RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 COL6A3P12111 3177 aa15.02■□□□□ -0
RNF4-208ENST00000507247 TULP2O00295 520 aa15.02■□□□□ -0
RNF4-208ENST00000507247 ZNF263O14978 683 aa15.02■□□□□ -0
RNF4-208ENST00000507247 BEST1O76090 585 aa15.02■□□□□ -0
RNF4-208ENST00000507247 UNGP13051 313 aaPredicted RBP15.02■□□□□ -0
RNF4-208ENST00000507247 CYP2F1P24903 491 aa15.02■□□□□ -0
RNF4-208ENST00000507247 CDH5P33151 784 aaPredicted RBP15.02■□□□□ -0
RNF4-208ENST00000507247 GPD2P43304 727 aa15.02■□□□□ -0
RNF4-208ENST00000507247 BCAT1P54687 386 aa15.02■□□□□ -0
RNF4-208ENST00000507247 NOMO3P69849 1222 aa15.02■□□□□ -0
RNF4-208ENST00000507247 GFPT1Q06210 699 aaPredicted RBP15.02■□□□□ -0
RNF4-208ENST00000507247 PDE4CQ08493 712 aa15.02■□□□□ -0
RNF4-208ENST00000507247 ADCY1Q08828 1119 aa15.02■□□□□ -0
RNF4-208ENST00000507247 CLEC16AQ2KHT3 1053 aa15.02■□□□□ -0
RNF4-208ENST00000507247 CFAP221Q4G0U5 840 aa15.02■□□□□ -0
RNF4-208ENST00000507247 PDE12Q6L8Q7 609 aaKnown RBP15.02■□□□□ -0
RNF4-208ENST00000507247 CLEC20AQ6ZU45 233 aa15.02■□□□□ -0
RNF4-208ENST00000507247 ADGRD2Q7Z7M1 963 aa15.02■□□□□ -0
RNF4-208ENST00000507247 DNAAF5Q86Y56 855 aa15.02■□□□□ -0
RNF4-208ENST00000507247 ANKRD52Q8NB46 1076 aa15.02■□□□□ -0
RNF4-208ENST00000507247 C1orf131Q8NDD1 294 aaKnown RBP15.02■□□□□ -0
RNF4-208ENST00000507247 ZMIZ2Q8NF64 920 aa15.02■□□□□ -0
RNF4-208ENST00000507247 ZNF461Q8TAF7 563 aa15.02■□□□□ -0
RNF4-208ENST00000507247 SECISBP2LQ93073 1101 aaKnown RBP15.02■□□□□ -0
RNF4-208ENST00000507247 SMARCD1Q96GM5 515 aa15.02■□□□□ -0
RNF4-208ENST00000507247 FUBP3Q96I24 572 aaKnown RBP eCLIP15.02■□□□□ -0
RNF4-208ENST00000507247 CCDC42Q96M95 316 aa15.02■□□□□ -0
RNF4-208ENST00000507247 FAM161BQ96MY7 647 aa15.02■□□□□ -0
RNF4-208ENST00000507247 SMOQ99835 787 aa15.02■□□□□ -0
RNF4-208ENST00000507247 DUSP16Q9BY84 665 aa15.02■□□□□ -0
RNF4-208ENST00000507247 LHX5Q9H2C1 402 aa15.02■□□□□ -0
RNF4-208ENST00000507247 PDCL3Q9H2J4 239 aa15.02■□□□□ -0
RNF4-208ENST00000507247 DEF6Q9H4E7 631 aa15.02■□□□□ -0
RNF4-208ENST00000507247 SPTLC3Q9NUV7 552 aa15.02■□□□□ -0
RNF4-208ENST00000507247 TAS2R14Q9NYV8 317 aa15.02■□□□□ -0
RNF4-208ENST00000507247 PCDHB5Q9Y5E4 795 aa15.02■□□□□ -0
RNF4-208ENST00000507247 MYO7AQ13402 2215 aa15.02□□□□□ -0.01
RNF4-208ENST00000507247 MYO9BQ13459 2157 aa15.02□□□□□ -0.01
RNF4-208ENST00000507247 ATP8B3O60423 1300 aa15.01□□□□□ -0.01
RNF4-208ENST00000507247 AKR1B10O60218 316 aa15.01□□□□□ -0.01
RNF4-208ENST00000507247 AP1G2O75843 785 aa15.01□□□□□ -0.01
RNF4-208ENST00000507247 SEC24AO95486 1093 aa15.01□□□□□ -0.01
RNF4-208ENST00000507247 FAM200BP0CF97 657 aa15.01□□□□□ -0.01
RNF4-208ENST00000507247 NPR3P17342 541 aa15.01□□□□□ -0.01
RNF4-208ENST00000507247 ANXA13P27216 316 aa15.01□□□□□ -0.01
RNF4-208ENST00000507247 BST2Q10589 180 aaKnown RBP15.01□□□□□ -0.01
RNF4-208ENST00000507247 SMARCB1Q12824 385 aa15.01□□□□□ -0.01
RNF4-208ENST00000507247 SLC18A3Q16572 532 aa15.01□□□□□ -0.01
RNF4-208ENST00000507247 NAA35Q5VZE5 725 aa15.01□□□□□ -0.01
RNF4-208ENST00000507247 TPGS2Q68CL5 300 aa15.01□□□□□ -0.01
RNF4-208ENST00000507247 TRIM72Q6ZMU5 477 aa15.01□□□□□ -0.01
RNF4-208ENST00000507247 VPS36Q86VN1 386 aa15.01□□□□□ -0.01
RNF4-208ENST00000507247 CCDC170Q8IYT3 715 aa15.01□□□□□ -0.01
RNF4-208ENST00000507247 SPPL2BQ8TCT7 592 aa15.01□□□□□ -0.01
RNF4-208ENST00000507247 CPA5Q8WXQ8 436 aa15.01□□□□□ -0.01
RNF4-208ENST00000507247 KCNK16Q96T55 309 aa15.01□□□□□ -0.01
RNF4-208ENST00000507247 EMILIN2Q9BXX0 1053 aa15.01□□□□□ -0.01
RNF4-208ENST00000507247 ABCB6Q9NP58 842 aa15.01□□□□□ -0.01
RNF4-208ENST00000507247 HESX1Q9UBX0 185 aa15.01□□□□□ -0.01
RNF4-208ENST00000507247 AFF4Q9UHB7 1163 aaKnown RBP15.01□□□□□ -0.01
RNF4-208ENST00000507247 SLC27A5Q9Y2P5 690 aa15.01□□□□□ -0.01
RNF4-208ENST00000507247 LAMA2P24043 3122 aaKnown RBP15□□□□□ -0.01
RNF4-208ENST00000507247 MYO16Q9Y6X6 1858 aa15□□□□□ -0.01
RNF4-208ENST00000507247 TMEM265A0A087WTH1 108 aa15□□□□□ -0.01
RNF4-208ENST00000507247 TMCO5BA8MYB1 307 aa15□□□□□ -0.01
RNF4-208ENST00000507247 HHLA1C9JL84 531 aa15□□□□□ -0.01
RNF4-208ENST00000507247 TGM5O43548 720 aa15□□□□□ -0.01
RNF4-208ENST00000507247 CLASP2O75122 1294 aaKnown RBP15□□□□□ -0.01
RNF4-208ENST00000507247 SOAT2O75908 522 aa15□□□□□ -0.01
RNF4-208ENST00000507247 NDUFA10O95299 355 aa15□□□□□ -0.01
RNF4-208ENST00000507247 LSM8O95777 96 aaKnown RBP15□□□□□ -0.01
RNF4-208ENST00000507247 ADH1AP07327 375 aa15□□□□□ -0.01
RNF4-208ENST00000507247 SETSIPP0DME0 302 aa15□□□□□ -0.01
RNF4-208ENST00000507247 ATF2P15336 505 aa15□□□□□ -0.01
RNF4-208ENST00000507247 KLRC2P26717 231 aa15□□□□□ -0.01
RNF4-208ENST00000507247 CYLC1P35663 651 aaPredicted RBP15□□□□□ -0.01
RNF4-208ENST00000507247 GPR15P49685 360 aa15□□□□□ -0.01
RNF4-208ENST00000507247 MAP3K7CLP57077 242 aa15□□□□□ -0.01
RNF4-208ENST00000507247 CENPCQ03188 943 aa15□□□□□ -0.01
RNF4-208ENST00000507247 DUSP4Q13115 394 aa15□□□□□ -0.01
RNF4-208ENST00000507247 PMF1Q6P1K2 205 aa15□□□□□ -0.01
RNF4-208ENST00000507247 LILRA6Q6PI73 481 aa15□□□□□ -0.01
RNF4-208ENST00000507247 TMEM35BQ8NCS4 154 aa15□□□□□ -0.01
RNF4-208ENST00000507247 C2orf15Q8WU43 125 aaKnown RBP15□□□□□ -0.01
RNF4-208ENST00000507247 SLC35F5Q8WV83 523 aa15□□□□□ -0.01
RNF4-208ENST00000507247 MRPL38Q96DV4 380 aaKnown RBP15□□□□□ -0.01
RNF4-208ENST00000507247 GUCD1Q96NT3 240 aa15□□□□□ -0.01
RNF4-208ENST00000507247 CSNK1G1Q9HCP0 422 aa15□□□□□ -0.01
RNF4-208ENST00000507247 TJP2Q9UDY2 1190 aa15□□□□□ -0.01
RNF4-208ENST00000507247 NAGPAQ9UK23 515 aa15□□□□□ -0.01
RNF4-208ENST00000507247 EPN1Q9Y6I3 576 aaPredicted RBP15□□□□□ -0.01
RNF4-208ENST00000507247 ZNF638Q14966 1978 aaKnown RBP15□□□□□ -0.01
RNF4-208ENST00000507247 EIF3CLB5ME19 914 aaKnown RBP14.99□□□□□ -0.01
RNF4-208ENST00000507247 F8VP50 259 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 XPO1O14980 1071 aaKnown RBP14.99□□□□□ -0.01
RNF4-208ENST00000507247 ARHGAP6O43182 974 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 GABBR2O75899 941 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 LCA5LO95447 670 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 SPATA31D3P0C874 917 aa14.99□□□□□ -0.01
RNF4-208ENST00000507247 HAPLN1P10915 354 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms