RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 CYFIP2Q96F07 1278 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 PKMYT1Q99640 499 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 BPIFA3Q9BQP9 254 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 MRPL45Q9BRJ2 306 aaKnown RBP10.46□□□□□ -0.73
NR1I3-220ENST00000505005 TUBGCP2Q9BSJ2 902 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 KCNK12Q9HB15 430 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 CISHQ9NSE2 258 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 CEP72Q9P209 647 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 LIMD1Q9UGP4 676 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 MRPS17Q9Y2R5 130 aaKnown RBP10.46□□□□□ -0.73
NR1I3-220ENST00000505005 NCANO14594 1321 aa10.46□□□□□ -0.73
NR1I3-220ENST00000505005 DENND4AQ7Z401 1863 aa10.46□□□□□ -0.74
NR1I3-220ENST00000505005 C2orf16Q68DN1 1984 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 TSC2P49815 1807 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 BECN2A8MW95 431 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 PRR33A8MZF0 331 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 NCAM2O15394 837 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 USP17L7P0C7H9 530 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 CCDC172P0C7W6 258 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 BDNFP23560 247 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 ACAT1P24752 427 aaKnown RBP10.45□□□□□ -0.74
NR1I3-220ENST00000505005 CYP2F1P24903 491 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 PRKCQQ04759 706 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 GOLGA8FQ08AF8 430 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 GOLGA8DPQ0D2H9 430 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 ZNF268Q14587 947 aaPredicted RBP10.45□□□□□ -0.74
NR1I3-220ENST00000505005 FILIP1LQ4L180 1135 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 ARHGAP29Q52LW3 1261 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 SGO2Q562F6 1265 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 TMEM31Q5JXX7 168 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 PRSS36Q5K4E3 855 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 ARHGAP17Q68EM7 881 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 NPAS3Q8IXF0 933 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 PPM1KQ8N3J5 372 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 CELF5Q8N6W0 485 aaKnown RBP10.45□□□□□ -0.74
NR1I3-220ENST00000505005 DNASE1L2Q92874 299 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 HEXIM2Q96MH2 286 aaKnown RBP10.45□□□□□ -0.74
NR1I3-220ENST00000505005 TRIM62Q9BVG3 475 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 TTLL2Q9BWV7 592 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 NDST4Q9H3R1 872 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 CSNK1G1Q9HCP0 422 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 SLC2A4RGQ9NR83 387 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 DUSP12Q9UNI6 340 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 PRUNE2Q8WUY3 3088 aa10.45□□□□□ -0.74
NR1I3-220ENST00000505005 TRAV19A0A0A6YYK7 116 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 SLC38A8A6NNN8 435 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 KCNJ18B7U540 433 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 RBAK-RBAKDNI3L0D1 243 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 MAN2B1O00754 1011 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 SLC9A3R1O14745 358 aaPredicted RBP10.44□□□□□ -0.74
NR1I3-220ENST00000505005 AP1G2O75843 785 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 WEE2P0C1S8 567 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 PSMC3P17980 439 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 YWHAQP27348 245 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 MAGEA9P43362 315 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 TUBP50607 506 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 CDH8P55286 799 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 PSMC1P62191 440 aaKnown RBP10.44□□□□□ -0.74
NR1I3-220ENST00000505005 NR1H3Q13133 447 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 KCNJ12Q14500 433 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 DPCR1Q3MIW9 517 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 PREPLQ4J6C6 727 aaPredicted RBP10.44□□□□□ -0.74
NR1I3-220ENST00000505005 CBWD6Q4V339 395 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 VWA3BQ502W6 1294 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 TCP11X2Q5H9J9 407 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 CBWD3Q5JTY5 395 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 CBWD5Q5RIA9 395 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 CC2D1AQ6P1N0 951 aaPredicted RBP10.44□□□□□ -0.74
NR1I3-220ENST00000505005 SCARA5Q6ZMJ2 495 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 TRIM67Q6ZTA4 783 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 ACOT1Q86TX2 421 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 MON1AQ86VX9 555 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 OSTM1Q86WC4 334 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 MFSD6LQ8IWD5 586 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 SUGP1Q8IWZ8 645 aaKnown RBP10.44□□□□□ -0.74
NR1I3-220ENST00000505005 SLC44A3Q8N4M1 653 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 ZNF276Q8N554 614 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 ANKRD52Q8NB46 1076 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 EEF2KMTQ96G04 330 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 ASB16Q96NS5 453 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 TMEM209Q96SK2 561 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 TRMT61BQ9BVS5 477 aaKnown RBP10.44□□□□□ -0.74
NR1I3-220ENST00000505005 DUSP16Q9BY84 665 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 MIS12Q9H081 205 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 SMYD3Q9H7B4 428 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 CRTAC1Q9NQ79 661 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 TLR8Q9NR97 1041 aaKnown RBP10.44□□□□□ -0.74
NR1I3-220ENST00000505005 GCNT4Q9P109 453 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 APEX2Q9UBZ4 518 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 FBXL21Q9UKT6 434 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 NFE2L3Q9Y4A8 694 aa10.44□□□□□ -0.74
NR1I3-220ENST00000505005 ARIH1Q9Y4X5 557 aaPredicted RBP10.44□□□□□ -0.74
NR1I3-220ENST00000505005 MYO10Q9HD67 2058 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 A0A1W2PRU2 124 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 LRRC10BA6NIK2 292 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 F8VP50 259 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 PES1O00541 588 aaKnown RBP10.43□□□□□ -0.74
NR1I3-220ENST00000505005 CHADO15335 359 aa10.43□□□□□ -0.74
NR1I3-220ENST00000505005 SART1O43290 800 aaKnown RBP10.43□□□□□ -0.74
NR1I3-220ENST00000505005 F11P03951 625 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms