RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 SFXN1Q9H9B4 322 aa5.32□□□□□ -1.56
CDH9-203ENST00000505045 UPF2Q9HAU5 1272 aaKnown RBP5.32□□□□□ -1.56
CDH9-203ENST00000505045 UBN1Q9NPG3 1134 aa5.32□□□□□ -1.56
CDH9-203ENST00000505045 ANKFY1Q9P2R3 1169 aa5.32□□□□□ -1.56
CDH9-203ENST00000505045 CLIC4Q9Y696 253 aa5.32□□□□□ -1.56
CDH9-203ENST00000505045 RIF1Q5UIP0 2472 aaKnown RBP5.31□□□□□ -1.56
CDH9-203ENST00000505045 GVINP1Q7Z2Y8 2422 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 SF3B1O75533 1304 aaKnown RBP eCLIP5.31□□□□□ -1.56
CDH9-203ENST00000505045 LAMA1P25391 3075 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 A0A087X0B3 334 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 TMEM221A6NGB7 291 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 M0R296 226 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 TMPRSS2O15393 492 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 FAM189A1O60320 539 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 GLUD1P00367 558 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 PLA2G4BP0C869 781 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 CXCL8P10145 99 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 FOSL1P15407 271 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 SYT1P21579 422 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 GUCY2CP25092 1073 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 TKTP29401 623 aaKnown RBP5.31□□□□□ -1.56
CDH9-203ENST00000505045 TNFSF9P41273 254 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 BRCC3P46736 316 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 EFNA5P52803 228 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 ITIH3Q06033 890 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 SPAG1Q07617 926 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 NCBP1Q09161 790 aaKnown RBP5.31□□□□□ -1.56
CDH9-203ENST00000505045 DHX8Q14562 1220 aaKnown RBP5.31□□□□□ -1.56
CDH9-203ENST00000505045 DCAF4L1Q3SXM0 396 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 LARP1BQ659C4 914 aaKnown RBP5.31□□□□□ -1.56
CDH9-203ENST00000505045 CES5AQ6NT32 575 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 SLC39A4Q6P5W5 647 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 GPR149Q86SP6 731 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 SYT2Q8N9I0 419 aaPredicted RBP5.31□□□□□ -1.56
CDH9-203ENST00000505045 KREMEN2Q8NCW0 462 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 EPSTI1Q96J88 318 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 SNX27Q96L92 541 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 IFT74Q96LB3 600 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 CLIC6Q96NY7 704 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 CLSTN3Q9BQT9 956 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 ADPGKQ9BRR6 497 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 YIPF2Q9BWQ6 316 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 EMILIN2Q9BXX0 1053 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 BCO2Q9BYV7 579 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 RAB34Q9BZG1 259 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 RXFP1Q9HBX9 757 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 KMT5AQ9NQR1 393 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 C1GALT1Q9NS00 363 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 KRT82Q9NSB4 513 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 TUBGCP4Q9UGJ1 667 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 DNM3Q9UQ16 869 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 TNFSF13BQ9Y275 285 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 COL4A2P08572 1712 aa5.31□□□□□ -1.56
CDH9-203ENST00000505045 SMIM28A0A1B0GU29 152 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 CCDC195A0A1B0GUA6 201 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 K7ERI5 159 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 NARSO43776 548 aaKnown RBP5.3□□□□□ -1.56
CDH9-203ENST00000505045 PRNPP04156 253 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 THP07101 528 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 NFICP08651 508 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 PLS3P13797 630 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 MARCKSP29966 332 aaPredicted RBP5.3□□□□□ -1.56
CDH9-203ENST00000505045 MCM2P49736 904 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 NCKAP1LP55160 1127 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 NTHL1P78549 312 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 CEBPZQ03701 1054 aaKnown RBP5.3□□□□□ -1.56
CDH9-203ENST00000505045 SIGLEC14Q08ET2 396 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 GIT2Q14161 759 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 MAP7Q14244 749 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 PSMD5Q16401 504 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 UPP1Q16831 310 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 USP41Q3LFD5 358 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 XKR4Q5GH76 650 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 FAM171A1Q5VUB5 890 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 ARL6IP4Q66PJ3 421 aaKnown RBP5.3□□□□□ -1.56
CDH9-203ENST00000505045 LILRA6Q6PI73 481 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 MPZL3Q6UWV2 235 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 ALKAL1Q6UXT8 129 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 CCDC149Q6ZUS6 474 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 DYMQ7RTS9 669 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 GPBP1Q86WP2 473 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 CEP57Q86XR8 500 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 HACE1Q8IYU2 909 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 FBXL6Q8N531 539 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 TDRD5Q8NAT2 981 aaKnown RBP5.3□□□□□ -1.56
CDH9-203ENST00000505045 PRSS33Q8NF86 280 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 LNX1Q8TBB1 728 aaPredicted RBP5.3□□□□□ -1.56
CDH9-203ENST00000505045 RSAD2Q8WXG1 361 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 DRC1Q96MC2 740 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 NECTIN4Q96NY8 510 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 MYADMQ96S97 322 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 OSBPL1AQ9BXW6 950 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 MRPL4Q9BYD3 311 aaKnown RBP5.3□□□□□ -1.56
CDH9-203ENST00000505045 FGFBP2Q9BYJ0 223 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 CRIM1Q9NZV1 1036 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 FBXO2Q9UK22 296 aaPredicted RBP5.3□□□□□ -1.56
CDH9-203ENST00000505045 FBXW11Q9UKB1 542 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 MTMR6Q9Y217 621 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 KIF3AQ9Y496 699 aa5.3□□□□□ -1.56
CDH9-203ENST00000505045 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms