RNA–Protein interactions for RNA: ENST00000505377.1

COL25A1-205, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 448 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-205ENST00000505377 ATP2A3Q93084 1043 aa12.93□□□□□ -0.34
COL25A1-205ENST00000505377 CNOT6LQ96LI5 555 aaKnown RBP12.93□□□□□ -0.34
COL25A1-205ENST00000505377 ZHX3Q9H4I2 956 aa12.93□□□□□ -0.34
COL25A1-205ENST00000505377 BLOC1S4Q9NUP1 217 aa12.93□□□□□ -0.34
COL25A1-205ENST00000505377 MBD1Q9UIS9 605 aaPredicted RBP12.93□□□□□ -0.34
COL25A1-205ENST00000505377 GTF3C4Q9UKN8 822 aa12.93□□□□□ -0.34
COL25A1-205ENST00000505377 CIZ1Q9ULV3 898 aaPredicted RBP12.93□□□□□ -0.34
COL25A1-205ENST00000505377 L1RE1Q9UN81 338 aa12.93□□□□□ -0.34
COL25A1-205ENST00000505377 ANAPC1Q9H1A4 1944 aa12.93□□□□□ -0.34
COL25A1-205ENST00000505377 ATXN2Q99700 1313 aaKnown RBP12.92□□□□□ -0.34
COL25A1-205ENST00000505377 ASXL3Q9C0F0 2248 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 TRAV19A0A0A6YYK7 116 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 TMEM8BA6NDV4 472 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 SOBPA7XYQ1 873 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 H0YCG3 227 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 LAD1O00515 517 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 FAM13AO94988 1023 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 USP17L7P0C7H9 530 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 PAX3P23760 479 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 ZNF131P52739 623 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 TSPY1Q01534 308 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 SMARCB1Q12824 385 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 MCM6Q14566 821 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 CRY1Q16526 586 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 ALLCQ8N6M5 410 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 OLIG1Q8TAK6 271 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 CDK5RAP3Q96JB5 506 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 MYRFLQ96LU7 910 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 ASB7Q9H672 318 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 KCND2Q9NZV8 630 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 AGO2Q9UKV8 859 aaKnown RBP12.92□□□□□ -0.34
COL25A1-205ENST00000505377 MMP17Q9ULZ9 603 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 C2CD2Q9Y426 696 aa12.92□□□□□ -0.34
COL25A1-205ENST00000505377 FREM2Q5SZK8 3169 aa12.91□□□□□ -0.34
COL25A1-205ENST00000505377 APC2O95996 2303 aa12.91□□□□□ -0.34
COL25A1-205ENST00000505377 IGSF10Q6WRI0 2623 aa12.91□□□□□ -0.34
COL25A1-205ENST00000505377 SGK1O00141 431 aa12.91□□□□□ -0.34
COL25A1-205ENST00000505377 TRAK2O60296 914 aa12.91□□□□□ -0.34
COL25A1-205ENST00000505377 ATP2C2O75185 946 aa12.91□□□□□ -0.34
COL25A1-205ENST00000505377 ENGP17813 658 aa12.91□□□□□ -0.34
COL25A1-205ENST00000505377 HDCP19113 662 aa12.91□□□□□ -0.34
COL25A1-205ENST00000505377 ADSSP30520 456 aa12.91□□□□□ -0.34
COL25A1-205ENST00000505377 POLR2BP30876 1174 aaKnown RBP12.91□□□□□ -0.34
COL25A1-205ENST00000505377 SIM1P81133 766 aaPredicted RBP12.91□□□□□ -0.34
COL25A1-205ENST00000505377 HMGN5P82970 282 aaKnown RBP12.91□□□□□ -0.34
COL25A1-205ENST00000505377 GTF2BQ00403 316 aa12.91□□□□□ -0.34
COL25A1-205ENST00000505377 INTS6LQ5JSJ4 861 aaKnown RBP12.91□□□□□ -0.34
COL25A1-205ENST00000505377 PIP4P1Q86T03 277 aa12.91□□□□□ -0.34
COL25A1-205ENST00000505377 SCN4BQ8IWT1 228 aa12.91□□□□□ -0.34
COL25A1-205ENST00000505377 DEFB119Q8N690 84 aa12.91□□□□□ -0.34
COL25A1-205ENST00000505377 OR2I1PQ8NGU4 316 aa12.91□□□□□ -0.34
COL25A1-205ENST00000505377 TRMT2BQ96GJ1 504 aaKnown RBP12.91□□□□□ -0.34
COL25A1-205ENST00000505377 TMEM206Q9H813 350 aa12.91□□□□□ -0.34
COL25A1-205ENST00000505377 PARVGQ9HBI0 331 aa12.91□□□□□ -0.34
COL25A1-205ENST00000505377 DDX43Q9NXZ2 648 aaKnown RBP12.91□□□□□ -0.34
COL25A1-205ENST00000505377 ODF2LQ9ULJ1 636 aa12.91□□□□□ -0.34
COL25A1-205ENST00000505377 AGAP1Q9UPQ3 857 aa12.91□□□□□ -0.34
COL25A1-205ENST00000505377 ADAMTS9Q9P2N4 1935 aa12.91□□□□□ -0.34
COL25A1-205ENST00000505377 ACACAQ13085 2346 aa12.9□□□□□ -0.34
COL25A1-205ENST00000505377 KLF8O95600 359 aaPredicted RBP12.9□□□□□ -0.34
COL25A1-205ENST00000505377 CYP17A1P05093 508 aa12.9□□□□□ -0.34
COL25A1-205ENST00000505377 ITPKAP23677 461 aa12.9□□□□□ -0.34
COL25A1-205ENST00000505377 P2RY2P41231 377 aa12.9□□□□□ -0.34
COL25A1-205ENST00000505377 USP46P62068 366 aa12.9□□□□□ -0.34
COL25A1-205ENST00000505377 RPL10AP62906 217 aaKnown RBP12.9□□□□□ -0.34
COL25A1-205ENST00000505377 GRIN1Q05586 938 aa12.9□□□□□ -0.34
COL25A1-205ENST00000505377 KCNA1Q09470 495 aa12.9□□□□□ -0.34
COL25A1-205ENST00000505377 NFE2Q16621 373 aaPredicted RBP12.9□□□□□ -0.34
COL25A1-205ENST00000505377 SV2CQ496J9 727 aa12.9□□□□□ -0.34
COL25A1-205ENST00000505377 MCTP1Q6DN14 999 aa12.9□□□□□ -0.34
COL25A1-205ENST00000505377 C12orf40Q86WS4 652 aa12.9□□□□□ -0.34
COL25A1-205ENST00000505377 CHCHD4Q8N4Q1 142 aa12.9□□□□□ -0.34
COL25A1-205ENST00000505377 C1orf127Q8N9H9 656 aa12.9□□□□□ -0.34
COL25A1-205ENST00000505377 IL17RCQ8NAC3 791 aa12.9□□□□□ -0.34
COL25A1-205ENST00000505377 TXNDC5Q8NBS9 432 aaKnown RBP12.9□□□□□ -0.34
COL25A1-205ENST00000505377 CXorf38Q8TB03 319 aa12.9□□□□□ -0.34
COL25A1-205ENST00000505377 ACBD6Q9BR61 282 aa12.9□□□□□ -0.34
COL25A1-205ENST00000505377 EVLQ9UI08 416 aaPredicted RBP12.9□□□□□ -0.34
COL25A1-205ENST00000505377 ARHGAP26Q9UNA1 814 aa12.9□□□□□ -0.34
COL25A1-205ENST00000505377 MSRB2Q9Y3D2 182 aa12.9□□□□□ -0.34
COL25A1-205ENST00000505377 NEUROG3Q9Y4Z2 214 aa12.9□□□□□ -0.34
COL25A1-205ENST00000505377 STYXL1Q9Y6J8 313 aa12.9□□□□□ -0.34
COL25A1-205ENST00000505377 SETXQ7Z333 2677 aaKnown RBP12.9□□□□□ -0.34
COL25A1-205ENST00000505377 GCN1Q92616 2671 aaKnown RBP12.9□□□□□ -0.34
COL25A1-205ENST00000505377 LEFTY2O00292 366 aa12.89□□□□□ -0.35
COL25A1-205ENST00000505377 MAP3K13O43283 966 aa12.89□□□□□ -0.35
COL25A1-205ENST00000505377 ADAM23O75077 832 aa12.89□□□□□ -0.35
COL25A1-205ENST00000505377 CAPNS1P04632 268 aa12.89□□□□□ -0.35
COL25A1-205ENST00000505377 ITGB3P05106 788 aa12.89□□□□□ -0.35
COL25A1-205ENST00000505377 KRT18P05783 430 aaKnown RBP12.89□□□□□ -0.35
COL25A1-205ENST00000505377 PLCG1P19174 1290 aa12.89□□□□□ -0.35
COL25A1-205ENST00000505377 TIE1P35590 1138 aa12.89□□□□□ -0.35
COL25A1-205ENST00000505377 TFAMQ00059 246 aaKnown RBP12.89□□□□□ -0.35
COL25A1-205ENST00000505377 NR1H3Q13133 447 aa12.89□□□□□ -0.35
COL25A1-205ENST00000505377 SEMA3BQ13214 749 aa12.89□□□□□ -0.35
COL25A1-205ENST00000505377 MAP7D1Q3KQU3 841 aa12.89□□□□□ -0.35
COL25A1-205ENST00000505377 C19orf48Q6RUI8 117 aa12.89□□□□□ -0.35
COL25A1-205ENST00000505377 LPCAT2Q7L5N7 544 aa12.89□□□□□ -0.35
COL25A1-205ENST00000505377 FILIP1Q7Z7B0 1213 aa12.89□□□□□ -0.35
COL25A1-205ENST00000505377 C11orf74Q86VG3 221 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms