RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 PCED1BQ96HM7 432 aa13.68□□□□□ -0.22
RNF4-206ENST00000504782 FNBP1Q96RU3 617 aa13.68□□□□□ -0.22
RNF4-206ENST00000504782 XYLT2Q9H1B5 865 aa13.68□□□□□ -0.22
RNF4-206ENST00000504782 FBRSL1Q9HCM7 1045 aaKnown RBP13.68□□□□□ -0.22
RNF4-206ENST00000504782 MAGEC2Q9UBF1 373 aaPredicted RBP13.68□□□□□ -0.22
RNF4-206ENST00000504782 CFAP45Q9UL16 551 aa13.68□□□□□ -0.22
RNF4-206ENST00000504782 CDH9Q9ULB4 789 aa13.68□□□□□ -0.22
RNF4-206ENST00000504782 KIAA1549LQ6ZVL6 1849 aa13.68□□□□□ -0.22
RNF4-206ENST00000504782 EML5Q05BV3 1969 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 FRYLO94915 3013 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 EP300Q09472 2414 aaPredicted RBP13.67□□□□□ -0.22
RNF4-206ENST00000504782 K7ESF4 209 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 PRR29P0C7W0 189 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 GNL1P36915 607 aaPredicted RBP13.67□□□□□ -0.22
RNF4-206ENST00000504782 MAGEA11P43364 429 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 ID4P47928 161 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 CXCL12P48061 93 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 CDH8P55286 799 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 DLG4P78352 724 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 CYP27A1Q02318 531 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 RUNX3Q13761 415 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 CCINQ13939 588 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 ITPRIPL2Q3MIP1 535 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 WDR72Q3MJ13 1102 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 MDH1BQ5I0G3 518 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 ATL3Q6DD88 541 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 FSTL4Q6MZW2 842 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 C12orf56Q8IXR9 622 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 CEP57L1Q8IYX8 460 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 ARL14EPQ8N8R7 260 aaPredicted RBP13.67□□□□□ -0.22
RNF4-206ENST00000504782 MRPS31Q92665 395 aaKnown RBP13.67□□□□□ -0.22
RNF4-206ENST00000504782 FUBP3Q96I24 572 aaKnown RBP eCLIP13.67□□□□□ -0.22
RNF4-206ENST00000504782 EPC1Q9H2F5 836 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 THG1LQ9NWX6 298 aaKnown RBP13.67□□□□□ -0.22
RNF4-206ENST00000504782 GCNT4Q9P109 453 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 NXF1Q9UBU9 619 aaKnown RBP13.67□□□□□ -0.22
RNF4-206ENST00000504782 SMG5Q9UPR3 1016 aaKnown RBP13.67□□□□□ -0.22
RNF4-206ENST00000504782 R3HCC1Q9Y3T6 440 aaKnown RBP13.67□□□□□ -0.22
RNF4-206ENST00000504782 DNAH14Q0VDD8 3507 aa13.67□□□□□ -0.22
RNF4-206ENST00000504782 LRRIQ3A6PVS8 624 aaPredicted RBP13.66□□□□□ -0.22
RNF4-206ENST00000504782 CHURC1-FNTBB4DL54 471 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 CLDN5O00501 218 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 EXOC3O60645 756 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 VNN1O95497 513 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 DDX6P26196 483 aaKnown RBP eCLIP13.66□□□□□ -0.22
RNF4-206ENST00000504782 GRIK1P39086 918 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 RAP1GAPP47736 663 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 FNTBP49356 437 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 CCR3P51677 355 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 PLCB2Q00722 1185 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 TDRD10Q5VZ19 366 aaKnown RBP13.66□□□□□ -0.22
RNF4-206ENST00000504782 HEATR6Q6AI08 1181 aaKnown RBP13.66□□□□□ -0.22
RNF4-206ENST00000504782 HS2ST1Q7LGA3 356 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 SPEM1Q8N4L4 309 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 OR6B3Q8NGW1 331 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 MYCBPAPQ8TBZ2 947 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 MSANTD3Q96H12 275 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 B3GNT5Q9BYG0 378 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 SDCBP2Q9H190 292 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 LINC00597Q9H2U6 94 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 SNX25Q9H3E2 840 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 KCTD10Q9H3F6 313 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 SMYD3Q9H7B4 428 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 DMAC2Q9NW81 257 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 HPSEQ9Y251 543 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 GTF3C3Q9Y5Q9 886 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 WNT6Q9Y6F9 365 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 WDR87Q6ZQQ6 2873 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 DMXL1Q9Y485 3027 aa13.66□□□□□ -0.22
RNF4-206ENST00000504782 GPR179Q6PRD1 2367 aa13.65□□□□□ -0.22
RNF4-206ENST00000504782 ANTXRLA6NF34 631 aa13.65□□□□□ -0.22
RNF4-206ENST00000504782 F8VP50 259 aa13.65□□□□□ -0.22
RNF4-206ENST00000504782 HRO43593 1189 aa13.65□□□□□ -0.22
RNF4-206ENST00000504782 TACC1O75410 805 aa13.65□□□□□ -0.22
RNF4-206ENST00000504782 C4BPAP04003 597 aaKnown RBP13.65□□□□□ -0.22
RNF4-206ENST00000504782 PDIA4P13667 645 aaKnown RBP13.65□□□□□ -0.22
RNF4-206ENST00000504782 PTPN1P18031 435 aaKnown RBP13.65□□□□□ -0.22
RNF4-206ENST00000504782 TGM1P22735 817 aa13.65□□□□□ -0.22
RNF4-206ENST00000504782 CMA1P23946 247 aa13.65□□□□□ -0.22
RNF4-206ENST00000504782 SNRPFP62306 86 aaKnown RBP13.65□□□□□ -0.22
RNF4-206ENST00000504782 LRRC32Q14392 662 aa13.65□□□□□ -0.22
RNF4-206ENST00000504782 ZNF268Q14587 947 aaPredicted RBP13.65□□□□□ -0.22
RNF4-206ENST00000504782 ZNF77Q15935 545 aa13.65□□□□□ -0.22
RNF4-206ENST00000504782 DGKKQ5KSL6 1271 aa13.65□□□□□ -0.22
RNF4-206ENST00000504782 C4orf50Q6ZRC1 276 aa13.65□□□□□ -0.22
RNF4-206ENST00000504782 PARD3BQ8TEW8 1205 aa13.65□□□□□ -0.22
RNF4-206ENST00000504782 EZH1Q92800 747 aaPredicted RBP13.65□□□□□ -0.22
RNF4-206ENST00000504782 SPATA17Q96L03 361 aa13.65□□□□□ -0.22
RNF4-206ENST00000504782 ZNF518BQ9C0D4 1074 aa13.65□□□□□ -0.22
RNF4-206ENST00000504782 EXOC1Q9NV70 894 aa13.65□□□□□ -0.22
RNF4-206ENST00000504782 NCDNQ9UBB6 729 aa13.65□□□□□ -0.22
RNF4-206ENST00000504782 UXTQ9UBK9 157 aaPredicted RBP13.65□□□□□ -0.22
RNF4-206ENST00000504782 TRAV19A0A0A6YYK7 116 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 PHACTR2O75167 634 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 EGFP01133 1207 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 CKMP06732 381 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 USP17L7P0C7H9 530 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 PXNP49023 591 aaPredicted RBP13.64□□□□□ -0.23
RNF4-206ENST00000504782 GALK1P51570 392 aa13.64□□□□□ -0.23
RNF4-206ENST00000504782 NDUFA8P51970 172 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms