RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, human

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-208	ENST00000509165	AHSG	P02765	367 aa		5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	BMP5	P22003	454 aa		5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	ZNF135	P52742	658 aa	Predicted RBP	5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	FPGS	Q05932	587 aa		5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	HLX	Q14774	488 aa	Predicted RBP	5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	ZNF169	Q14929	603 aa	Predicted RBP	5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	ODR4	Q5SWX8	454 aa		5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	IFIT1B	Q5T764	474 aa	Known RBP	5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	EMC10	Q5UCC4	262 aa		5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	MICALCL	Q6ZW33	695 aa		5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	EPM2AIP1	Q7L775	607 aa	Predicted RBP	5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	GRAMD1C	Q8IYS0	662 aa		5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	SH2D3C	Q8N5H7	860 aa		5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	LPIN2	Q92539	896 aa		5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	SLC35A4	Q96G79	324 aa		5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	SMO	Q99835	787 aa		5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	SLAMF7	Q9NQ25	335 aa		5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	ANLN	Q9NQW6	1124 aa		5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	PCDHA1	Q9Y5I3	950 aa		5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	ANKRD50	Q9ULJ7	1429 aa		5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	POLR2A	P24928	1970 aa	Known RBP	5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	RPRD2	Q5VT52	1461 aa	Known RBP	5.2	□□□□□ -1.58
NFKB1-208	ENST00000509165	PARD3	Q8TEW0	1356 aa		5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165		H3BML4	177 aa		5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	POLRMT	O00411	1230 aa	Known RBP	5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	AP1G1	O43747	822 aa		5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	IL12RB1	P42701	662 aa		5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	NANOS3	P60323	173 aa	Known RBP	5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	SIM1	P81133	766 aa	Predicted RBP	5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	SIMC1	Q8NDZ2	872 aa		5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	SLC30A5	Q8TAD4	765 aa		5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	KLHDC4	Q8TBB5	520 aa		5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	SLC35G2	Q8TBE7	412 aa		5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	SNX19	Q92543	992 aa		5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	TNPO1	Q92973	898 aa	Known RBP	5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	ZG16B	Q96DA0	208 aa		5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	CDK5RAP3	Q96JB5	506 aa		5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	PDLIM2	Q96JY6	352 aa		5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	TAAR9	Q96RI9	348 aa		5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	LRFN3	Q9BTN0	628 aa		5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	CNPPD1	Q9BV87	410 aa		5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	TINAGL1	Q9GZM7	467 aa	Predicted RBP	5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	SMOC2	Q9H3U7	446 aa		5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	GABBR1	Q9UBS5	961 aa		5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	STXBP5L	Q9Y2K9	1186 aa		5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	ATP10D	Q9P241	1426 aa		5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	SPATA31A3	Q5VYP0	1347 aa		5.19	□□□□□ -1.58
NFKB1-208	ENST00000509165	COL11A2	P13942	1736 aa	Predicted RBP	5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	TNS2	Q63HR2	1409 aa		5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165		H3BUI4	141 aa		5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	TOR1B	O14657	336 aa		5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	MGST3	O14880	152 aa		5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	KIAA0355	O15063	1070 aa		5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	DNAJB5	O75953	348 aa		5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	KIF20A	O95235	890 aa		5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	CT47B1	P0C2W7	299 aa	Predicted RBP	5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	TSPY4	P0CV99	314 aa		5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	TSPY10	P0CW01	314 aa		5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	HDC	P19113	662 aa		5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	CXCR5	P32302	372 aa		5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	FOLR3	P41439	243 aa		5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	RARRES1	P49788	294 aa		5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	EXOSC9	Q06265	439 aa	Known RBP	5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	GTF2H3	Q13889	308 aa		5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	BOP1	Q14137	746 aa	Known RBP	5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	NFE2	Q16621	373 aa	Predicted RBP	5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	NBPF8	Q3BBV2	869 aa		5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	TAF2	Q6P1X5	1199 aa		5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	USP37	Q86T82	979 aa		5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	PRIMA1	Q86XR5	153 aa		5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	CELF5	Q8N6W0	485 aa	Known RBP	5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	FAM98A	Q8NCA5	519 aa	Known RBP	5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	PSD4	Q8NDX1	1056 aa		5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	ACO2	Q99798	780 aa	Known RBP	5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	NMRK2	Q9NPI5	230 aa		5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	DMTF1	Q9Y222	760 aa		5.18	□□□□□ -1.58
NFKB1-208	ENST00000509165	MET	P08581	1390 aa		5.17	□□□□□ -1.58
NFKB1-208	ENST00000509165	ABCA3	Q99758	1704 aa		5.17	□□□□□ -1.58
NFKB1-208	ENST00000509165		A0A088AWK7	358 aa		5.17	□□□□□ -1.58
NFKB1-208	ENST00000509165	WDR27	A2RRH5	827 aa		5.17	□□□□□ -1.58
NFKB1-208	ENST00000509165	ZAR1L	A6NP61	321 aa		5.17	□□□□□ -1.58
NFKB1-208	ENST00000509165	YY2	O15391	372 aa		5.17	□□□□□ -1.58
NFKB1-208	ENST00000509165	PRPF3	O43395	683 aa	Known RBP	5.17	□□□□□ -1.58
NFKB1-208	ENST00000509165	PPP3CB	P16298	524 aa		5.17	□□□□□ -1.58
NFKB1-208	ENST00000509165	NPTX2	P47972	431 aa		5.17	□□□□□ -1.58
NFKB1-208	ENST00000509165	LRRC41	Q15345	812 aa		5.17	□□□□□ -1.58
NFKB1-208	ENST00000509165	SLC30A10	Q6XR72	485 aa		5.17	□□□□□ -1.58
NFKB1-208	ENST00000509165	TSHZ1	Q6ZSZ6	1077 aa		5.17	□□□□□ -1.58
NFKB1-208	ENST00000509165	ZNF575	Q86XF7	245 aa		5.17	□□□□□ -1.58
NFKB1-208	ENST00000509165	DENND1C	Q8IV53	801 aa		5.17	□□□□□ -1.58
NFKB1-208	ENST00000509165	MYCBPAP	Q8TBZ2	947 aa		5.17	□□□□□ -1.58
NFKB1-208	ENST00000509165	MRGPRX1	Q96LB2	322 aa		5.17	□□□□□ -1.58
NFKB1-208	ENST00000509165	ZNHIT2	Q9UHR6	403 aa		5.17	□□□□□ -1.58
NFKB1-208	ENST00000509165	TNFRSF18	Q9Y5U5	241 aa		5.17	□□□□□ -1.58
NFKB1-208	ENST00000509165	PDE4DIP	Q5VU43	2346 aa		5.16	□□□□□ -1.58
NFKB1-208	ENST00000509165	TNRC18	O15417	2968 aa	Predicted RBP	5.16	□□□□□ -1.58
NFKB1-208	ENST00000509165	MPPED1	O15442	326 aa		5.16	□□□□□ -1.58
NFKB1-208	ENST00000509165	PEX1	O43933	1283 aa		5.16	□□□□□ -1.58
NFKB1-208	ENST00000509165	UBXN7	O94888	489 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms