RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 DNAJC25Q9H1X3 360 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 CRTAC1Q9NQ79 661 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 CDH7Q9ULB5 785 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 NME7Q9Y5B8 376 aa13.99□□□□□ -0.17
TCOF1-209ENST00000506630 HELZP42694 1942 aaKnown RBP13.99□□□□□ -0.17
TCOF1-209ENST00000506630 ZNF197O14709 1029 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 ABCB7O75027 752 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 LRRN2O75325 713 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 MBD3O95983 291 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 FAM163BP0C2L3 166 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 CEBPBP17676 345 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 ATF6P18850 670 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 CYP2F1P24903 491 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 GPR15P49685 360 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 CYP27A1Q02318 531 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 PRKCQQ04759 706 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 MAPRE1Q15691 268 aaKnown RBP13.98□□□□□ -0.17
TCOF1-209ENST00000506630 TAF12Q16514 161 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 CBWD6Q4V339 395 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 MDH1BQ5I0G3 518 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 CBWD3Q5JTY5 395 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 CBWD5Q5RIA9 395 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 FAM171BQ6P995 826 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 FOXR2Q6PJQ5 311 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 MTSS1LQ765P7 747 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 ITIH5Q86UX2 942 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 MAML2Q8IZL2 1156 aaPredicted RBP13.98□□□□□ -0.17
TCOF1-209ENST00000506630 FBXL13Q8NEE6 735 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 GIPC2Q8TF65 315 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 FGF13Q92913 245 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 TCEAL4Q96EI5 215 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 SRRTQ9BXP5 876 aaKnown RBP13.98□□□□□ -0.17
TCOF1-209ENST00000506630 OSBPL6Q9BZF3 934 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 NIF3L1Q9GZT8 377 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 SDCBP2Q9H190 292 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 DPEP3Q9H4B8 488 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 AVENQ9NQS1 362 aaPredicted RBP13.98□□□□□ -0.17
TCOF1-209ENST00000506630 RWDD2AQ9UIY3 292 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 PCDHGA2Q9Y5H1 932 aa13.98□□□□□ -0.17
TCOF1-209ENST00000506630 FAM170BA6NMN3 283 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 FGFR1OPO95684 399 aaKnown RBP13.97□□□□□ -0.17
TCOF1-209ENST00000506630 GJA1P17302 382 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 CCR2P41597 374 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 MAGEA9P43362 315 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 ASPAP45381 313 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 MCCD1P59942 119 aaPredicted RBP13.97□□□□□ -0.17
TCOF1-209ENST00000506630 PFKPQ01813 784 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 CSTF1Q05048 431 aaKnown RBP13.97□□□□□ -0.17
TCOF1-209ENST00000506630 UBXN2BQ14CS0 331 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 MLF2Q15773 248 aaPredicted RBP13.97□□□□□ -0.17
TCOF1-209ENST00000506630 SLC44A4Q53GD3 710 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 PRSS36Q5K4E3 855 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 PARM1Q6UWI2 310 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 DNAJB7Q7Z6W7 309 aaPredicted RBP13.97□□□□□ -0.17
TCOF1-209ENST00000506630 TMC8Q8IU68 726 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 SCN4BQ8IWT1 228 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 NPAS3Q8IXF0 933 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 MLKLQ8NB16 471 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 LEMD2Q8NC56 503 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 SEMA4DQ92854 862 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 FGF14Q92915 247 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 PSMG2Q969U7 264 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 SLC35C1Q96A29 364 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 FUBP3Q96I24 572 aaKnown RBP eCLIP13.97□□□□□ -0.17
TCOF1-209ENST00000506630 APOBEC3GQ9HC16 384 aaKnown RBP13.97□□□□□ -0.17
TCOF1-209ENST00000506630 ABCB6Q9NP58 842 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 RAB20Q9NX57 234 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 MAGEC2Q9UBF1 373 aaPredicted RBP13.97□□□□□ -0.17
TCOF1-209ENST00000506630 DACH1Q9UI36 760 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 ASB3Q9Y575 518 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 OTOGLQ3ZCN5 2332 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 NCOR2Q9Y618 2525 aa13.97□□□□□ -0.17
TCOF1-209ENST00000506630 KIF26AQ9ULI4 1882 aaPredicted RBP13.96□□□□□ -0.17
TCOF1-209ENST00000506630 PRR5-ARHGAP8B1AHC4 643 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 NCAM2O15394 837 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 GNA14O95837 355 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 CCDC192P0DO97 292 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 PTPN1P18031 435 aaKnown RBP13.96□□□□□ -0.17
TCOF1-209ENST00000506630 BDNFP23560 247 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 EPHA5P54756 1037 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 NLRP12P59046 1061 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 RPL10AP62906 217 aaKnown RBP13.96□□□□□ -0.17
TCOF1-209ENST00000506630 ARHGAP8P85298 464 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 LMNB2Q03252 620 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 DDR2Q16832 855 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 TPD52L1Q16890 204 aaPredicted RBP13.96□□□□□ -0.17
TCOF1-209ENST00000506630 DPCR1Q3MIW9 517 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 CFAP221Q4G0U5 840 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 WDR44Q5JSH3 913 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 SDHAF4Q5VUM1 108 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 CREBRFQ8IUR6 639 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 B3GALNT2Q8NCR0 500 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 STKLD1Q8NE28 680 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 MYCBPAPQ8TBZ2 947 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 MCRS1Q96EZ8 462 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 PCED1BQ96HM7 432 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 GCNAQ96QF7 691 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 NELL2Q99435 816 aa13.96□□□□□ -0.17
TCOF1-209ENST00000506630 DDX23Q9BUQ8 820 aaKnown RBP13.96□□□□□ -0.17
TCOF1-209ENST00000506630 ZNF334Q9HCZ1 680 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms