RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 TMEM120BA0PK00 339 aa15.24■□□□□ 0.03
DDX41-208ENST00000507955 MCF2P10911 925 aa15.24■□□□□ 0.03
DDX41-208ENST00000507955 MIPP30301 263 aa15.24■□□□□ 0.03
DDX41-208ENST00000507955 MAGEA4P43358 317 aa15.24■□□□□ 0.03
DDX41-208ENST00000507955 OASLQ15646 514 aaKnown RBP15.24■□□□□ 0.03
DDX41-208ENST00000507955 NPNTQ6UXI9 565 aa15.24■□□□□ 0.03
DDX41-208ENST00000507955 ANKMY2Q8IV38 441 aa15.24■□□□□ 0.03
DDX41-208ENST00000507955 CCDC197Q8NCU1 140 aa15.24■□□□□ 0.03
DDX41-208ENST00000507955 PEBP4Q96S96 227 aa15.24■□□□□ 0.03
DDX41-208ENST00000507955 APOL6Q9BWW8 343 aa15.24■□□□□ 0.03
DDX41-208ENST00000507955 CALN1Q9BXU9 219 aa15.24■□□□□ 0.03
DDX41-208ENST00000507955 EIF2AQ9BY44 585 aaKnown RBP15.24■□□□□ 0.03
DDX41-208ENST00000507955 HOMER3Q9NSC5 361 aa15.24■□□□□ 0.03
DDX41-208ENST00000507955 SNTG2Q9NY99 539 aa15.24■□□□□ 0.03
DDX41-208ENST00000507955 SCN1AP35498 2009 aa15.24■□□□□ 0.03
DDX41-208ENST00000507955 CCT8L1PA6NM43 557 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 CETN2P41208 172 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 CNGA2Q16280 664 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 ANKRD22Q5VYY1 191 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 VSTM1Q6UX27 236 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 GPR142Q7Z601 462 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 SRRM1Q8IYB3 904 aaKnown RBP15.23■□□□□ 0.03
DDX41-208ENST00000507955 C18orf25Q96B23 403 aaPredicted RBP15.23■□□□□ 0.03
DDX41-208ENST00000507955 ACAP3Q96P50 834 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 TMEM109Q9BVC6 243 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 KDM4CQ9H3R0 1056 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.23■□□□□ 0.03
DDX41-208ENST00000507955 GGT7Q9UJ14 662 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 GJD2Q9UKL4 321 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.23■□□□□ 0.03
DDX41-208ENST00000507955 NAALADL1Q9UQQ1 740 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 NME7Q9Y5B8 376 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 E5RJQ4 531 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 NPTXRO95502 500 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 VIMP08670 466 aaKnown RBP15.23■□□□□ 0.03
DDX41-208ENST00000507955 VCPP55072 806 aaKnown RBP15.23■□□□□ 0.03
DDX41-208ENST00000507955 ATP11AP98196 1134 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 XRCC4Q13426 336 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 NPLOC4Q8TAT6 608 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 ZC3H15Q8WU90 426 aaKnown RBP15.23■□□□□ 0.03
DDX41-208ENST00000507955 ELAC2Q9BQ52 826 aaKnown RBP15.23■□□□□ 0.03
DDX41-208ENST00000507955 MRPL45Q9BRJ2 306 aaKnown RBP15.23■□□□□ 0.03
DDX41-208ENST00000507955 LHX5Q9H2C1 402 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 YY1AP1Q9H869 796 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 TSPAN16Q9UKR8 245 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 PLXNA1Q9UIW2 1896 aa15.23■□□□□ 0.03
DDX41-208ENST00000507955 DNALI1O14645 258 aaPredicted RBP15.22■□□□□ 0.03
DDX41-208ENST00000507955 MED7O43513 233 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 KDELR1P24390 212 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 ACOT1Q86TX2 421 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 PARP9Q8IXQ6 854 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 ZBED8Q8IZ13 594 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 KCTD6Q8NC69 237 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 SHCBP1Q8NEM2 672 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 SGSM3Q96HU1 749 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 L3MBTL3Q96JM7 780 aaPredicted RBP15.22■□□□□ 0.03
DDX41-208ENST00000507955 OSMRQ99650 979 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 PTPN18Q99952 460 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 NFKBIZQ9BYH8 718 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 MAGEB5Q9BZ81 275 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 KIF9Q9HAQ2 790 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 TUBGCP4Q9UGJ1 667 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 STRIP2Q9ULQ0 834 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 TPX2Q9ULW0 747 aaKnown RBP15.22■□□□□ 0.03
DDX41-208ENST00000507955 SNX9Q9Y5X1 595 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 KAT6AQ92794 2004 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 HTTP42858 3142 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 A0A1B0GUA9 196 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 TCRBV7S3A2A0A539 114 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 POC1B-GALNT4F8VUJ3 575 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 CHUKO15111 745 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 MMP3P08254 477 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 AKAP5P24588 427 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 HIC1Q14526 733 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 PPP1R26Q5T8A7 1209 aaPredicted RBP15.22■□□□□ 0.03
DDX41-208ENST00000507955 LRRC38Q5VT99 294 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 OR6B2Q6IFH4 312 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 MFSD5Q6N075 450 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 UNC45BQ8IWX7 931 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 NIPA2Q8N8Q9 360 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 CFAP57Q96MR6 1250 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 ADPGKQ9BRR6 497 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 B3GNT5Q9BYG0 378 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 GPATCH2LQ9NWQ4 482 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 PNMA3Q9UL41 463 aa15.22■□□□□ 0.03
DDX41-208ENST00000507955 DOCK3Q8IZD9 2030 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 MAGEB2O15479 319 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 DYNC1LI2O43237 492 aaPredicted RBP15.21■□□□□ 0.03
DDX41-208ENST00000507955 PFKMP08237 780 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 HOXA11P31270 313 aaPredicted RBP15.21■□□□□ 0.03
DDX41-208ENST00000507955 GSCP56915 257 aaPredicted RBP15.21■□□□□ 0.03
DDX41-208ENST00000507955 CCNA1P78396 465 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 TMED2Q15363 201 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 FAM187BQ17R55 369 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 MSS51Q4VC12 460 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 ZC3H18Q86VM9 953 aaKnown RBP15.21■□□□□ 0.03
DDX41-208ENST00000507955 SCUBE3Q8IX30 993 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 ZCCHC9Q8N567 271 aaKnown RBP15.21■□□□□ 0.03
DDX41-208ENST00000507955 CCDC33Q8N5R6 958 aa15.21■□□□□ 0.03
DDX41-208ENST00000507955 OR6J1Q8NGC5 347 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms