RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 TRAV6A0A075B6T7 132 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 A0A088AWK7 358 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 ACOD1A6NK06 481 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 A8MV72 311 aaPredicted RBP7.58□□□□□ -1.2
CDH9-202ENST00000505020 INHBAP08476 426 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 TROVE2P10155 538 aaKnown RBP eCLIP7.58□□□□□ -1.2
CDH9-202ENST00000505020 AOAHP28039 575 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 TM4SF1P30408 202 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 GCH1P30793 250 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 MAGEA4P43358 317 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 PITPNBP48739 271 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 TUBA1BP68363 451 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 CHIT1Q13231 466 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 BYSLQ13895 437 aaKnown RBP7.58□□□□□ -1.2
CDH9-202ENST00000505020 GLRA4Q5JXX5 417 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 PRAMEF14Q5SWL7 426 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 DMRTA1Q5VZB9 504 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 TUBA1AQ71U36 451 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 H1FNTQ75WM6 255 aaPredicted RBP7.58□□□□□ -1.2
CDH9-202ENST00000505020 CNTROBQ8N137 903 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 OR6J1Q8NGC5 347 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 ERMNQ8TAM6 284 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 THAP4Q8WY91 577 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 FAM111AQ96PZ2 611 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 PKP4Q99569 1192 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 SH3GL2Q99962 352 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 ABCG8Q9H221 673 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 ARMT1Q9H993 441 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 GDAP2Q9NXN4 497 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 CWC15Q9P013 229 aaKnown RBP7.58□□□□□ -1.2
CDH9-202ENST00000505020 PCDHA4Q9UN74 947 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 MAN2B2Q9Y2E5 1009 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 NAALAD2Q9Y3Q0 740 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 EVC2Q86UK5 1308 aa7.58□□□□□ -1.2
CDH9-202ENST00000505020 FOXO6A8MYZ6 492 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 PRR5-ARHGAP8B1AHC4 643 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 TLR2O60603 784 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 SNRPB2P08579 225 aaKnown RBP7.57□□□□□ -1.2
CDH9-202ENST00000505020 HPGDP15428 266 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 CCR1P32246 355 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 PPARGP37231 505 aaPredicted RBP7.57□□□□□ -1.2
CDH9-202ENST00000505020 TAGLN2P37802 199 aaKnown RBP7.57□□□□□ -1.2
CDH9-202ENST00000505020 PIP4K2AP48426 406 aaPredicted RBP7.57□□□□□ -1.2
CDH9-202ENST00000505020 ZNF81P51508 661 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 GTF2A1P52655 376 aaPredicted RBP7.57□□□□□ -1.2
CDH9-202ENST00000505020 ATXN3P54252 364 aaPredicted RBP7.57□□□□□ -1.2
CDH9-202ENST00000505020 HDAC4P56524 1084 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 PLD1Q13393 1074 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 ITGA7Q13683 1181 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 TYSND1Q2T9J0 566 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 TDRD12Q587J7 1177 aaKnown RBP7.57□□□□□ -1.2
CDH9-202ENST00000505020 ATXN7L2Q5T6C5 722 aaPredicted RBP7.57□□□□□ -1.2
CDH9-202ENST00000505020 ERMARDQ5T6L9 678 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 CEP128Q6ZU80 1094 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 TXNRD3Q86VQ6 643 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 AOPEPQ8N6M6 819 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 IL31RAQ8NI17 732 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 CCDC110Q8TBZ0 833 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 FAM162AQ96A26 154 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 RMDN1Q96DB5 314 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 SPACA9Q96E40 222 aaPredicted RBP7.57□□□□□ -1.2
CDH9-202ENST00000505020 SGF29Q96ES7 293 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 NEIL1Q96FI4 390 aaPredicted RBP7.57□□□□□ -1.2
CDH9-202ENST00000505020 PLPPR2Q96GM1 343 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 C1orf159Q96HA4 380 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 CDK5RAP1Q96SZ6 601 aaKnown RBP7.57□□□□□ -1.2
CDH9-202ENST00000505020 SIKE1Q9BRV8 207 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 ZDHHC5Q9C0B5 715 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 VPS16Q9H269 839 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 C17orf75Q9HAS0 396 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 TLK1Q9UKI8 766 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 NAALADL1Q9UQQ1 740 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 HIF3AQ9Y2N7 669 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 ZNF451Q9Y4E5 1061 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 FHOD1Q9Y613 1164 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 TRAV34A0A0B4J273 112 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 NFKBIEO00221 500 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 HNRNPDLO14979 420 aaKnown RBP7.57□□□□□ -1.2
CDH9-202ENST00000505020 ERLIN1O75477 346 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 CLEC3BP05452 202 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 ITGA5P08648 1049 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 NF2P35240 595 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 HNF1BP35680 557 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 ECI1P42126 302 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 HAAOP46952 286 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 CARD18P57730 90 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 PAK1Q13153 545 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 NNTQ13423 1086 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 DPYSQ14117 519 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 RCN2Q14257 317 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 HFEQ30201 348 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 LRIT3Q3SXY7 679 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 SLC39A12Q504Y0 691 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 C4orf17Q53FE4 359 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 HHATQ5VTY9 493 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 PAPD4Q6PIY7 484 aaKnown RBP7.57□□□□□ -1.2
CDH9-202ENST00000505020 CACNA2D4Q7Z3S7 1137 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 FAM217AQ8IXS0 508 aa7.57□□□□□ -1.2
CDH9-202ENST00000505020 AGGF1Q8N302 714 aaeCLIP7.57□□□□□ -1.2
CDH9-202ENST00000505020 MARCH10Q8NA82 808 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms