RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 VSTM1Q6UX27 236 aa13.37□□□□□ -0.27
PDPN-208ENST00000509009 Q6ZS52 159 aa13.37□□□□□ -0.27
PDPN-208ENST00000509009 SYNPOQ8N3V7 929 aa13.37□□□□□ -0.27
PDPN-208ENST00000509009 MYCBPAPQ8TBZ2 947 aa13.37□□□□□ -0.27
PDPN-208ENST00000509009 RMDN1Q96DB5 314 aa13.37□□□□□ -0.27
PDPN-208ENST00000509009 PAGE5Q96GU1 130 aa13.37□□□□□ -0.27
PDPN-208ENST00000509009 SPATA17Q96L03 361 aa13.37□□□□□ -0.27
PDPN-208ENST00000509009 SLC22A12Q96S37 553 aa13.37□□□□□ -0.27
PDPN-208ENST00000509009 CGRRF1Q99675 332 aa13.37□□□□□ -0.27
PDPN-208ENST00000509009 EBF3Q9H4W6 596 aa13.37□□□□□ -0.27
PDPN-208ENST00000509009 KIF9Q9HAQ2 790 aa13.37□□□□□ -0.27
PDPN-208ENST00000509009 GCNT4Q9P109 453 aa13.37□□□□□ -0.27
PDPN-208ENST00000509009 NCDNQ9UBB6 729 aa13.37□□□□□ -0.27
PDPN-208ENST00000509009 SMG5Q9UPR3 1016 aaKnown RBP13.37□□□□□ -0.27
PDPN-208ENST00000509009 NME7Q9Y5B8 376 aa13.37□□□□□ -0.27
PDPN-208ENST00000509009 K7ESF4 209 aa13.36□□□□□ -0.27
PDPN-208ENST00000509009 HRO43593 1189 aa13.36□□□□□ -0.27
PDPN-208ENST00000509009 PAPSS2O95340 614 aaPredicted RBP13.36□□□□□ -0.27
PDPN-208ENST00000509009 ARSAP15289 507 aa13.36□□□□□ -0.27
PDPN-208ENST00000509009 GRIK1P39086 918 aa13.36□□□□□ -0.27
PDPN-208ENST00000509009 MYL6P60660 151 aa13.36□□□□□ -0.27
PDPN-208ENST00000509009 DMWDQ09019 674 aa13.36□□□□□ -0.27
PDPN-208ENST00000509009 STK4Q13043 487 aa13.36□□□□□ -0.27
PDPN-208ENST00000509009 MAPRE1Q15691 268 aaKnown RBP13.36□□□□□ -0.27
PDPN-208ENST00000509009 WDR72Q3MJ13 1102 aa13.36□□□□□ -0.27
PDPN-208ENST00000509009 CC2D1AQ6P1N0 951 aaPredicted RBP13.36□□□□□ -0.27
PDPN-208ENST00000509009 ERMP1Q7Z2K6 904 aa13.36□□□□□ -0.27
PDPN-208ENST00000509009 CEP57L1Q8IYX8 460 aa13.36□□□□□ -0.27
PDPN-208ENST00000509009 PLEKHO2Q8TD55 490 aa13.36□□□□□ -0.27
PDPN-208ENST00000509009 MYLPFQ96A32 169 aa13.36□□□□□ -0.27
PDPN-208ENST00000509009 CHFRQ96EP1 664 aa13.36□□□□□ -0.27
PDPN-208ENST00000509009 XYLT2Q9H1B5 865 aa13.36□□□□□ -0.27
PDPN-208ENST00000509009 SNX25Q9H3E2 840 aa13.36□□□□□ -0.27
PDPN-208ENST00000509009 FBRSL1Q9HCM7 1045 aaKnown RBP13.36□□□□□ -0.27
PDPN-208ENST00000509009 DMAC2Q9NW81 257 aa13.36□□□□□ -0.27
PDPN-208ENST00000509009 TRAV19A0A0A6YYK7 116 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 C2orf78A6NCI8 922 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 CHURC1-FNTBB4DL54 471 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 TRDMT1O14717 391 aaKnown RBP13.35□□□□□ -0.27
PDPN-208ENST00000509009 ACTN4O43707 911 aaKnown RBP13.35□□□□□ -0.27
PDPN-208ENST00000509009 EXOC3O60645 756 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 STAU1O95793 577 aaKnown RBP13.35□□□□□ -0.27
PDPN-208ENST00000509009 USP17L7P0C7H9 530 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 PTPN1P18031 435 aaKnown RBP13.35□□□□□ -0.27
PDPN-208ENST00000509009 HDCP19113 662 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 TGM1P22735 817 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 CMA1P23946 247 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 HOXA6P31267 233 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 HOXC13P31276 330 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 FNTBP49356 437 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 CASP4P49662 377 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 GALK1P51570 392 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 USP46P62068 366 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 CYP27A1Q02318 531 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 FAM160A1Q05DH4 1040 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 PSMD2Q13200 908 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 TRPC3Q13507 836 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 PDGFRLQ15198 375 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 TMEM196Q5HYL7 178 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 MDH1BQ5I0G3 518 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 FSTL4Q6MZW2 842 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 GPR161Q8N6U8 529 aaKnown RBP13.35□□□□□ -0.27
PDPN-208ENST00000509009 ARL14EPQ8N8R7 260 aaPredicted RBP13.35□□□□□ -0.27
PDPN-208ENST00000509009 FSIP1Q8NA03 581 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 OR6B3Q8NGW1 331 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 PARD3BQ8TEW8 1205 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 PCED1BQ96HM7 432 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 CEP295NLQ96MC4 621 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 TRPC7Q9HCX4 862 aa13.35□□□□□ -0.27
PDPN-208ENST00000509009 NUP210Q8TEM1 1887 aaPredicted RBP13.34□□□□□ -0.27
PDPN-208ENST00000509009 A0A1B0GVL5 298 aa13.34□□□□□ -0.27
PDPN-208ENST00000509009 ATICP31939 592 aa13.34□□□□□ -0.27
PDPN-208ENST00000509009 CLDN10P78369 228 aa13.34□□□□□ -0.27
PDPN-208ENST00000509009 AMPD2Q01433 879 aa13.34□□□□□ -0.27
PDPN-208ENST00000509009 GRSF1Q12849 480 aaKnown RBP eCLIP13.34□□□□□ -0.27
PDPN-208ENST00000509009 KMT5BQ4FZB7 885 aa13.34□□□□□ -0.27
PDPN-208ENST00000509009 HEATR6Q6AI08 1181 aaKnown RBP13.34□□□□□ -0.27
PDPN-208ENST00000509009 DENND5BQ6ZUT9 1274 aa13.34□□□□□ -0.27
PDPN-208ENST00000509009 GOLGA5Q8TBA6 731 aa13.34□□□□□ -0.27
PDPN-208ENST00000509009 TMEM174Q8WUU8 243 aa13.34□□□□□ -0.27
PDPN-208ENST00000509009 SECISBP2LQ93073 1101 aaKnown RBP13.34□□□□□ -0.27
PDPN-208ENST00000509009 CHAMP1Q96JM3 812 aa13.34□□□□□ -0.27
PDPN-208ENST00000509009 C8orf48Q96LL4 319 aa13.34□□□□□ -0.27
PDPN-208ENST00000509009 TTLL2Q9BWV7 592 aa13.34□□□□□ -0.27
PDPN-208ENST00000509009 LINC00597Q9H2U6 94 aa13.34□□□□□ -0.27
PDPN-208ENST00000509009 DUS2Q9NX74 493 aaKnown RBP13.34□□□□□ -0.27
PDPN-208ENST00000509009 DLL3Q9NYJ7 618 aa13.34□□□□□ -0.27
PDPN-208ENST00000509009 NXF1Q9UBU9 619 aaKnown RBP13.34□□□□□ -0.27
PDPN-208ENST00000509009 ZDHHC9Q9Y397 364 aa13.34□□□□□ -0.27
PDPN-208ENST00000509009 DENND4CQ5VZ89 1909 aa13.33□□□□□ -0.28
PDPN-208ENST00000509009 ZNF840PA6NDX5 716 aa13.33□□□□□ -0.28
PDPN-208ENST00000509009 F8VP50 259 aa13.33□□□□□ -0.28
PDPN-208ENST00000509009 PHACTR2O75167 634 aa13.33□□□□□ -0.28
PDPN-208ENST00000509009 C4BPAP04003 597 aaKnown RBP13.33□□□□□ -0.28
PDPN-208ENST00000509009 CKMP06732 381 aa13.33□□□□□ -0.28
PDPN-208ENST00000509009 TCF3P15923 654 aa13.33□□□□□ -0.28
PDPN-208ENST00000509009 PFKFB1P16118 471 aa13.33□□□□□ -0.28
PDPN-208ENST00000509009 ANXA13P27216 316 aa13.33□□□□□ -0.28
PDPN-208ENST00000509009 CNR2P34972 360 aa13.33□□□□□ -0.28
PDPN-208ENST00000509009 GJA4P35212 333 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms