RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 NFE2Q16621 373 aaPredicted RBP17.96■□□□□ 0.47
SYNE4-207ENST00000505054 MAN2A1Q16706 1144 aa17.96■□□□□ 0.47
SYNE4-207ENST00000505054 ZSCAN23Q3MJ62 389 aa17.96■□□□□ 0.47
SYNE4-207ENST00000505054 WDR44Q5JSH3 913 aa17.96■□□□□ 0.47
SYNE4-207ENST00000505054 MTSS1LQ765P7 747 aa17.96■□□□□ 0.47
SYNE4-207ENST00000505054 SPPL2BQ8TCT7 592 aa17.96■□□□□ 0.47
SYNE4-207ENST00000505054 C2orf15Q8WU43 125 aaKnown RBP17.96■□□□□ 0.47
SYNE4-207ENST00000505054 RMDN1Q96DB5 314 aa17.96■□□□□ 0.47
SYNE4-207ENST00000505054 FAXDC2Q96IV6 333 aa17.96■□□□□ 0.47
SYNE4-207ENST00000505054 LPIN3Q9BQK8 851 aa17.96■□□□□ 0.47
SYNE4-207ENST00000505054 FOXQ1Q9C009 403 aa17.96■□□□□ 0.47
SYNE4-207ENST00000505054 CYP3A43Q9HB55 503 aa17.96■□□□□ 0.47
SYNE4-207ENST00000505054 FANCLQ9NW38 375 aa17.96■□□□□ 0.47
SYNE4-207ENST00000505054 ABI2Q9NYB9 513 aaPredicted RBP17.96■□□□□ 0.47
SYNE4-207ENST00000505054 SLC27A5Q9Y2P5 690 aa17.96■□□□□ 0.47
SYNE4-207ENST00000505054 FRYLO94915 3013 aa17.96■□□□□ 0.46
SYNE4-207ENST00000505054 XYLBO75191 536 aa17.95■□□□□ 0.46
SYNE4-207ENST00000505054 SOAT2O75908 522 aa17.95■□□□□ 0.46
SYNE4-207ENST00000505054 EEF1GP26641 437 aaKnown RBP17.95■□□□□ 0.46
SYNE4-207ENST00000505054 NDST1P52848 882 aa17.95■□□□□ 0.46
SYNE4-207ENST00000505054 TWF1Q12792 350 aa17.95■□□□□ 0.46
SYNE4-207ENST00000505054 LRMPQ12912 555 aa17.95■□□□□ 0.46
SYNE4-207ENST00000505054 ORC1Q13415 861 aa17.95■□□□□ 0.46
SYNE4-207ENST00000505054 TCP11X2Q5H9J9 407 aa17.95■□□□□ 0.46
SYNE4-207ENST00000505054 MIIPQ5JXC2 388 aa17.95■□□□□ 0.46
SYNE4-207ENST00000505054 PARM1Q6UWI2 310 aa17.95■□□□□ 0.46
SYNE4-207ENST00000505054 KIAA2013Q8IYS2 634 aa17.95■□□□□ 0.46
SYNE4-207ENST00000505054 AOPEPQ8N6M6 819 aa17.95■□□□□ 0.46
SYNE4-207ENST00000505054 MYLPFQ96A32 169 aa17.95■□□□□ 0.46
SYNE4-207ENST00000505054 TWNKQ96RR1 684 aa17.95■□□□□ 0.46
SYNE4-207ENST00000505054 HINFPQ9BQA5 517 aa17.95■□□□□ 0.46
SYNE4-207ENST00000505054 BPIFA3Q9BQP9 254 aa17.95■□□□□ 0.46
SYNE4-207ENST00000505054 TUBGCP2Q9BSJ2 902 aa17.95■□□□□ 0.46
SYNE4-207ENST00000505054 INTS2Q9H0H0 1204 aaKnown RBP17.95■□□□□ 0.46
SYNE4-207ENST00000505054 HSD3B7Q9H2F3 369 aa17.95■□□□□ 0.46
SYNE4-207ENST00000505054 HSFX1Q9UBD0 423 aa17.95■□□□□ 0.46
SYNE4-207ENST00000505054 PCDHB5Q9Y5E4 795 aa17.95■□□□□ 0.46
SYNE4-207ENST00000505054 CILPO75339 1184 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 LRG1P02750 347 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 HAPLN1P10915 354 aaPredicted RBP17.94■□□□□ 0.46
SYNE4-207ENST00000505054 GLULP15104 373 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 PTPN1P18031 435 aaKnown RBP17.94■□□□□ 0.46
SYNE4-207ENST00000505054 CD58P19256 250 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 GPC5P78333 572 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 NTHL1P78549 312 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 PRKCQQ04759 706 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 CETN1Q12798 172 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 CUL2Q13617 745 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 MDH1BQ5I0G3 518 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 UNC93AQ86WB7 457 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 B3GALNT2Q8NCR0 500 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 EHBP1Q8NDI1 1231 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 ST13P5Q8NFI4 369 aaPredicted RBP17.94■□□□□ 0.46
SYNE4-207ENST00000505054 MYCBPAPQ8TBZ2 947 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 WHAMMQ8TF30 809 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 RUBCNQ92622 972 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 PCED1BQ96HM7 432 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 NT5C1BQ96P26 610 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 SEPT5Q99719 369 aaPredicted RBP17.94■□□□□ 0.46
SYNE4-207ENST00000505054 RPP25Q9BUL9 199 aaKnown RBP17.94■□□□□ 0.46
SYNE4-207ENST00000505054 DDX23Q9BUQ8 820 aaKnown RBP17.94■□□□□ 0.46
SYNE4-207ENST00000505054 NAT10Q9H0A0 1025 aaKnown RBP17.94■□□□□ 0.46
SYNE4-207ENST00000505054 ABCB6Q9NP58 842 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 HCFC1R1Q9NWW0 138 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 GCNT4Q9P109 453 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 CEP72Q9P209 647 aa17.94■□□□□ 0.46
SYNE4-207ENST00000505054 KANSL1LA0AUZ9 987 aa17.93■□□□□ 0.46
SYNE4-207ENST00000505054 PRKCSHP14314 528 aaPredicted RBP17.93■□□□□ 0.46
SYNE4-207ENST00000505054 ZNF18P17022 549 aa17.93■□□□□ 0.46
SYNE4-207ENST00000505054 ATF6P18850 670 aa17.93■□□□□ 0.46
SYNE4-207ENST00000505054 MLF2Q15773 248 aaPredicted RBP17.93■□□□□ 0.46
SYNE4-207ENST00000505054 ZNF528Q3MIS6 628 aa17.93■□□□□ 0.46
SYNE4-207ENST00000505054 MGAT5BQ3V5L5 792 aa17.93■□□□□ 0.46
SYNE4-207ENST00000505054 CFAP221Q4G0U5 840 aa17.93■□□□□ 0.46
SYNE4-207ENST00000505054 VWA3BQ502W6 1294 aa17.93■□□□□ 0.46
SYNE4-207ENST00000505054 DGLUCYQ7Z3D6 616 aa17.93■□□□□ 0.46
SYNE4-207ENST00000505054 ACOT1Q86TX2 421 aa17.93■□□□□ 0.46
SYNE4-207ENST00000505054 SPATA2LQ8IUW3 424 aaPredicted RBP17.93■□□□□ 0.46
SYNE4-207ENST00000505054 ARHGEF19Q8IW93 802 aa17.93■□□□□ 0.46
SYNE4-207ENST00000505054 DHX40Q8IX18 779 aaKnown RBP17.93■□□□□ 0.46
SYNE4-207ENST00000505054 UBR7Q8N806 425 aa17.93■□□□□ 0.46
SYNE4-207ENST00000505054 FGF13Q92913 245 aa17.93■□□□□ 0.46
SYNE4-207ENST00000505054 KAT5Q92993 513 aa17.93■□□□□ 0.46
SYNE4-207ENST00000505054 FUBP3Q96I24 572 aaKnown RBP eCLIP17.93■□□□□ 0.46
SYNE4-207ENST00000505054 CRACR2AQ9BSW2 395 aa17.93■□□□□ 0.46
SYNE4-207ENST00000505054 ELOVL4Q9GZR5 314 aa17.93■□□□□ 0.46
SYNE4-207ENST00000505054 NDST4Q9H3R1 872 aa17.93■□□□□ 0.46
SYNE4-207ENST00000505054 CISHQ9NSE2 258 aa17.93■□□□□ 0.46
SYNE4-207ENST00000505054 TAB2Q9NYJ8 693 aa17.93■□□□□ 0.46
SYNE4-207ENST00000505054 DNMT3BQ9UBC3 853 aaKnown RBP17.93■□□□□ 0.46
SYNE4-207ENST00000505054 DNAH14Q0VDD8 3507 aa17.92■□□□□ 0.46
SYNE4-207ENST00000505054 GTPBP10A4D1E9 387 aaKnown RBP17.92■□□□□ 0.46
SYNE4-207ENST00000505054 CYP2F1P24903 491 aa17.92■□□□□ 0.46
SYNE4-207ENST00000505054 MAGEA9P43362 315 aa17.92■□□□□ 0.46
SYNE4-207ENST00000505054 TUFMP49411 452 aaKnown RBP17.92■□□□□ 0.46
SYNE4-207ENST00000505054 GPR15P49685 360 aa17.92■□□□□ 0.46
SYNE4-207ENST00000505054 ZNF165P49910 485 aa17.92■□□□□ 0.46
SYNE4-207ENST00000505054 PFKPQ01813 784 aa17.92■□□□□ 0.46
SYNE4-207ENST00000505054 KRT31Q15323 416 aa17.92■□□□□ 0.46
SYNE4-207ENST00000505054 MAPRE1Q15691 268 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms