RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 CHST7Q9NS84 486 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 CYTH4Q9UIA0 394 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 ANAPC5Q9UJX4 755 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 TSPAN16Q9UKR8 245 aa10.31□□□□□ -0.76
COL1A1-210ENST00000504289 PIN4Q9Y237 131 aaKnown RBP10.31□□□□□ -0.76
COL1A1-210ENST00000504289 PDCD11Q14690 1871 aaKnown RBP10.3□□□□□ -0.76
COL1A1-210ENST00000504289 LRRD1A4D1F6 860 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 C3orf70A6NLC5 250 aaPredicted RBP10.3□□□□□ -0.76
COL1A1-210ENST00000504289 C2CD4BA6NLJ0 364 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 KPNA7A9QM74 516 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 FAM155AB1AL88 458 aaPredicted RBP10.3□□□□□ -0.76
COL1A1-210ENST00000504289 TREHO43280 583 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 ZNF189O75820 626 aaPredicted RBP10.3□□□□□ -0.76
COL1A1-210ENST00000504289 AGTP01019 485 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 CYBAP13498 195 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 GPD1P21695 349 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 WARSP23381 471 aaKnown RBP10.3□□□□□ -0.76
COL1A1-210ENST00000504289 KDELR1P24390 212 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 KLRC2P26717 231 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 ATP5DP30049 168 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 ADCY8P40145 1251 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 KCNJ1P48048 391 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 IRAK1P51617 712 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 BCAT1P54687 386 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 GYS2P54840 703 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 MRPS6P82932 125 aaKnown RBP10.3□□□□□ -0.76
COL1A1-210ENST00000504289 MORF4L2Q15014 288 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 OASLQ15646 514 aaKnown RBP10.3□□□□□ -0.76
COL1A1-210ENST00000504289 CCL14Q16627 93 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 KRT71Q3SY84 523 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 FAM47CQ5HY64 1035 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 CYP4A22Q5TCH4 519 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 MFSD5Q6N075 450 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 PHLDB2Q86SQ0 1253 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 ALLCQ8N6M5 410 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 ANKRD52Q8NB46 1076 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 SLC35B2Q8TB61 432 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 SLC35F5Q8WV83 523 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 RNF25Q96BH1 459 aaPredicted RBP10.3□□□□□ -0.76
COL1A1-210ENST00000504289 TLCD1Q96CP7 247 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 ZMAT2Q96NC0 199 aaKnown RBP10.3□□□□□ -0.76
COL1A1-210ENST00000504289 TTC25Q96NG3 672 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 PPP1R16BQ96T49 567 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 EIF2AQ9BY44 585 aaKnown RBP10.3□□□□□ -0.76
COL1A1-210ENST00000504289 EPB41L4BQ9H329 900 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 CDHR5Q9HBB8 845 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 PCDH9Q9HC56 1237 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 NMRK2Q9NPI5 230 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 GTF2IRD1Q9UHL9 959 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 PTPN22Q9Y2R2 807 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 TRPV2Q9Y5S1 764 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 SNX9Q9Y5X1 595 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 SCN10AQ9Y5Y9 1956 aa10.3□□□□□ -0.76
COL1A1-210ENST00000504289 GOLGA8SH3BPF8 625 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 APOC4-APOC2K7ER74 178 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 EIF3HO15372 352 aaKnown RBP eCLIP10.29□□□□□ -0.76
COL1A1-210ENST00000504289 SEPT4O43236 478 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 RIPK2O43353 540 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 HUS1O60921 280 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 TRUB2O95900 331 aaKnown RBP10.29□□□□□ -0.76
COL1A1-210ENST00000504289 APOC2P02655 101 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 ABHD2P08910 425 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 FGFR4P22455 802 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 CST5P28325 142 aaPredicted RBP10.29□□□□□ -0.76
COL1A1-210ENST00000504289 STIP1P31948 543 aaKnown RBP10.29□□□□□ -0.76
COL1A1-210ENST00000504289 GNL1P36915 607 aaPredicted RBP10.29□□□□□ -0.76
COL1A1-210ENST00000504289 PTPN9P43378 593 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 RAB27AP51159 221 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 SLC8A3P57103 927 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 SLC6A3Q01959 620 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 BST2Q10589 180 aaKnown RBP10.29□□□□□ -0.76
COL1A1-210ENST00000504289 CRHR2Q13324 411 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 ZSCAN26Q16670 478 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 SOWAHAQ2M3V2 549 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 GOLGA7BQ2TAP0 167 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 ZFYVE27Q5T4F4 411 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 FAM102AQ5T9C2 384 aaPredicted RBP10.29□□□□□ -0.76
COL1A1-210ENST00000504289 HIBCHQ6NVY1 386 aaPredicted RBP10.29□□□□□ -0.76
COL1A1-210ENST00000504289 C4orf22Q6V702 233 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 SLC26A9Q7LBE3 791 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 GSTA5Q7RTV2 222 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 SERINC5Q86VE9 423 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 SPATS2Q86XZ4 545 aaKnown RBP10.29□□□□□ -0.76
COL1A1-210ENST00000504289 PSTKQ8IV42 348 aaKnown RBP10.29□□□□□ -0.76
COL1A1-210ENST00000504289 TMEM86AQ8N2M4 240 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 ZCCHC9Q8N567 271 aaKnown RBP10.29□□□□□ -0.76
COL1A1-210ENST00000504289 APPL2Q8NEU8 664 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 JOSD2Q8TAC2 188 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 RAPGEF5Q92565 580 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 CENPTQ96BT3 561 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 CCDC114Q96M63 670 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 SERPINB12Q96P63 405 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 CCDC77Q9BR77 488 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 HERPUD2Q9BSE4 406 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 HEMGNQ9BXL5 484 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 SNX25Q9H3E2 840 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 NXF3Q9H4D5 531 aaKnown RBP10.29□□□□□ -0.76
COL1A1-210ENST00000504289 METTL5Q9NRN9 209 aaKnown RBP10.29□□□□□ -0.76
COL1A1-210ENST00000504289 HMGXB4Q9UGU5 601 aa10.29□□□□□ -0.76
COL1A1-210ENST00000504289 USP18Q9UMW8 372 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms