RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 GBP2P32456 591 aaPredicted RBP19.32■□□□□ 0.68
NPHP4-210ENST00000506941 RPL10AP62906 217 aaKnown RBP19.32■□□□□ 0.68
NPHP4-210ENST00000506941 VEPH1Q14D04 833 aa19.32■□□□□ 0.68
NPHP4-210ENST00000506941 PDZD4Q76G19 769 aaPredicted RBP19.32■□□□□ 0.68
NPHP4-210ENST00000506941 ITIH5Q86UX2 942 aa19.32■□□□□ 0.68
NPHP4-210ENST00000506941 NPAS3Q8IXF0 933 aa19.32■□□□□ 0.68
NPHP4-210ENST00000506941 TTC39CQ8N584 583 aa19.32■□□□□ 0.68
NPHP4-210ENST00000506941 SLC2A14Q8TDB8 520 aa19.32■□□□□ 0.68
NPHP4-210ENST00000506941 FGF13Q92913 245 aa19.32■□□□□ 0.68
NPHP4-210ENST00000506941 NAT10Q9H0A0 1025 aaKnown RBP19.32■□□□□ 0.68
NPHP4-210ENST00000506941 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.32■□□□□ 0.68
NPHP4-210ENST00000506941 MRPS23Q9Y3D9 190 aaKnown RBP19.32■□□□□ 0.68
NPHP4-210ENST00000506941 F8VP50 259 aa19.31■□□□□ 0.68
NPHP4-210ENST00000506941 GJA1P17302 382 aa19.31■□□□□ 0.68
NPHP4-210ENST00000506941 PON1P27169 355 aa19.31■□□□□ 0.68
NPHP4-210ENST00000506941 GRIK1P39086 918 aa19.31■□□□□ 0.68
NPHP4-210ENST00000506941 GCNT1Q02742 428 aa19.31■□□□□ 0.68
NPHP4-210ENST00000506941 EXOC3L4Q17RC7 722 aa19.31■□□□□ 0.68
NPHP4-210ENST00000506941 DPY19L2P1Q6NXN4 242 aa19.31■□□□□ 0.68
NPHP4-210ENST00000506941 GJB7Q6PEY0 223 aa19.31■□□□□ 0.68
NPHP4-210ENST00000506941 GAREM2Q75VX8 874 aa19.31■□□□□ 0.68
NPHP4-210ENST00000506941 RNF135Q8IUD6 432 aa19.31■□□□□ 0.68
NPHP4-210ENST00000506941 ZDHHC14Q8IZN3 488 aa19.31■□□□□ 0.68
NPHP4-210ENST00000506941 SHKBP1Q8TBC3 707 aa19.31■□□□□ 0.68
NPHP4-210ENST00000506941 KHSRPQ92945 711 aaKnown RBP eCLIP19.31■□□□□ 0.68
NPHP4-210ENST00000506941 ACSF2Q96CM8 615 aaPredicted RBP19.31■□□□□ 0.68
NPHP4-210ENST00000506941 MED10Q9BTT4 135 aa19.31■□□□□ 0.68
NPHP4-210ENST00000506941 IL21Q9HBE4 155 aa19.31■□□□□ 0.68
NPHP4-210ENST00000506941 SIX2Q9NPC8 291 aa19.31■□□□□ 0.68
NPHP4-210ENST00000506941 KRT82Q9NSB4 513 aa19.31■□□□□ 0.68
NPHP4-210ENST00000506941 EPS15L1Q9UBC2 864 aa19.31■□□□□ 0.68
NPHP4-210ENST00000506941 CDH7Q9ULB5 785 aa19.31■□□□□ 0.68
NPHP4-210ENST00000506941 KIF26AQ9ULI4 1882 aaPredicted RBP19.31■□□□□ 0.68
NPHP4-210ENST00000506941 ATP8B3O60423 1300 aa19.3■□□□□ 0.68
NPHP4-210ENST00000506941 SLC38A8A6NNN8 435 aa19.3■□□□□ 0.68
NPHP4-210ENST00000506941 NOL4O94818 638 aa19.3■□□□□ 0.68
NPHP4-210ENST00000506941 LAMP2P13473 410 aa19.3■□□□□ 0.68
NPHP4-210ENST00000506941 ATP1A3P13637 1013 aa19.3■□□□□ 0.68
NPHP4-210ENST00000506941 ADORA2BP29275 332 aa19.3■□□□□ 0.68
NPHP4-210ENST00000506941 ZNF165P49910 485 aa19.3■□□□□ 0.68
NPHP4-210ENST00000506941 YWHAEP62258 255 aaKnown RBP19.3■□□□□ 0.68
NPHP4-210ENST00000506941 IQCB1Q15051 598 aa19.3■□□□□ 0.68
NPHP4-210ENST00000506941 CYP4A22Q5TCH4 519 aa19.3■□□□□ 0.68
NPHP4-210ENST00000506941 LEMD2Q8NC56 503 aa19.3■□□□□ 0.68
NPHP4-210ENST00000506941 SMARCD1Q96GM5 515 aa19.3■□□□□ 0.68
NPHP4-210ENST00000506941 TMEM176AQ96HP8 235 aa19.3■□□□□ 0.68
NPHP4-210ENST00000506941 SPATA17Q96L03 361 aa19.3■□□□□ 0.68
NPHP4-210ENST00000506941 C8orf48Q96LL4 319 aa19.3■□□□□ 0.68
NPHP4-210ENST00000506941 KCNK16Q96T55 309 aa19.3■□□□□ 0.68
NPHP4-210ENST00000506941 HNRNPABQ99729 332 aaKnown RBP19.3■□□□□ 0.68
NPHP4-210ENST00000506941 VPS16Q9H269 839 aa19.3■□□□□ 0.68
NPHP4-210ENST00000506941 LIMD1Q9UGP4 676 aa19.3■□□□□ 0.68
NPHP4-210ENST00000506941 AJAP1Q9UKB5 411 aaPredicted RBP19.3■□□□□ 0.68
NPHP4-210ENST00000506941 A0A1W2PRU2 124 aa19.29■□□□□ 0.68
NPHP4-210ENST00000506941 PES1O00541 588 aaKnown RBP19.29■□□□□ 0.68
NPHP4-210ENST00000506941 ZNF197O14709 1029 aa19.29■□□□□ 0.68
NPHP4-210ENST00000506941 TRIM66O15016 1216 aa19.29■□□□□ 0.68
NPHP4-210ENST00000506941 AP1G2O75843 785 aa19.29■□□□□ 0.68
NPHP4-210ENST00000506941 BEST1O76090 585 aa19.29■□□□□ 0.68
NPHP4-210ENST00000506941 CSH1P0DML2 217 aa19.29■□□□□ 0.68
NPHP4-210ENST00000506941 CSH2P0DML3 217 aa19.29■□□□□ 0.68
NPHP4-210ENST00000506941 USP46P62068 366 aa19.29■□□□□ 0.68
NPHP4-210ENST00000506941 KCNMA1Q12791 1236 aa19.29■□□□□ 0.68
NPHP4-210ENST00000506941 TEAD2Q15562 447 aa19.29■□□□□ 0.68
NPHP4-210ENST00000506941 PPP1R26Q5T8A7 1209 aaPredicted RBP19.29■□□□□ 0.68
NPHP4-210ENST00000506941 TMEM270Q6UE05 265 aa19.29■□□□□ 0.68
NPHP4-210ENST00000506941 APTXQ7Z2E3 356 aaKnown RBP19.29■□□□□ 0.68
NPHP4-210ENST00000506941 TMEM150AQ86TG1 271 aa19.29■□□□□ 0.68
NPHP4-210ENST00000506941 PLCD3Q8N3E9 789 aa19.29■□□□□ 0.68
NPHP4-210ENST00000506941 ZMIZ2Q8NF64 920 aa19.29■□□□□ 0.68
NPHP4-210ENST00000506941 ST13P5Q8NFI4 369 aaPredicted RBP19.29■□□□□ 0.68
NPHP4-210ENST00000506941 CYFIP2Q96F07 1278 aa19.29■□□□□ 0.68
NPHP4-210ENST00000506941 HEXIM2Q96MH2 286 aaKnown RBP19.29■□□□□ 0.68
NPHP4-210ENST00000506941 SMOQ99835 787 aa19.29■□□□□ 0.68
NPHP4-210ENST00000506941 UBE2TQ9NPD8 197 aaPredicted RBP19.29■□□□□ 0.68
NPHP4-210ENST00000506941 APEX2Q9UBZ4 518 aa19.29■□□□□ 0.68
NPHP4-210ENST00000506941 LIMA1Q9UHB6 759 aaKnown RBP19.29■□□□□ 0.68
NPHP4-210ENST00000506941 MAGED2Q9UNF1 606 aaPredicted RBP19.29■□□□□ 0.68
NPHP4-210ENST00000506941 RNF225M0QZC1 329 aaPredicted RBP19.28■□□□□ 0.68
NPHP4-210ENST00000506941 TADA3O75528 432 aa19.28■□□□□ 0.68
NPHP4-210ENST00000506941 MICAL2O94851 1124 aa19.28■□□□□ 0.68
NPHP4-210ENST00000506941 ASGR2P07307 311 aa19.28■□□□□ 0.68
NPHP4-210ENST00000506941 ANXA13P27216 316 aa19.28■□□□□ 0.68
NPHP4-210ENST00000506941 GABRR2P28476 465 aa19.28■□□□□ 0.68
NPHP4-210ENST00000506941 COPB1P53618 953 aaKnown RBP19.28■□□□□ 0.68
NPHP4-210ENST00000506941 TAF12Q16514 161 aa19.28■□□□□ 0.68
NPHP4-210ENST00000506941 STXBP5Q5T5C0 1151 aa19.28■□□□□ 0.68
NPHP4-210ENST00000506941 MCRS1Q96EZ8 462 aa19.28■□□□□ 0.68
NPHP4-210ENST00000506941 TRMT2BQ96GJ1 504 aaKnown RBP19.28■□□□□ 0.68
NPHP4-210ENST00000506941 MYRFLQ96LU7 910 aa19.28■□□□□ 0.68
NPHP4-210ENST00000506941 ZSWIM3Q96MP5 696 aa19.28■□□□□ 0.68
NPHP4-210ENST00000506941 CBX8Q9HC52 389 aa19.28■□□□□ 0.68
NPHP4-210ENST00000506941 DMAP1Q9NPF5 467 aaPredicted RBP19.28■□□□□ 0.68
NPHP4-210ENST00000506941 PCDHB4Q9Y5E5 795 aa19.28■□□□□ 0.68
NPHP4-210ENST00000506941 TNFRSF10AO00220 468 aa19.27■□□□□ 0.68
NPHP4-210ENST00000506941 CALCAP01258 141 aa19.27■□□□□ 0.68
NPHP4-210ENST00000506941 F11P03951 625 aa19.27■□□□□ 0.68
NPHP4-210ENST00000506941 TRIM21P19474 475 aaKnown RBP19.27■□□□□ 0.68
NPHP4-210ENST00000506941 ZNF132P52740 706 aa19.27■□□□□ 0.68
NPHP4-210ENST00000506941 CYP4F8P98187 520 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms