RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 SYAP1Q96A49 352 aaPredicted RBP23.55■■□□□ 1.36
LSM6-203ENST00000503982 CHAMP1Q96JM3 812 aa23.55■■□□□ 1.36
LSM6-203ENST00000503982 MRPL45Q9BRJ2 306 aaKnown RBP23.55■■□□□ 1.36
LSM6-203ENST00000503982 CRTAC1Q9NQ79 661 aa23.55■■□□□ 1.36
LSM6-203ENST00000503982 PRMT8Q9NR22 394 aaPredicted RBP23.55■■□□□ 1.36
LSM6-203ENST00000503982 TRAV19A0A0A6YYK7 116 aa23.54■■□□□ 1.36
LSM6-203ENST00000503982 A8MXQ7 604 aa23.54■■□□□ 1.36
LSM6-203ENST00000503982 NRLP54845 237 aa23.54■■□□□ 1.36
LSM6-203ENST00000503982 MYL6P60660 151 aa23.54■■□□□ 1.36
LSM6-203ENST00000503982 DGKKQ5KSL6 1271 aa23.54■■□□□ 1.36
LSM6-203ENST00000503982 TRIM68Q6AZZ1 485 aa23.54■■□□□ 1.36
LSM6-203ENST00000503982 TXNDC11Q6PKC3 985 aa23.54■■□□□ 1.36
LSM6-203ENST00000503982 RUBCNQ92622 972 aa23.54■■□□□ 1.36
LSM6-203ENST00000503982 TRMT2BQ96GJ1 504 aaKnown RBP23.54■■□□□ 1.36
LSM6-203ENST00000503982 EBF3Q9H4W6 596 aa23.54■■□□□ 1.36
LSM6-203ENST00000503982 MYH10P35580 1976 aa23.54■■□□□ 1.36
LSM6-203ENST00000503982 CFAP54Q96N23 3096 aa23.53■■□□□ 1.36
LSM6-203ENST00000503982 TRIM66O15016 1216 aa23.53■■□□□ 1.36
LSM6-203ENST00000503982 USP17L7P0C7H9 530 aa23.53■■□□□ 1.36
LSM6-203ENST00000503982 CXCL12P48061 93 aa23.53■■□□□ 1.36
LSM6-203ENST00000503982 RUNX3Q13761 415 aa23.53■■□□□ 1.36
LSM6-203ENST00000503982 KCNB1Q14721 858 aa23.53■■□□□ 1.36
LSM6-203ENST00000503982 ZNF699Q32M78 642 aa23.53■■□□□ 1.36
LSM6-203ENST00000503982 CEP135Q66GS9 1140 aa23.53■■□□□ 1.36
LSM6-203ENST00000503982 VSTM1Q6UX27 236 aa23.53■■□□□ 1.36
LSM6-203ENST00000503982 SCARA5Q6ZMJ2 495 aa23.53■■□□□ 1.36
LSM6-203ENST00000503982 ZNF687Q8N1G0 1237 aa23.53■■□□□ 1.36
LSM6-203ENST00000503982 KIAA0895Q8NCT3 520 aa23.53■■□□□ 1.36
LSM6-203ENST00000503982 ZNF516Q92618 1163 aa23.53■■□□□ 1.36
LSM6-203ENST00000503982 HELZP42694 1942 aaKnown RBP23.53■■□□□ 1.36
LSM6-203ENST00000503982 CALUO43852 315 aaPredicted RBP23.52■■□□□ 1.36
LSM6-203ENST00000503982 TACC1O75410 805 aa23.52■■□□□ 1.36
LSM6-203ENST00000503982 ABL1P00519 1130 aa23.52■■□□□ 1.36
LSM6-203ENST00000503982 RPN1P04843 607 aaKnown RBP23.52■■□□□ 1.36
LSM6-203ENST00000503982 ATICP31939 592 aa23.52■■□□□ 1.36
LSM6-203ENST00000503982 IFRD2Q12894 506 aaPredicted RBP23.52■■□□□ 1.36
LSM6-203ENST00000503982 LIMS2Q7Z4I7 341 aa23.52■■□□□ 1.36
LSM6-203ENST00000503982 DCLK2Q8N568 766 aa23.52■■□□□ 1.36
LSM6-203ENST00000503982 MYCBPAPQ8TBZ2 947 aa23.52■■□□□ 1.36
LSM6-203ENST00000503982 SECISBP2LQ93073 1101 aaKnown RBP23.52■■□□□ 1.36
LSM6-203ENST00000503982 PCED1BQ96HM7 432 aa23.52■■□□□ 1.36
LSM6-203ENST00000503982 MED10Q9BTT4 135 aa23.52■■□□□ 1.36
LSM6-203ENST00000503982 FAM126AQ9BYI3 521 aaPredicted RBP23.52■■□□□ 1.36
LSM6-203ENST00000503982 EHD2Q9NZN4 543 aa23.52■■□□□ 1.36
LSM6-203ENST00000503982 RAB23Q9ULC3 237 aa23.52■■□□□ 1.36
LSM6-203ENST00000503982 ATG2BQ96BY7 2078 aa23.52■■□□□ 1.35
LSM6-203ENST00000503982 LRRIQ3A6PVS8 624 aaPredicted RBP23.51■■□□□ 1.35
LSM6-203ENST00000503982 SOBPA7XYQ1 873 aa23.51■■□□□ 1.35
LSM6-203ENST00000503982 TADA3O75528 432 aa23.51■■□□□ 1.35
LSM6-203ENST00000503982 KIF20AO95235 890 aa23.51■■□□□ 1.35
LSM6-203ENST00000503982 PTPN1P18031 435 aaKnown RBP23.51■■□□□ 1.35
LSM6-203ENST00000503982 IFNAR2P48551 515 aa23.51■■□□□ 1.35
LSM6-203ENST00000503982 AP3M2P53677 418 aa23.51■■□□□ 1.35
LSM6-203ENST00000503982 AMPD2Q01433 879 aa23.51■■□□□ 1.35
LSM6-203ENST00000503982 SATB1Q01826 763 aa23.51■■□□□ 1.35
LSM6-203ENST00000503982 FAM160A1Q05DH4 1040 aa23.51■■□□□ 1.35
LSM6-203ENST00000503982 ZNF667Q5HYK9 610 aa23.51■■□□□ 1.35
LSM6-203ENST00000503982 Q6ZS52 159 aa23.51■■□□□ 1.35
LSM6-203ENST00000503982 DENND5BQ6ZUT9 1274 aa23.51■■□□□ 1.35
LSM6-203ENST00000503982 SPEM1Q8N4L4 309 aa23.51■■□□□ 1.35
LSM6-203ENST00000503982 ARL14EPQ8N8R7 260 aaPredicted RBP23.51■■□□□ 1.35
LSM6-203ENST00000503982 SPATA17Q96L03 361 aa23.51■■□□□ 1.35
LSM6-203ENST00000503982 MYRFLQ96LU7 910 aa23.51■■□□□ 1.35
LSM6-203ENST00000503982 CYP2S1Q96SQ9 504 aa23.51■■□□□ 1.35
LSM6-203ENST00000503982 DPEP3Q9H4B8 488 aa23.51■■□□□ 1.35
LSM6-203ENST00000503982 TRPM5Q9NZQ8 1165 aa23.51■■□□□ 1.35
LSM6-203ENST00000503982 FRMD4BQ9Y2L6 1034 aa23.51■■□□□ 1.35
LSM6-203ENST00000503982 NR3C1P04150 777 aa23.5■■□□□ 1.35
LSM6-203ENST00000503982 MYL1P05976 194 aa23.5■■□□□ 1.35
LSM6-203ENST00000503982 ID4P47928 161 aa23.5■■□□□ 1.35
LSM6-203ENST00000503982 NDUFA8P51970 172 aa23.5■■□□□ 1.35
LSM6-203ENST00000503982 NCOA4Q13772 614 aa23.5■■□□□ 1.35
LSM6-203ENST00000503982 ZNF268Q14587 947 aaPredicted RBP23.5■■□□□ 1.35
LSM6-203ENST00000503982 MTF1Q14872 753 aa23.5■■□□□ 1.35
LSM6-203ENST00000503982 TDRD10Q5VZ19 366 aaKnown RBP23.5■■□□□ 1.35
LSM6-203ENST00000503982 ZBTB44Q8NCP5 570 aa23.5■■□□□ 1.35
LSM6-203ENST00000503982 PARD3BQ8TEW8 1205 aa23.5■■□□□ 1.35
LSM6-203ENST00000503982 SCAND2PQ9GZW5 306 aaPredicted RBP23.5■■□□□ 1.35
LSM6-203ENST00000503982 DUS2Q9NX74 493 aaKnown RBP23.5■■□□□ 1.35
LSM6-203ENST00000503982 SMG5Q9UPR3 1016 aaKnown RBP23.5■■□□□ 1.35
LSM6-203ENST00000503982 HPSEQ9Y251 543 aa23.5■■□□□ 1.35
LSM6-203ENST00000503982 C2orf78A6NCI8 922 aa23.49■■□□□ 1.35
LSM6-203ENST00000503982 F8VP50 259 aa23.49■■□□□ 1.35
LSM6-203ENST00000503982 FAM163BP0C2L3 166 aa23.49■■□□□ 1.35
LSM6-203ENST00000503982 PRR29P0C7W0 189 aa23.49■■□□□ 1.35
LSM6-203ENST00000503982 ARSAP15289 507 aa23.49■■□□□ 1.35
LSM6-203ENST00000503982 HDCP19113 662 aa23.49■■□□□ 1.35
LSM6-203ENST00000503982 RAP1GAPP47736 663 aa23.49■■□□□ 1.35
LSM6-203ENST00000503982 PDE6CP51160 858 aa23.49■■□□□ 1.35
LSM6-203ENST00000503982 GRSF1Q12849 480 aaKnown RBP eCLIP23.49■■□□□ 1.35
LSM6-203ENST00000503982 PDGFRLQ15198 375 aa23.49■■□□□ 1.35
LSM6-203ENST00000503982 PRR23BQ6ZRT6 265 aa23.49■■□□□ 1.35
LSM6-203ENST00000503982 CPA6Q8N4T0 437 aa23.49■■□□□ 1.35
LSM6-203ENST00000503982 SUMF1Q8NBK3 374 aa23.49■■□□□ 1.35
LSM6-203ENST00000503982 PLEKHO2Q8TD55 490 aa23.49■■□□□ 1.35
LSM6-203ENST00000503982 EXOC4Q96A65 974 aa23.49■■□□□ 1.35
LSM6-203ENST00000503982 FAM83CQ9BQN1 747 aa23.49■■□□□ 1.35
LSM6-203ENST00000503982 ELOVL4Q9GZR5 314 aa23.49■■□□□ 1.35
LSM6-203ENST00000503982 SMYD3Q9H7B4 428 aa23.49■■□□□ 1.35
LSM6-203ENST00000503982 HPS4Q9NQG7 708 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms