RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 SNX9Q9Y5X1 595 aa14.36□□□□□ -0.11
DDX41-206ENST00000506965 MYH10P35580 1976 aa14.36□□□□□ -0.11
DDX41-206ENST00000506965 K7EQS6 105 aa14.35□□□□□ -0.11
DDX41-206ENST00000506965 SCAMP3O14828 347 aaKnown RBP14.35□□□□□ -0.11
DDX41-206ENST00000506965 GIPC1O14908 333 aa14.35□□□□□ -0.11
DDX41-206ENST00000506965 GCNT3O95395 438 aa14.35□□□□□ -0.11
DDX41-206ENST00000506965 BCKDHBP21953 392 aa14.35□□□□□ -0.11
DDX41-206ENST00000506965 MPLP40238 635 aa14.35□□□□□ -0.11
DDX41-206ENST00000506965 TSPY1Q01534 308 aa14.35□□□□□ -0.11
DDX41-206ENST00000506965 FAM160A1Q05DH4 1040 aa14.35□□□□□ -0.11
DDX41-206ENST00000506965 GRSF1Q12849 480 aaKnown RBP eCLIP14.35□□□□□ -0.11
DDX41-206ENST00000506965 TAF12Q16514 161 aa14.35□□□□□ -0.11
DDX41-206ENST00000506965 NFE2Q16621 373 aaPredicted RBP14.35□□□□□ -0.11
DDX41-206ENST00000506965 ST3GAL2Q16842 350 aa14.35□□□□□ -0.11
DDX41-206ENST00000506965 CFAP221Q4G0U5 840 aa14.35□□□□□ -0.11
DDX41-206ENST00000506965 AASDHQ4L235 1098 aaPredicted RBP14.35□□□□□ -0.11
DDX41-206ENST00000506965 CBWD2Q8IUF1 395 aa14.35□□□□□ -0.11
DDX41-206ENST00000506965 ADGRF2Q8IZF7 708 aa14.35□□□□□ -0.11
DDX41-206ENST00000506965 RASSF8Q8NHQ8 419 aa14.35□□□□□ -0.11
DDX41-206ENST00000506965 SH3RF2Q8TEC5 729 aa14.35□□□□□ -0.11
DDX41-206ENST00000506965 MRPS31Q92665 395 aaKnown RBP14.35□□□□□ -0.11
DDX41-206ENST00000506965 MYLPFQ96A32 169 aa14.35□□□□□ -0.11
DDX41-206ENST00000506965 LOXL4Q96JB6 756 aa14.35□□□□□ -0.11
DDX41-206ENST00000506965 ACCSQ96QU6 501 aa14.35□□□□□ -0.11
DDX41-206ENST00000506965 SEL1LQ9UBV2 794 aa14.35□□□□□ -0.11
DDX41-206ENST00000506965 PCNX2A6NKB5 2137 aa14.35□□□□□ -0.11
DDX41-206ENST00000506965 CACNA1EQ15878 2313 aa14.35□□□□□ -0.11
DDX41-206ENST00000506965 VPS37CA5D8V6 355 aaPredicted RBP14.34□□□□□ -0.11
DDX41-206ENST00000506965 SOBPA7XYQ1 873 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 BMP15O95972 392 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 CCDC192P0DO97 292 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 DRD1P21728 446 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 GARTP22102 1010 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 KCNA4P22459 653 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 CEBPZQ03701 1054 aaKnown RBP14.34□□□□□ -0.11
DDX41-206ENST00000506965 DMC1Q14565 340 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 POSTNQ15063 836 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 PDGFRLQ15198 375 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 SYT13Q7L8C5 426 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 C12orf40Q86WS4 652 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 SCN4BQ8IWT1 228 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 TOP6BLQ8N6T0 577 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 TTC16Q8NEE8 873 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 CD101Q93033 1021 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 USP28Q96RU2 1077 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 RNF38Q9H0F5 515 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 INTS13Q9NVM9 706 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 DUS2Q9NX74 493 aaKnown RBP14.34□□□□□ -0.11
DDX41-206ENST00000506965 ZMYM5Q9UJ78 669 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 ITGA11Q9UKX5 1188 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 SLC8A2Q9UPR5 921 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 WASF3Q9UPY6 502 aa14.34□□□□□ -0.11
DDX41-206ENST00000506965 PCDH15Q96QU1 1955 aa14.33□□□□□ -0.12
DDX41-206ENST00000506965 PATE3B3GLJ2 98 aa14.33□□□□□ -0.12
DDX41-206ENST00000506965 HUS1O60921 280 aa14.33□□□□□ -0.12
DDX41-206ENST00000506965 TOP3BO95985 862 aaKnown RBP14.33□□□□□ -0.12
DDX41-206ENST00000506965 KRT19P08727 400 aa14.33□□□□□ -0.12
DDX41-206ENST00000506965 TCF3P15923 654 aa14.33□□□□□ -0.12
DDX41-206ENST00000506965 GAP43P17677 238 aa14.33□□□□□ -0.12
DDX41-206ENST00000506965 BDNFP23560 247 aa14.33□□□□□ -0.12
DDX41-206ENST00000506965 PNPLA4P41247 253 aa14.33□□□□□ -0.12
DDX41-206ENST00000506965 E2F4Q16254 413 aa14.33□□□□□ -0.12
DDX41-206ENST00000506965 RRAGBQ5VZM2 374 aa14.33□□□□□ -0.12
DDX41-206ENST00000506965 TMEM86AQ8N2M4 240 aa14.33□□□□□ -0.12
DDX41-206ENST00000506965 CAMKK1Q8N5S9 505 aa14.33□□□□□ -0.12
DDX41-206ENST00000506965 FRMD1Q8N878 549 aa14.33□□□□□ -0.12
DDX41-206ENST00000506965 USP33Q8TEY7 942 aa14.33□□□□□ -0.12
DDX41-206ENST00000506965 ELMO3Q96BJ8 720 aa14.33□□□□□ -0.12
DDX41-206ENST00000506965 SYT15Q9BQS2 421 aa14.33□□□□□ -0.12
DDX41-206ENST00000506965 MRPL45Q9BRJ2 306 aaKnown RBP14.33□□□□□ -0.12
DDX41-206ENST00000506965 LSM14BQ9BX40 385 aaKnown RBP14.33□□□□□ -0.12
DDX41-206ENST00000506965 TPSD1Q9BZJ3 242 aa14.33□□□□□ -0.12
DDX41-206ENST00000506965 TMEM206Q9H813 350 aa14.33□□□□□ -0.12
DDX41-206ENST00000506965 ZDHHC4Q9NPG8 344 aa14.33□□□□□ -0.12
DDX41-206ENST00000506965 EBF1Q9UH73 591 aa14.33□□□□□ -0.12
DDX41-206ENST00000506965 TRAV19A0A0A6YYK7 116 aa14.32□□□□□ -0.12
DDX41-206ENST00000506965 LNP1A1A4G5 178 aa14.32□□□□□ -0.12
DDX41-206ENST00000506965 BCLAF3A2AJT9 711 aaKnown RBP14.32□□□□□ -0.12
DDX41-206ENST00000506965 TGFB1I1O43294 461 aa14.32□□□□□ -0.12
DDX41-206ENST00000506965 AKAP3O75969 853 aa14.32□□□□□ -0.12
DDX41-206ENST00000506965 KCNK5O95279 499 aa14.32□□□□□ -0.12
DDX41-206ENST00000506965 OLFM2O95897 454 aa14.32□□□□□ -0.12
DDX41-206ENST00000506965 CST3P01034 146 aaPredicted RBP14.32□□□□□ -0.12
DDX41-206ENST00000506965 CYP17A1P05093 508 aa14.32□□□□□ -0.12
DDX41-206ENST00000506965 CKMP06732 381 aa14.32□□□□□ -0.12
DDX41-206ENST00000506965 USP17L7P0C7H9 530 aa14.32□□□□□ -0.12
DDX41-206ENST00000506965 IDEP14735 1019 aa14.32□□□□□ -0.12
DDX41-206ENST00000506965 ABCD1P33897 745 aa14.32□□□□□ -0.12
DDX41-206ENST00000506965 MAGEA11P43364 429 aa14.32□□□□□ -0.12
DDX41-206ENST00000506965 SLC6A11P48066 632 aa14.32□□□□□ -0.12
DDX41-206ENST00000506965 RPL10AP62906 217 aaKnown RBP14.32□□□□□ -0.12
DDX41-206ENST00000506965 MYL7Q01449 175 aa14.32□□□□□ -0.12
DDX41-206ENST00000506965 TMEM92Q6UXU6 159 aa14.32□□□□□ -0.12
DDX41-206ENST00000506965 SV2BQ7L1I2 683 aa14.32□□□□□ -0.12
DDX41-206ENST00000506965 RASSF3Q86WH2 238 aa14.32□□□□□ -0.12
DDX41-206ENST00000506965 GPD1LQ8N335 351 aa14.32□□□□□ -0.12
DDX41-206ENST00000506965 CPA6Q8N4T0 437 aa14.32□□□□□ -0.12
DDX41-206ENST00000506965 ZNF516Q92618 1163 aa14.32□□□□□ -0.12
DDX41-206ENST00000506965 WBP2Q969T9 261 aa14.32□□□□□ -0.12
DDX41-206ENST00000506965 PCED1BQ96HM7 432 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms