL2O75678 378 aa15.7■□□□□ 0.1
RNF4-213ENST00000509388 MICAL2O94851 1124 aa15.7■□□□□ 0.1
RNF4-213ENST00000509388 GLP2RO95838 553 aa15.7■□□□□ 0.1
RNF4-213ENST00000509388 NPR3P17342 541 aa15.7■□□□□ 0.1
RNF4-213ENST00000509388 HOXA9P31269 272 aa15.7■□□□□ 0.1
RNF4-213ENST00000509388 BCAT1P54687 386 aa15.7■□□□□ 0.1
RNF4-213ENST00000509388 KCNC3Q14003 757 aa15.7■□□□□ 0.1
RNF4-213ENST00000509388 CTC1Q2NKJ3 1217 aa15.7■□□□□ 0.1
RNF4-213ENST00000509388 CES5AQ6NT32 575 aa15.7■□□□□ 0.1
RNF4-213ENST00000509388 TMC5Q6UXY8 1006 aa15.7■□□□□ 0.1
RNF4-213ENST00000509388 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.7■□□□□ 0.1
RNF4-213ENST00000509388 ZNF677Q86XU0 584 aa15.7■□□□□ 0.1
RNF4-213ENST00000509388 C12orf76Q8N812 135 aaPredicted RBP15.7■□□□□ 0.1
RNF4-213ENST00000509388 OR8K1Q8NGG5 319 aa15.7■□□□□ 0.1
RNF4-213ENST00000509388 GIPC2Q8TF65 315 aa15.7■□□□□ 0.1
RNF4-213ENST00000509388 SYN2Q92777 582 aaPredicted RBP15.7■□□□□ 0.1
RNF4-213ENST00000509388 C8orf48Q96LL4 319 aa15.7■□□□□ 0.1
RNF4-213ENST00000509388 PRKD2Q9BZL6 878 aa15.7■□□□□ 0.1
RNF4-213ENST00000509388 SEPT11Q9NVA2 429 aaKnown RBP15.7■□□□□ 0.1
RNF4-213ENST00000509388 EHD2Q9NZN4 543 aa15.7■□□□□ 0.1
RNF4-213ENST00000509388 AIPL1Q9NZN9 384 aa15.7■□□□□ 0.1
RNF4-213ENST00000509388 ASB3Q9Y575 518 aa15.7■□□□□ 0.1
RNF4-213ENST00000509388 TSC2P49815 1807 aa15.69■□□□□ 0.1
RNF4-213ENST00000509388 SETSIPP0DME0 302 aa15.69■□□□□ 0.1
RNF4-213ENST00000509388 CDC25BP30305 580 aa15.69■□□□□ 0.1
RNF4-213ENST00000509388 SSTR3P32745 418 aaPredicted RBP15.69■□□□□ 0.1
RNF4-213ENST00000509388 GPR15P49685 360 aa15.69■□□□□ 0.1
RNF4-213ENST00000509388 KLHL30Q0D2K2 578 aa15.69■□□□□ 0.1
RNF4-213ENST00000509388 BST2Q10589 180 aaKnown RBP15.69■□□□□ 0.1
RNF4-213ENST00000509388 RARS2Q5T160 578 aaKnown RBP15.69■□□□□ 0.1
RNF4-213ENST00000509388 SDHAF4Q5VUM1 108 aa15.69■□□□□ 0.1
RNF4-213ENST00000509388 CLEC20AQ6ZU45 233 aa15.69■□□□□ 0.1
RNF4-213ENST00000509388 NOP9Q86U38 636 aaKnown RBP15.69■□□□□ 0.1
RNF4-213ENST00000509388 MAFAQ8NHW3 353 aaPredicted RBP15.69■□□□□ 0.1
RNF4-213ENST00000509388 EPS8L1Q8TE68 723 aa15.69■□□□□ 0.1
RNF4-213ENST00000509388 SMG7Q92540 1137 aaKnown RBP15.69■□□□□ 0.1
RNF4-213ENST00000509388 HLA-CQ95604 372 aa15.69■□□□□ 0.1
RNF4-213ENST00000509388 CEP295NLQ96MC4 621 aa15.69■□□□□ 0.1
RNF4-213ENST00000509388 NOX5Q96PH1 765 aa15.69■□□□□ 0.1
RNF4-213ENST00000509388 KCNK16Q96T55 309 aa15.69■□□□□ 0.1
RNF4-213ENST00000509388 SMOQ99835 787 aa15.69■□□□□ 0.1
RNF4-213ENST00000509388 ZSWIM1Q9BR11 485 aa15.69■□□□□ 0.1
RNF4-213ENST00000509388 APOL5Q9BWW9 433 aa15.69■□□□□ 0.1
RNF4-213ENST00000509388 BZW2Q9Y6E2 419 aaKnown RBP15.69■□□□□ 0.1
RNF4-213ENST00000509388 MFAP3LO75121 409 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 CSH1P0DML2 217 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 CSH2P0DML3 217 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 PTPN2P17706 415 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 TNFAIP3P21580 790 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 CACNA2D1P54289 1103 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 ADKP55263 362 aaKnown RBP15.68■□□□□ 0.1
RNF4-213ENST00000509388 CDR2Q01850 454 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 ITIH3Q06033 890 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 PDE4CQ08493 712 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 MEA1Q16626 185 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 TDRD12Q587J7 1177 aaKnown RBP15.68■□□□□ 0.1
RNF4-213ENST00000509388 ATAT1Q5SQI0 421 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 CYP4A22Q5TCH4 519 aa15.68■□□□□ 0.1
RNF4-213ENST00000509388 DENND1BQ6P3S1 775 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms