RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 KIAA1549LQ6ZVL6 1849 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 MAN2B1O00754 1011 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 MAPK13O15264 365 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 PDGFRBP09619 1106 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 RFX1P22670 979 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 BDNFP23560 247 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 CCNE1P24864 410 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 DDX6P26196 483 aaKnown RBP eCLIP14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 CTHP32929 405 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 RPL10AP62906 217 aaKnown RBP14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 ZXDBP98169 803 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 TNK2Q07912 1038 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 MTAPQ13126 283 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 ZNF268Q14587 947 aaPredicted RBP14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 ARHGAP29Q52LW3 1261 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 VSTM1Q6UX27 236 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 PAQR9Q6ZVX9 377 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 SPATA2LQ8IUW3 424 aaPredicted RBP14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 FMR1NBQ8N0W7 255 aaPredicted RBP14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 MAB21L3Q8N8X9 362 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 TMC2Q8TDI7 906 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 FAM3CQ92520 227 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 CEP295NLQ96MC4 621 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 SMYD3Q9H7B4 428 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 FBXO4Q9UKT5 387 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 R4GN57 208 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 WDR87Q6ZQQ6 2873 aa14.95□□□□□ -0.02
PDLIM7-211ENST00000504318 TULP1O00294 542 aaPredicted RBP14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 LILRB5O75023 590 aa14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 AKAP3O75969 853 aa14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 GNL1P36915 607 aaPredicted RBP14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 USP4Q13107 963 aa14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 ZNF77Q15935 545 aa14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 MDH1BQ5I0G3 518 aa14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 C4orf50Q6ZRC1 276 aa14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 GUF1Q8N442 669 aaKnown RBP14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 CELF5Q8N6W0 485 aaKnown RBP14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 SUMF1Q8NBK3 374 aa14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 ZBTB44Q8NCP5 570 aa14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 SPATA20Q8TB22 786 aa14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 NKD2Q969F2 451 aaPredicted RBP14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 MSANTD3Q96H12 275 aa14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 C8orf48Q96LL4 319 aa14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 MMS19Q96T76 1030 aa14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 MAGEC2Q9UBF1 373 aaPredicted RBP14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 NDRG2Q9UN36 371 aaKnown RBP14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 MAGED2Q9UNF1 606 aaPredicted RBP14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 MRPS17Q9Y2R5 130 aaKnown RBP14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 ATP6V1DQ9Y5K8 247 aa14.94□□□□□ -0.02
PDLIM7-211ENST00000504318 SPECC1L-ADORA2AF8WAN1 911 aa14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 TCF3P15923 654 aa14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 PTPN1P18031 435 aaKnown RBP14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 AP3M2P53677 418 aa14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 CDH8P55286 799 aa14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 NOP14P78316 857 aaKnown RBP14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 NCOA4Q13772 614 aa14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 CCINQ13939 588 aa14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 MAPRE1Q15691 268 aaKnown RBP14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 SV2AQ7L0J3 742 aa14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 B3GALNT2Q8NCR0 500 aa14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 SYAP1Q96A49 352 aaPredicted RBP14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 GCNAQ96QF7 691 aa14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 CYP2S1Q96SQ9 504 aa14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 B3GNT5Q9BYG0 378 aa14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 ZNF518BQ9C0D4 1074 aa14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 C8orf33Q9H7E9 229 aaPredicted RBP14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 TDP1Q9NUW8 608 aa14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 SPATA6Q9NWH7 488 aaPredicted RBP14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 C2orf42Q9NWW7 574 aa14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 UXTQ9UBK9 157 aaPredicted RBP14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 DNAH14Q0VDD8 3507 aa14.93□□□□□ -0.02
PDLIM7-211ENST00000504318 SPTBN4Q9H254 2564 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 DMXL1Q9Y485 3027 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 C2orf78A6NCI8 922 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 F8VP50 259 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 CLDN5O00501 218 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 IKBKBO14920 756 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 OLFM2O95897 454 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 ASS1P00966 412 aaKnown RBP14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 ASPAP45381 313 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 RAP1GAPP47736 663 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 TNNC1P63316 161 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 PLCB2Q00722 1185 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 ENPEPQ07075 957 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 PPP3CAQ08209 521 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 ZNF699Q32M78 642 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 TRIM68Q6AZZ1 485 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 RALGPS2Q86X27 583 aaPredicted RBP14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 SCN4BQ8IWT1 228 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 ZC3H3Q8IXZ2 948 aaKnown RBP14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 OR6B3Q8NGW1 331 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 MRPS31Q92665 395 aaKnown RBP14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 IER2Q9BTL4 223 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 SEMA4AQ9H3S1 761 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 KIF9Q9HAQ2 790 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 LMAN1LQ9HAT1 526 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 APOBEC3GQ9HC16 384 aaKnown RBP14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 RBM12Q9NTZ6 932 aaKnown RBP14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 IL37Q9NZH6 218 aa14.92□□□□□ -0.02
PDLIM7-211ENST00000504318 NXF1Q9UBU9 619 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms