RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 POMGNT1Q8WZA1 660 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 KAT5Q92993 513 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 BTBD6Q96KE9 485 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 FBXL18Q96ME1 805 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 FNBP1Q96RU3 617 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 CYTH2Q99418 400 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 P2RX7Q99572 595 aaKnown RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 POP1Q99575 1024 aaKnown RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 ZNF184Q99676 751 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 CENPKQ9BS16 269 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 TSSK1BQ9BXA7 367 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 MIS12Q9H081 205 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 IQCGQ9H095 443 aaKnown RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 WWP1Q9H0M0 922 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 FAM96AQ9H5X1 160 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 DENND2DQ9H6A0 471 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 ACSS3Q9H6R3 686 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 GPAMQ9HCL2 828 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 NPHS2Q9NP85 383 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 KMT5AQ9NQR1 393 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 DNAJC17Q9NVM6 304 aaKnown RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 NMRK1Q9NWW6 199 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 TMOD2Q9NZR1 351 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 NDUFA13Q9P0J0 144 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 DLGAP2Q9P1A6 1054 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 NKX1-2Q9UD57 310 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 PPP1R1BQ9UD71 204 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 SERPINA10Q9UK55 444 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 FEM1BQ9UK73 627 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 SORCS3Q9UPU3 1222 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 SSX2IPQ9Y2D8 614 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 PCDHB9Q9Y5E1 797 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 SLC4A7Q9Y6M7 1214 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 UMODL1Q5DID0 1318 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 MYPNQ86TC9 1320 aa5.21□□□□□ -1.58
HMGB3P16-201ENST00000508037 LRRC37AA6NMS7 1700 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 CFAP69A5D8W1 941 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 WDR64B1ANS9 1081 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 SPECC1L-ADORA2AF8WAN1 911 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 H0Y3Z8 333 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 SGK1O00141 431 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 PDLIM1O00151 329 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 TERTO14746 1132 aaKnown RBP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 CAPN9O14815 690 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 HGSO14964 777 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 SLC16A4O15374 487 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 GSC2O15499 205 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 EXTL3O43909 919 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 MAN1A2O60476 641 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 LPXNO60711 386 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 FKBP6O75344 327 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 CSDE1O75534 798 aaKnown RBP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 KRT37O76014 449 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 RTN3O95197 1032 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 CBX6O95503 412 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 LDHAP00338 332 aaKnown RBP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 ADRB2P07550 413 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 INHBAP08476 426 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 FBXO45P0C2W1 286 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 ARP10275 920 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 NPR1P16066 1061 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 ATF7P17544 494 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 ADSSP30520 456 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 PGM1P36871 562 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 PIK3CAP42336 1068 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 SCNN1DP51172 638 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 HSD17B4P51659 736 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 RBM5P52756 815 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 CACNA2D1P54289 1103 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 PEX3P56589 373 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 SNAP25P60880 206 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 YWHAEP62258 255 aaKnown RBP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 CLDN10P78369 228 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 PLCB3Q01970 1234 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 ADCY1Q08828 1119 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 BIRC2Q13490 618 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 MAMLD1Q13495 774 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 PSMD6Q15008 389 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 VPS72Q15906 364 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 HADHQ16836 314 aaKnown RBP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 GNPTABQ3T906 1256 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 XKR9Q5GH70 373 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 SH2D4BQ5SQS7 431 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 TMEM63BQ5T3F8 832 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 FAM102BQ5T8I3 360 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 RNASEH2BQ5TBB1 312 aaKnown RBP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 MAP3K21Q5TCX8 1036 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 STRIP1Q5VSL9 837 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 SLFN12LQ6IEE8 588 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 AAGABQ6PD74 315 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 SPOCD1Q6ZMY3 1216 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 SV2AQ7L0J3 742 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 NET1Q7Z628 596 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 ZC3H18Q86VM9 953 aaKnown RBP5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 CBWD2Q8IUF1 395 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 SIAH1Q8IUQ4 282 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 PALM2Q8IXS6 379 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 SEPT12Q8IYM1 358 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 THNSL1Q8IYQ7 743 aa5.2□□□□□ -1.58
HMGB3P16-201ENST00000508037 SCYL3Q8IZE3 742 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms