RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 CCDC8Q9H0W5 538 aaPredicted RBP6.08□□□□□ -1.44
DEPDC1B-203ENST00000505017 LMO7Q8WWI1 1683 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 FANCIQ9NVI1 1328 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 WDR27A2RRH5 827 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 MPPED1O15442 326 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 PROP1O75360 226 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 CD1AP06126 327 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 ZNF853P0CG23 659 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 DYRK1AQ13627 763 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 AMOTQ4VCS5 1084 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 ZNF788Q6ZQV5 615 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 ZNF365Q70YC5 407 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 ADGRG5Q8IZF4 528 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 CFAP52Q8N1V2 620 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 PDPRQ8NCN5 879 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 FBXO41Q8TF61 875 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 COA7Q96BR5 231 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 UROC1Q96N76 676 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 MRPS18AQ9NVS2 196 aaKnown RBP6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 BABAM1Q9NWV8 329 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 ADAM21Q9UKJ8 722 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 PRKAB1Q9Y478 270 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 ENTPD2Q9Y5L3 495 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 ABCA3Q99758 1704 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 OVOS2A0A0G2JMS6 1433 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 LRRC37A3O60309 1634 aa6.07□□□□□ -1.44
DEPDC1B-203ENST00000505017 SOS1Q07889 1333 aaPredicted RBP6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 CCDC154A6NI56 674 aa6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 PRSS29PA6NIE9 313 aa6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 SGTAO43765 313 aa6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 MTHFD1P11586 935 aaKnown RBP6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 LPOP22079 712 aaPredicted RBP6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 RPS7P62081 194 aaKnown RBP6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 DSC2Q02487 901 aa6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 MTMR1Q13613 665 aa6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 PCBP2Q15366 365 aaKnown RBP eCLIP6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 ABCB5Q2M3G0 1257 aa6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 ALDH1L2Q3SY69 923 aa6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 KAZNQ674X7 775 aa6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 MIGA2Q7L4E1 593 aa6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 NECAB2Q7Z6G3 386 aa6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 CLNKQ7Z7G1 428 aa6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 RSPH3Q86UC2 560 aa6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 DPF1Q92782 380 aa6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 ATP8A1Q9Y2Q0 1164 aa6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 ROBO1Q9Y6N7 1651 aa6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 COL22A1Q8NFW1 1626 aaPredicted RBP6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 CACNA1FO60840 1977 aa6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 RGPD2P0DJD1 1756 aa6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 RGPD5Q99666 1765 aa6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 KIAA0232Q92628 1395 aa6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 MAP3K5Q99683 1374 aa6.06□□□□□ -1.44
DEPDC1B-203ENST00000505017 GABRDO14764 452 aa6.05□□□□□ -1.44
DEPDC1B-203ENST00000505017 PPP3CBP16298 524 aa6.05□□□□□ -1.44
DEPDC1B-203ENST00000505017 RARSP54136 660 aaKnown RBP6.05□□□□□ -1.44
DEPDC1B-203ENST00000505017 ODF1Q14990 250 aa6.05□□□□□ -1.44
DEPDC1B-203ENST00000505017 ACAP2Q15057 778 aa6.05□□□□□ -1.44
DEPDC1B-203ENST00000505017 TXNRD1Q16881 649 aa6.05□□□□□ -1.44
DEPDC1B-203ENST00000505017 PLEKHO1Q53GL0 409 aaPredicted RBP6.05□□□□□ -1.44
DEPDC1B-203ENST00000505017 SYDE2Q5VT97 1194 aa6.05□□□□□ -1.44
DEPDC1B-203ENST00000505017 HDAC10Q969S8 669 aa6.05□□□□□ -1.44
DEPDC1B-203ENST00000505017 LRRC59Q96AG4 307 aaKnown RBP6.05□□□□□ -1.44
DEPDC1B-203ENST00000505017 FBXL20Q96IG2 436 aa6.05□□□□□ -1.44
DEPDC1B-203ENST00000505017 TEKT5Q96M29 485 aa6.05□□□□□ -1.44
DEPDC1B-203ENST00000505017 CHMP4AQ9BY43 222 aa6.05□□□□□ -1.44
DEPDC1B-203ENST00000505017 IMPG2Q9BZV3 1241 aa6.05□□□□□ -1.44
DEPDC1B-203ENST00000505017 MKS1Q9NXB0 559 aa6.05□□□□□ -1.44
DEPDC1B-203ENST00000505017 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.05□□□□□ -1.44
DEPDC1B-203ENST00000505017 TRHDEQ9UKU6 1024 aa6.05□□□□□ -1.44
DEPDC1B-203ENST00000505017 KIF16BQ96L93 1317 aa6.04□□□□□ -1.44
DEPDC1B-203ENST00000505017 DNAJC9-AS1A6NH13 148 aa6.04□□□□□ -1.44
DEPDC1B-203ENST00000505017 NT5C1B-RDH14C9J2C7 533 aa6.04□□□□□ -1.44
DEPDC1B-203ENST00000505017 CHL1O00533 1208 aa6.04□□□□□ -1.44
DEPDC1B-203ENST00000505017 TOM1O60784 492 aa6.04□□□□□ -1.44
DEPDC1B-203ENST00000505017 WT1P19544 449 aaPredicted RBP6.04□□□□□ -1.44
DEPDC1B-203ENST00000505017 GRIA3P42263 894 aa6.04□□□□□ -1.44
DEPDC1B-203ENST00000505017 CDKN1CP49918 316 aaPredicted RBP6.04□□□□□ -1.44
DEPDC1B-203ENST00000505017 ANXA11P50995 505 aaKnown RBP6.04□□□□□ -1.44
DEPDC1B-203ENST00000505017 FPGSQ05932 587 aa6.04□□□□□ -1.44
DEPDC1B-203ENST00000505017 EXOSC9Q06265 439 aaKnown RBP6.04□□□□□ -1.44
DEPDC1B-203ENST00000505017 MTHFSDQ2M296 383 aaKnown RBP6.04□□□□□ -1.44
DEPDC1B-203ENST00000505017 SLC17A8Q8NDX2 589 aa6.04□□□□□ -1.44
DEPDC1B-203ENST00000505017 NSUN6Q8TEA1 469 aaKnown RBP6.04□□□□□ -1.44
DEPDC1B-203ENST00000505017 DDX17Q92841 729 aaKnown RBP6.04□□□□□ -1.44
DEPDC1B-203ENST00000505017 SARAFQ96BY9 339 aa6.04□□□□□ -1.44
DEPDC1B-203ENST00000505017 LTV1Q96GA3 475 aaPredicted RBP6.04□□□□□ -1.44
DEPDC1B-203ENST00000505017 CLPTM1LQ96KA5 538 aa6.04□□□□□ -1.44
DEPDC1B-203ENST00000505017 CRB1P82279 1406 aa6.04□□□□□ -1.44
DEPDC1B-203ENST00000505017 CEMIPQ8WUJ3 1361 aa6.04□□□□□ -1.44
DEPDC1B-203ENST00000505017 ADAMTS7Q9UKP4 1686 aa6.04□□□□□ -1.44
DEPDC1B-203ENST00000505017 AOX1Q06278 1338 aa6.03□□□□□ -1.44
DEPDC1B-203ENST00000505017 PKD1L3Q7Z443 1732 aa6.03□□□□□ -1.44
DEPDC1B-203ENST00000505017 CCDC195A0A1B0GUA6 201 aa6.03□□□□□ -1.44
DEPDC1B-203ENST00000505017 KLHL33A6NCF5 533 aa6.03□□□□□ -1.44
DEPDC1B-203ENST00000505017 LINC00473A8K010 186 aa6.03□□□□□ -1.44
DEPDC1B-203ENST00000505017 F2RL2O00254 374 aa6.03□□□□□ -1.44
DEPDC1B-203ENST00000505017 IPO8O15397 1037 aaKnown RBP6.03□□□□□ -1.44
DEPDC1B-203ENST00000505017 POU6F2P78424 691 aaPredicted RBP6.03□□□□□ -1.44
DEPDC1B-203ENST00000505017 ZNF844Q08AG5 666 aa6.03□□□□□ -1.44
DEPDC1B-203ENST00000505017 SNAPC2Q13487 334 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms