RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 PLA2G6O60733 806 aa5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 SKAP2O75563 359 aaPredicted RBP5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 CFIP05156 583 aa5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 TACR2P21452 398 aa5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 FAM189BP81408 668 aa5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 TUBB3Q13509 450 aa5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 TUBA3CQ13748 450 aa5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 E2F2Q14209 437 aa5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 KRT72Q14CN4 511 aa5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 GEN1Q17RS7 908 aa5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 LSM12Q3MHD2 195 aaKnown RBP5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 INO80DQ53TQ3 878 aaPredicted RBP5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 PLAG1Q6DJT9 500 aa5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 TUBA3EQ6PEY2 450 aa5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 MYCT1Q8N699 235 aa5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 ATG16L2Q8NAA4 619 aa5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 CPEB3Q8NE35 698 aaKnown RBP5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 C18orf8Q96DM3 657 aa5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 SNX27Q96L92 541 aa5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 PTDSS2Q9BVG9 487 aa5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 STK33Q9BYT3 514 aa5.86□□□□□ -1.47
TRAPPC13-205ENST00000504243 GAGE12BA1L429 117 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 GAGE12HA6NDE8 117 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 UNC119BA6NIH7 251 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 AQP7P3A6NL99 342 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 CLCA1A8K7I4 914 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 E7ENX8 843 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 NPHP1O15259 732 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 CCP110O43303 1012 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 SRGAP2O75044 1071 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 PPFIA4O75335 1185 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 A1BGP04217 495 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 C6P13671 934 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 YY1P25490 414 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 DDX6P26196 483 aaKnown RBP eCLIP5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 ZXDAP98168 799 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 TAP2Q03519 686 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 KCNAB1Q14722 419 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 RBM20Q5T481 1227 aaKnown RBP5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 B3GNTL1Q67FW5 361 aaPredicted RBP5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 RGS7BPQ6MZT1 257 aaPredicted RBP5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 CRTC1Q6UUV9 634 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 USP51Q70EK9 711 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 SLC15A3Q8IY34 581 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 ADGRG5Q8IZF4 528 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 FAM9AQ8IZU1 332 aaPredicted RBP5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 ZNF276Q8N554 614 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 VGLL2Q8N8G2 317 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 IPO4Q8TEX9 1081 aaKnown RBP5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 TPSD1Q9BZJ3 242 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 AS3MTQ9HBK9 375 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 GALNT9Q9HCQ5 603 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 XPNPEP3Q9NQH7 507 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 SERTAD3Q9UJW9 196 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 NDRG4Q9ULP0 352 aaKnown RBP5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 CDY1Q9Y6F8 540 aa5.85□□□□□ -1.47
TRAPPC13-205ENST00000504243 A0A1W2PS29 197 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 GRXCR1A8MXD5 290 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 RRP9O43818 475 aaKnown RBP5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 FZD7O75084 574 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 COQ9O75208 318 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 CDKL5O76039 1030 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 LAG3P18627 525 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 PRKAR1BP31321 381 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 ATICP31939 592 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 DGKEP52429 567 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 COPAP53621 1224 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 MYO1EQ12965 1108 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 HLXQ14774 488 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 CYP2A13Q16696 494 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 PFKFB4Q16877 469 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 ZIK1Q3SY52 487 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 SFRP4Q6FHJ7 346 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 LRRC55Q6ZSA7 311 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 MICALCLQ6ZW33 695 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 USP49Q70CQ1 688 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 GLIS1Q8NBF1 620 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 DNAJB14Q8TBM8 379 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 TMEM171Q8WVE6 324 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 PAGR1Q9BTK6 254 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 DHX36Q9H2U1 1008 aaKnown RBP5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 GBA2Q9HCG7 927 aaPredicted RBP5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 OBP2BQ9NPH6 170 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 TM7SF3Q9NS93 570 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 RGL1Q9NZL6 768 aa5.84□□□□□ -1.47
TRAPPC13-205ENST00000504243 GOLGA6L3A6NEY3 463 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 PIP5K1BO14986 540 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 ZFPL1O95159 310 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 CSTBP04080 98 aaKnown RBP5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 KCNA3P22001 575 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 PTGS2P35354 604 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 DGCR2P98153 550 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 NPY5RQ15761 445 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 RAB30Q15771 203 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 PTCHD3Q3KNS1 767 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 TUBB8Q3ZCM7 444 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 TIGD2Q4W5G0 525 aa5.83□□□□□ -1.48
TRAPPC13-205ENST00000504243 HSP90AB4PQ58FF6 505 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms