RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 MRPL45Q9BRJ2 306 aaKnown RBP7.75□□□□□ -1.17
GYPB-206ENST00000506516 PI4K2AQ9BTU6 479 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 THAP9Q9H5L6 903 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 CYP3A43Q9HB55 503 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 ABCB6Q9NP58 842 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 AVENQ9NQS1 362 aaPredicted RBP7.75□□□□□ -1.17
GYPB-206ENST00000506516 ASAH2Q9NR71 780 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 ANO10Q9NW15 660 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 DNMT3BQ9UBC3 853 aaKnown RBP7.75□□□□□ -1.17
GYPB-206ENST00000506516 CDH22Q9UJ99 828 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 COQ4Q9Y3A0 265 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 MRPS23Q9Y3D9 190 aaKnown RBP7.75□□□□□ -1.17
GYPB-206ENST00000506516 CLUHO75153 1309 aa7.75□□□□□ -1.17
GYPB-206ENST00000506516 MYBPHLA2RUH7 354 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 PMM2O15305 246 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 ATP2C2O75185 946 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 MICAL2O94851 1124 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 AFPP02771 609 aaKnown RBP7.74□□□□□ -1.17
GYPB-206ENST00000506516 RHOP08100 348 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 HAPLN1P10915 354 aaPredicted RBP7.74□□□□□ -1.17
GYPB-206ENST00000506516 SP100P23497 879 aaPredicted RBP7.74□□□□□ -1.17
GYPB-206ENST00000506516 CYP2F1P24903 491 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 GRIK1P39086 918 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 MTIF2P46199 727 aaKnown RBP7.74□□□□□ -1.17
GYPB-206ENST00000506516 RAP1GAPP47736 663 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 FMO5P49326 533 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 PSMC1P62191 440 aaKnown RBP7.74□□□□□ -1.17
GYPB-206ENST00000506516 NOP14P78316 857 aaKnown RBP7.74□□□□□ -1.17
GYPB-206ENST00000506516 NTHL1P78549 312 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 NR1H3Q13133 447 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 SPOPLQ6IQ16 392 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 VSTM1Q6UX27 236 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 SCARA5Q6ZMJ2 495 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 GET4Q7L5D6 327 aaPredicted RBP7.74□□□□□ -1.17
GYPB-206ENST00000506516 DNAJB7Q7Z6W7 309 aaPredicted RBP7.74□□□□□ -1.17
GYPB-206ENST00000506516 RNF135Q8IUD6 432 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 TRIM59Q8IWR1 403 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 B3GALNT2Q8NCR0 500 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 MYCBPAPQ8TBZ2 947 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 ENOX1Q8TC92 643 aaKnown RBP7.74□□□□□ -1.17
GYPB-206ENST00000506516 SEMA4DQ92854 862 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 NXPE3Q969Y0 559 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 CALR3Q96L12 384 aaKnown RBP7.74□□□□□ -1.17
GYPB-206ENST00000506516 CEP295NLQ96MC4 621 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 GPR88Q9GZN0 384 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 NIF3L1Q9GZT8 377 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 NAT10Q9H0A0 1025 aaKnown RBP7.74□□□□□ -1.17
GYPB-206ENST00000506516 FAM124BQ9H5Z6 455 aaPredicted RBP7.74□□□□□ -1.17
GYPB-206ENST00000506516 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.74□□□□□ -1.172e-23■■■■■ 397.5
GYPB-206ENST00000506516 TMLHEQ9NVH6 421 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 HCFC1R1Q9NWW0 138 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 EHD2Q9NZN4 543 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 CDH7Q9ULB5 785 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 YIPF1Q9Y548 306 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 PDCD11Q14690 1871 aaKnown RBP7.74□□□□□ -1.17
GYPB-206ENST00000506516 ATP8B3O60423 1300 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 ATG2AQ2TAZ0 1938 aa7.74□□□□□ -1.17
GYPB-206ENST00000506516 ANK1P16157 1881 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 MYO7AQ13402 2215 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 C2CD4DB7Z1M9 353 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 HCRTO43612 131 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 SOAT2O75908 522 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 VNN2O95498 520 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 FBXO45P0C2W1 286 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 CSH1P0DML2 217 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 CSH2P0DML3 217 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 MYL4P12829 197 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 LAMP2P13473 410 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 BDNFP23560 247 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 TBXAS1P24557 533 aaPredicted RBP7.73□□□□□ -1.17
GYPB-206ENST00000506516 ANXA13P27216 316 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 MAGEA11P43364 429 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 ASPAP45381 313 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 CDR1P51861 262 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 NDST1P52848 882 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 YWHAEP62258 255 aaKnown RBP7.73□□□□□ -1.17
GYPB-206ENST00000506516 STX1AQ16623 288 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 SKOR2Q2VWA4 1001 aaPredicted RBP7.73□□□□□ -1.17
GYPB-206ENST00000506516 MDH1BQ5I0G3 518 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 MTSS1LQ765P7 747 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 SCN4BQ8IWT1 228 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 CRYBG2Q8N1P7 616 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 EHBP1Q8NDI1 1231 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 FEZF2Q8TBJ5 459 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 GIPC2Q8TF65 315 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 FGF13Q92913 245 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 PSMG2Q969U7 264 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 MYLPFQ96A32 169 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 ELMO3Q96BJ8 720 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 CCDC97Q96F63 343 aaPredicted RBP7.73□□□□□ -1.17
GYPB-206ENST00000506516 PCED1BQ96HM7 432 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 CNOT6LQ96LI5 555 aaKnown RBP7.73□□□□□ -1.17
GYPB-206ENST00000506516 GCNAQ96QF7 691 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 PKMYT1Q99640 499 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 MED10Q9BTT4 135 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 NT5C1AQ9BXI3 368 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 BCO2Q9BYV7 579 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 CRISPLD1Q9H336 500 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 SMYD3Q9H7B4 428 aa7.73□□□□□ -1.17
GYPB-206ENST00000506516 APOBEC3GQ9HC16 384 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms