RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 PSTPIP1O43586 416 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 RNF8O76064 485 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 BAIAP3O94812 1187 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 ERBB2P04626 1255 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 NPR3P17342 541 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 CXCR5P32302 372 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 CTNNA1P35221 906 aaKnown RBP12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 BRCC3P46736 316 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 PLA2G4AP47712 749 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 HADHQ16836 314 aaKnown RBP12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 PAN2Q504Q3 1202 aaKnown RBP12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 C2CD6Q53TS8 623 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 INTS6LQ5JSJ4 861 aaKnown RBP12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 PHLDB2Q86SQ0 1253 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 TTC30AQ86WT1 665 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 CREG2Q8IUH2 290 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 NIPA2Q8N8Q9 360 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 COG1Q8WTW3 980 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 MAIP1Q8WWC4 291 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 SMARCD1Q96GM5 515 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 PSMB7Q99436 277 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 UBXN6Q9BZV1 441 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 GOLPH3Q9H4A6 298 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 NRDE2Q9H7Z3 1164 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 LRRC4Q9HBW1 653 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 ASNSD1Q9NWL6 643 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 CACNG4Q9UBN1 327 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 CHORDC1Q9UHD1 332 aaPredicted RBP12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 CYTH4Q9UIA0 394 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 ADAM28Q9UKQ2 775 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 TTC7AQ9ULT0 858 aaPredicted RBP12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 PRG3Q9Y2Y8 225 aaPredicted RBP12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 PCDHA3Q9Y5H8 950 aa12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 TIMM13Q9Y5L4 95 aaPredicted RBP12.67□□□□□ -0.38
POLR2J3-211ENST00000506060 CENPFP49454 3210 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 GOLGA6L10A0A0M3HER8 536 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 TCRBV5S1A1TA0A578 114 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 OR6C75A6NL08 312 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 E5RJQ4 531 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 H7C4K7 107 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 NRP1O14786 923 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 DDX3YO15523 660 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 AP1G2O75843 785 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 FBXO21O94952 628 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 ACAT1P24752 427 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 PSMA2P25787 234 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 SSR1P43307 286 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 ALDH7A1P49419 539 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 SLC6A3Q01959 620 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 PPIGQ13427 754 aaKnown RBP eCLIP12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 NFE2Q16621 373 aaPredicted RBP12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 EFHC1Q5JVL4 640 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 PPP1R15BQ5SWA1 713 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 TEX35Q5T0J7 233 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 LRRC38Q5VT99 294 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 ARCQ7LC44 396 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 FAM35AQ86V20 835 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 FUKQ8N0W3 1084 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 RASGEF1CQ8N431 466 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 GPR161Q8N6U8 529 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 HASPINQ8TF76 798 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 KCTD13Q8WZ19 329 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 CD101Q93033 1021 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 BTBD6Q96KE9 485 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 MCOLN1Q9GZU1 580 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 METTL5Q9NRN9 209 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 DDX56Q9NY93 547 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 NME7Q9Y5B8 376 aa12.66□□□□□ -0.38
POLR2J3-211ENST00000506060 DNAH12Q6ZR08 3092 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 CCDC188H7C350 402 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 I3L4J1 428 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 ZNF185O15231 689 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 ATP2C2O75185 946 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 UPP2O95045 317 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 OAZ2O95190 189 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 KRT7P08729 469 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 GPD1P21695 349 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 MCM3P25205 808 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 RPL34P49207 117 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 RGS7P49802 495 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 RPL7AP62424 266 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 SMARCB1Q12824 385 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 PTPROQ16827 1216 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 ZNF280DQ6N043 979 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 PMF1Q6P1K2 205 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 FAM171BQ6P995 826 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 CD300LGQ6UXG3 332 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 RSRC2Q7L4I2 434 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 SPATA2LQ8IUW3 424 aaPredicted RBP12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 SIX6OS1Q8N1H7 587 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 CRIPAKQ8N1N5 446 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 RBM41Q96IZ5 413 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 RNPC3Q96LT9 517 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 CNPY3Q9BT09 278 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 TRIM62Q9BVG3 475 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 B3GNT5Q9BYG0 378 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 IL23AQ9NPF7 189 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 CRTAC1Q9NQ79 661 aa12.65□□□□□ -0.38
POLR2J3-211ENST00000506060 KRT82Q9NSB4 513 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms