RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 CC2D1AQ6P1N0 951 aaPredicted RBP22.26■■□□□ 1.15
CLDND1-216ENST00000507944 Q6ZS52 159 aa22.26■■□□□ 1.15
CLDND1-216ENST00000507944 MRPL45Q9BRJ2 306 aaKnown RBP22.26■■□□□ 1.15
CLDND1-216ENST00000507944 SNX25Q9H3E2 840 aa22.26■■□□□ 1.15
CLDND1-216ENST00000507944 EBF3Q9H4W6 596 aa22.26■■□□□ 1.15
CLDND1-216ENST00000507944 TRPC7Q9HCX4 862 aa22.26■■□□□ 1.15
CLDND1-216ENST00000507944 HPS4Q9NQG7 708 aa22.26■■□□□ 1.15
CLDND1-216ENST00000507944 SMG5Q9UPR3 1016 aaKnown RBP22.26■■□□□ 1.15
CLDND1-216ENST00000507944 PTPRDP23468 1912 aa22.25■■□□□ 1.15
CLDND1-216ENST00000507944 ACTN4O43707 911 aaKnown RBP22.25■■□□□ 1.15
CLDND1-216ENST00000507944 KLRC4O43908 158 aa22.25■■□□□ 1.15
CLDND1-216ENST00000507944 TACC1O75410 805 aa22.25■■□□□ 1.15
CLDND1-216ENST00000507944 GRIK1P39086 918 aa22.25■■□□□ 1.15
CLDND1-216ENST00000507944 CYP27A1Q02318 531 aa22.25■■□□□ 1.15
CLDND1-216ENST00000507944 TRPC3Q13507 836 aa22.25■■□□□ 1.15
CLDND1-216ENST00000507944 CCINQ13939 588 aa22.25■■□□□ 1.15
CLDND1-216ENST00000507944 WDR72Q3MJ13 1102 aa22.25■■□□□ 1.15
CLDND1-216ENST00000507944 TRIM68Q6AZZ1 485 aa22.25■■□□□ 1.15
CLDND1-216ENST00000507944 SYNPOQ8N3V7 929 aa22.25■■□□□ 1.15
CLDND1-216ENST00000507944 FSIP1Q8NA03 581 aa22.25■■□□□ 1.15
CLDND1-216ENST00000507944 OR6B3Q8NGW1 331 aa22.25■■□□□ 1.15
CLDND1-216ENST00000507944 RIN3Q8TB24 985 aa22.25■■□□□ 1.15
CLDND1-216ENST00000507944 GOLGA5Q8TBA6 731 aa22.25■■□□□ 1.15
CLDND1-216ENST00000507944 MYCBPAPQ8TBZ2 947 aa22.25■■□□□ 1.15
CLDND1-216ENST00000507944 PAGE5Q96GU1 130 aa22.25■■□□□ 1.15
CLDND1-216ENST00000507944 SPATA17Q96L03 361 aa22.25■■□□□ 1.15
CLDND1-216ENST00000507944 CYP2S1Q96SQ9 504 aa22.25■■□□□ 1.15
CLDND1-216ENST00000507944 GZF1Q9H116 711 aaPredicted RBP22.25■■□□□ 1.15
CLDND1-216ENST00000507944 SDK1Q7Z5N4 2213 aa22.25■■□□□ 1.15
CLDND1-216ENST00000507944 TRAV19A0A0A6YYK7 116 aa22.24■■□□□ 1.15
CLDND1-216ENST00000507944 USP17L7P0C7H9 530 aa22.24■■□□□ 1.15
CLDND1-216ENST00000507944 MYL6P60660 151 aa22.24■■□□□ 1.15
CLDND1-216ENST00000507944 TNNC1P63316 161 aa22.24■■□□□ 1.15
CLDND1-216ENST00000507944 FAM160A1Q05DH4 1040 aa22.24■■□□□ 1.15
CLDND1-216ENST00000507944 STK4Q13043 487 aa22.24■■□□□ 1.15
CLDND1-216ENST00000507944 SECISBP2LQ93073 1101 aaKnown RBP22.24■■□□□ 1.15
CLDND1-216ENST00000507944 PCED1BQ96HM7 432 aa22.24■■□□□ 1.15
CLDND1-216ENST00000507944 CEP295NLQ96MC4 621 aa22.24■■□□□ 1.15
CLDND1-216ENST00000507944 SLC22A12Q96S37 553 aa22.24■■□□□ 1.15
CLDND1-216ENST00000507944 EXOC1Q9NV70 894 aa22.24■■□□□ 1.15
CLDND1-216ENST00000507944 NME7Q9Y5B8 376 aa22.24■■□□□ 1.15
CLDND1-216ENST00000507944 A0A1B0GVL5 298 aa22.23■■□□□ 1.15
CLDND1-216ENST00000507944 OTOL1A6NHN0 477 aaPredicted RBP22.23■■□□□ 1.15
CLDND1-216ENST00000507944 PHACTR2O75167 634 aa22.23■■□□□ 1.15
CLDND1-216ENST00000507944 PAPSS2O95340 614 aaPredicted RBP22.23■■□□□ 1.15
CLDND1-216ENST00000507944 STAU1O95793 577 aaKnown RBP22.23■■□□□ 1.15
CLDND1-216ENST00000507944 ARSAP15289 507 aa22.23■■□□□ 1.15
CLDND1-216ENST00000507944 CMA1P23946 247 aa22.23■■□□□ 1.15
CLDND1-216ENST00000507944 ANXA13P27216 316 aa22.23■■□□□ 1.15
CLDND1-216ENST00000507944 ATICP31939 592 aa22.23■■□□□ 1.15
CLDND1-216ENST00000507944 FOXK2Q01167 660 aa22.23■■□□□ 1.15
CLDND1-216ENST00000507944 PSMD2Q13200 908 aa22.23■■□□□ 1.15
CLDND1-216ENST00000507944 PDGFRLQ15198 375 aa22.23■■□□□ 1.15
CLDND1-216ENST00000507944 MDH1BQ5I0G3 518 aa22.23■■□□□ 1.15
CLDND1-216ENST00000507944 GCNT4Q9P109 453 aa22.23■■□□□ 1.15
CLDND1-216ENST00000507944 CKMP06732 381 aa22.22■■□□□ 1.15
CLDND1-216ENST00000507944 PFKFB1P16118 471 aa22.22■■□□□ 1.15
CLDND1-216ENST00000507944 PTPN1P18031 435 aaKnown RBP22.22■■□□□ 1.15
CLDND1-216ENST00000507944 CASP4P49662 377 aa22.22■■□□□ 1.15
CLDND1-216ENST00000507944 AMPD2Q01433 879 aa22.22■■□□□ 1.15
CLDND1-216ENST00000507944 MTF1Q14872 753 aa22.22■■□□□ 1.15
CLDND1-216ENST00000507944 KMT5BQ4FZB7 885 aa22.22■■□□□ 1.15
CLDND1-216ENST00000507944 TMEM196Q5HYL7 178 aa22.22■■□□□ 1.15
CLDND1-216ENST00000507944 DENND5BQ6ZUT9 1274 aa22.22■■□□□ 1.15
CLDND1-216ENST00000507944 ARL14EPQ8N8R7 260 aaPredicted RBP22.22■■□□□ 1.15
CLDND1-216ENST00000507944 KIAA0895Q8NCT3 520 aa22.22■■□□□ 1.15
CLDND1-216ENST00000507944 TTC16Q8NEE8 873 aa22.22■■□□□ 1.15
CLDND1-216ENST00000507944 PLEKHO2Q8TD55 490 aa22.22■■□□□ 1.15
CLDND1-216ENST00000507944 SYAP1Q96A49 352 aaPredicted RBP22.22■■□□□ 1.15
CLDND1-216ENST00000507944 RMDN1Q96DB5 314 aa22.22■■□□□ 1.15
CLDND1-216ENST00000507944 XYLT2Q9H1B5 865 aa22.22■■□□□ 1.15
CLDND1-216ENST00000507944 C2orf42Q9NWW7 574 aa22.22■■□□□ 1.15
CLDND1-216ENST00000507944 NXF1Q9UBU9 619 aaKnown RBP22.22■■□□□ 1.15
CLDND1-216ENST00000507944 USP25Q9UHP3 1055 aa22.22■■□□□ 1.15
CLDND1-216ENST00000507944 C2orf78A6NCI8 922 aa22.21■■□□□ 1.15
CLDND1-216ENST00000507944 A8MXQ7 604 aa22.21■■□□□ 1.15
CLDND1-216ENST00000507944 CHURC1-FNTBB4DL54 471 aa22.21■■□□□ 1.15
CLDND1-216ENST00000507944 K7ESF4 209 aa22.21■■□□□ 1.15
CLDND1-216ENST00000507944 TRDMT1O14717 391 aaKnown RBP22.21■■□□□ 1.15
CLDND1-216ENST00000507944 TRIM66O15016 1216 aa22.21■■□□□ 1.15
CLDND1-216ENST00000507944 HDCP19113 662 aa22.21■■□□□ 1.15
CLDND1-216ENST00000507944 FNTBP49356 437 aa22.21■■□□□ 1.15
CLDND1-216ENST00000507944 DMWDQ09019 674 aa22.21■■□□□ 1.15
CLDND1-216ENST00000507944 GRSF1Q12849 480 aaKnown RBP eCLIP22.21■■□□□ 1.15
CLDND1-216ENST00000507944 ZNF77Q15935 545 aa22.21■■□□□ 1.15
CLDND1-216ENST00000507944 ERMP1Q7Z2K6 904 aa22.21■■□□□ 1.15
CLDND1-216ENST00000507944 GPR161Q8N6U8 529 aaKnown RBP22.21■■□□□ 1.15
CLDND1-216ENST00000507944 PARD3BQ8TEW8 1205 aa22.21■■□□□ 1.15
CLDND1-216ENST00000507944 CHFRQ96EP1 664 aa22.21■■□□□ 1.15
CLDND1-216ENST00000507944 SPATA32Q96LK8 384 aa22.21■■□□□ 1.15
CLDND1-216ENST00000507944 C8orf48Q96LL4 319 aa22.21■■□□□ 1.15
CLDND1-216ENST00000507944 DMAC2Q9NW81 257 aa22.21■■□□□ 1.15
CLDND1-216ENST00000507944 DUS2Q9NX74 493 aaKnown RBP22.21■■□□□ 1.15
CLDND1-216ENST00000507944 RAB23Q9ULC3 237 aa22.21■■□□□ 1.15
CLDND1-216ENST00000507944 DCHS1Q96JQ0 3298 aa22.21■■□□□ 1.15
CLDND1-216ENST00000507944 F8VP50 259 aa22.2■■□□□ 1.14
CLDND1-216ENST00000507944 AP3M2P53677 418 aa22.2■■□□□ 1.14
CLDND1-216ENST00000507944 USP46P62068 366 aa22.2■■□□□ 1.14
CLDND1-216ENST00000507944 BIRC3Q13489 604 aa22.2■■□□□ 1.14
CLDND1-216ENST00000507944 KCNB1Q14721 858 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms