RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 CUEDC2Q9H467 287 aa14.11□□□□□ -0.15
DDX41-204ENST00000504807 SLC39A2Q9NP94 309 aa14.11□□□□□ -0.15
DDX41-204ENST00000504807 CRTAC1Q9NQ79 661 aa14.11□□□□□ -0.15
DDX41-204ENST00000504807 RBM12Q9NTZ6 932 aaKnown RBP14.11□□□□□ -0.15
DDX41-204ENST00000504807 GTSE1Q9NYZ3 720 aa14.11□□□□□ -0.15
DDX41-204ENST00000504807 ASB3Q9Y575 518 aa14.11□□□□□ -0.15
DDX41-204ENST00000504807 PIAS3Q9Y6X2 628 aa14.11□□□□□ -0.15
DDX41-204ENST00000504807 EIF3DO15371 548 aaKnown RBP eCLIP14.1□□□□□ -0.15
DDX41-204ENST00000504807 ZNF806P0C7X5 589 aa14.1□□□□□ -0.15
DDX41-204ENST00000504807 CCNE1P24864 410 aa14.1□□□□□ -0.15
DDX41-204ENST00000504807 PNPLA4P41247 253 aa14.1□□□□□ -0.15
DDX41-204ENST00000504807 ME1P48163 572 aa14.1□□□□□ -0.15
DDX41-204ENST00000504807 CYP2J2P51589 502 aa14.1□□□□□ -0.15
DDX41-204ENST00000504807 NLRP12P59046 1061 aa14.1□□□□□ -0.15
DDX41-204ENST00000504807 PSMC1P62191 440 aaKnown RBP14.1□□□□□ -0.15
DDX41-204ENST00000504807 NAIF1Q69YI7 327 aaPredicted RBP14.1□□□□□ -0.15
DDX41-204ENST00000504807 MAMSTRQ6ZN01 415 aa14.1□□□□□ -0.15
DDX41-204ENST00000504807 ADGRF2Q8IZF7 708 aa14.1□□□□□ -0.15
DDX41-204ENST00000504807 THEM5Q8N1Q8 247 aa14.1□□□□□ -0.15
DDX41-204ENST00000504807 KIAA0895Q8NCT3 520 aa14.1□□□□□ -0.15
DDX41-204ENST00000504807 FAM200AQ8TCP9 573 aa14.1□□□□□ -0.15
DDX41-204ENST00000504807 SPPL2BQ8TCT7 592 aa14.1□□□□□ -0.15
DDX41-204ENST00000504807 DEPDC1BQ8WUY9 529 aa14.1□□□□□ -0.15
DDX41-204ENST00000504807 SLC22A12Q96S37 553 aa14.1□□□□□ -0.15
DDX41-204ENST00000504807 MRPL45Q9BRJ2 306 aaKnown RBP14.1□□□□□ -0.15
DDX41-204ENST00000504807 TRPV5Q9NQA5 729 aa14.1□□□□□ -0.15
DDX41-204ENST00000504807 TMEM30AQ9NV96 361 aa14.1□□□□□ -0.15
DDX41-204ENST00000504807 PCDHB5Q9Y5E4 795 aa14.1□□□□□ -0.15
DDX41-204ENST00000504807 GTF3C3Q9Y5Q9 886 aa14.1□□□□□ -0.15
DDX41-204ENST00000504807 SDK1Q7Z5N4 2213 aa14.1□□□□□ -0.15
DDX41-204ENST00000504807 ZNF233A6NK53 670 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 ZNF263O14978 683 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 PRPF40AO75400 957 aaKnown RBP14.09□□□□□ -0.15
DDX41-204ENST00000504807 TMEM191BP0C7N4 346 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 CHRNB1P11230 501 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 CNR2P34972 360 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 TUFMP49411 452 aaKnown RBP14.09□□□□□ -0.15
DDX41-204ENST00000504807 CACNA2D1P54289 1103 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 RBP5P82980 135 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 CYP24A1Q07973 514 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 STK4Q13043 487 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 SNRNP35Q16560 246 aaKnown RBP14.09□□□□□ -0.15
DDX41-204ENST00000504807 BMT2Q1RMZ1 405 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 RNF43Q68DV7 783 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 TXNDC8Q6A555 127 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 Q6ZS52 159 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 TRAPPC11Q7Z392 1133 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 LONP2Q86WA8 852 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 C2orf15Q8WU43 125 aaKnown RBP14.09□□□□□ -0.15
DDX41-204ENST00000504807 CACTINQ8WUQ7 758 aaKnown RBP14.09□□□□□ -0.15
DDX41-204ENST00000504807 LEO1Q8WVC0 666 aaPredicted RBP14.09□□□□□ -0.15
DDX41-204ENST00000504807 FAM3CQ92520 227 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 IRF7Q92985 503 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 USP13Q92995 863 aaPredicted RBP14.09□□□□□ -0.15
DDX41-204ENST00000504807 HPDLQ96IR7 371 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 ACBD6Q9BR61 282 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 IER2Q9BTL4 223 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 TASP1Q9H6P5 420 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 HPSEQ9Y251 543 aa14.09□□□□□ -0.15
DDX41-204ENST00000504807 NAV2Q8IVL1 2488 aa14.08□□□□□ -0.15
DDX41-204ENST00000504807 DENND4CQ5VZ89 1909 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 A0A1B0GVL5 298 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 MAN2B1O00754 1011 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 CHADO15335 359 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 HUS1O60921 280 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 PRR29P0C7W0 189 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 DLATP10515 647 aaKnown RBP14.08□□□□□ -0.16
DDX41-204ENST00000504807 PFKFB1P16118 471 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 PSMD6Q15008 389 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 TRIM68Q6AZZ1 485 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 FAM171BQ6P995 826 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 C19orf48Q6RUI8 117 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 ITIH5Q86UX2 942 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 WDR49Q8IV35 697 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 DCP1BQ8IZD4 617 aaKnown RBP14.08□□□□□ -0.16
DDX41-204ENST00000504807 TOP6BLQ8N6T0 577 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 MAB21L3Q8N8X9 362 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 CCDC127Q96BQ5 260 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 PAGE5Q96GU1 130 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 CGRRF1Q99675 332 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 GPR88Q9GZN0 384 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 XYLT2Q9H1B5 865 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 DPEP3Q9H4B8 488 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 HPS4Q9NQG7 708 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 MAGED2Q9UNF1 606 aaPredicted RBP14.08□□□□□ -0.16
DDX41-204ENST00000504807 F5P12259 2224 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 RALGAPA1Q6GYQ0 2036 aa14.08□□□□□ -0.16
DDX41-204ENST00000504807 NOL4O94818 638 aa14.07□□□□□ -0.16
DDX41-204ENST00000504807 WEE1P30291 646 aa14.07□□□□□ -0.16
DDX41-204ENST00000504807 USP46P62068 366 aa14.07□□□□□ -0.16
DDX41-204ENST00000504807 DLG4P78352 724 aa14.07□□□□□ -0.16
DDX41-204ENST00000504807 ZXDBP98169 803 aa14.07□□□□□ -0.16
DDX41-204ENST00000504807 TCEAL6Q6IPX3 200 aa14.07□□□□□ -0.16
DDX41-204ENST00000504807 KIAA1211LQ6NV74 962 aa14.07□□□□□ -0.16
DDX41-204ENST00000504807 PKN3Q6P5Z2 889 aa14.07□□□□□ -0.16
DDX41-204ENST00000504807 CMTM8Q8IZV2 173 aa14.07□□□□□ -0.16
DDX41-204ENST00000504807 TCEAL3Q969E4 200 aa14.07□□□□□ -0.16
DDX41-204ENST00000504807 MYLPFQ96A32 169 aa14.07□□□□□ -0.16
DDX41-204ENST00000504807 ANKRD36BP1Q96IX9 119 aa14.07□□□□□ -0.16
DDX41-204ENST00000504807 CYP2S1Q96SQ9 504 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms