RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 RPL10AP62906 217 aaKnown RBP17.05■□□□□ 0.32
PDLIM7-210ENST00000503827 ANKRD1Q15327 319 aa17.05■□□□□ 0.32
PDLIM7-210ENST00000503827 MAP7D1Q3KQU3 841 aa17.05■□□□□ 0.32
PDLIM7-210ENST00000503827 EOGTQ5NDL2 527 aa17.05■□□□□ 0.32
PDLIM7-210ENST00000503827 ALLCQ8N6M5 410 aa17.05■□□□□ 0.32
PDLIM7-210ENST00000503827 NECAB1Q8N987 351 aa17.05■□□□□ 0.32
PDLIM7-210ENST00000503827 HMGB4Q8WW32 186 aa17.05■□□□□ 0.32
PDLIM7-210ENST00000503827 TRMT2BQ96GJ1 504 aaKnown RBP17.05■□□□□ 0.32
PDLIM7-210ENST00000503827 SLC22A12Q96S37 553 aa17.05■□□□□ 0.32
PDLIM7-210ENST00000503827 PI4K2AQ9BTU6 479 aa17.05■□□□□ 0.32
PDLIM7-210ENST00000503827 CAPN10Q9HC96 672 aa17.05■□□□□ 0.32
PDLIM7-210ENST00000503827 LAMA5O15230 3695 aa17.05■□□□□ 0.32
PDLIM7-210ENST00000503827 ANO9A1A5B4 782 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 MYMKA6NI61 221 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 H0YCG3 227 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 SGK1O00141 431 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 OGTO15294 1046 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 NOL4O94818 638 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 SYPP08247 313 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 FTH1P19P0C7X4 201 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 TCF3P15923 654 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 TIE1P35590 1138 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 TAF6P49848 677 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 LIG4P49917 911 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 TSPY1Q01534 308 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 SLC14A1Q13336 389 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 KCNB1Q14721 858 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 TMEM132DQ14C87 1099 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 NFE2Q16621 373 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 SDHAF4Q5VUM1 108 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 WSCD1Q658N2 575 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 SLC36A4Q6YBV0 504 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 ARL14EPQ8N8R7 260 aaPredicted RBP17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 FSIP1Q8NA03 581 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 IL17RCQ8NAC3 791 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 NSUN7Q8NE18 718 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 MDM1Q8TC05 714 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 MYRFLQ96LU7 910 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 DNAAF2Q9NVR5 837 aaKnown RBP17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 RAXQ9Y2V3 346 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 DERAQ9Y315 318 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 ACACAQ13085 2346 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 SHROOM3Q8TF72 1996 aa17.04■□□□□ 0.32
PDLIM7-210ENST00000503827 FLNBO75369 2602 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-210ENST00000503827 SH3BP5O60239 455 aa17.03■□□□□ 0.32
PDLIM7-210ENST00000503827 HDCP19113 662 aa17.03■□□□□ 0.32
PDLIM7-210ENST00000503827 RPL6Q02878 288 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-210ENST00000503827 RAD51AP2Q09MP3 1159 aa17.03■□□□□ 0.32
PDLIM7-210ENST00000503827 NBR1Q14596 966 aa17.03■□□□□ 0.32
PDLIM7-210ENST00000503827 DDR2Q16832 855 aa17.03■□□□□ 0.32
PDLIM7-210ENST00000503827 TTC38Q5R3I4 469 aa17.03■□□□□ 0.32
PDLIM7-210ENST00000503827 KRT79Q5XKE5 535 aa17.03■□□□□ 0.32
PDLIM7-210ENST00000503827 PNPLA1Q8N8W4 532 aa17.03■□□□□ 0.32
PDLIM7-210ENST00000503827 OR2I1PQ8NGU4 316 aa17.03■□□□□ 0.32
PDLIM7-210ENST00000503827 ADAM32Q8TC27 787 aa17.03■□□□□ 0.32
PDLIM7-210ENST00000503827 SPATA18Q8TC71 538 aa17.03■□□□□ 0.32
PDLIM7-210ENST00000503827 GTF3C6Q969F1 213 aa17.03■□□□□ 0.32
PDLIM7-210ENST00000503827 CAMK1GQ96NX5 476 aa17.03■□□□□ 0.32
PDLIM7-210ENST00000503827 TMLHEQ9NVH6 421 aa17.03■□□□□ 0.32
PDLIM7-210ENST00000503827 GCNT4Q9P109 453 aa17.03■□□□□ 0.32
PDLIM7-210ENST00000503827 APOBEC2Q9Y235 224 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-210ENST00000503827 MYO18AQ92614 2054 aaKnown RBP17.03■□□□□ 0.32
PDLIM7-210ENST00000503827 MYOFQ9NZM1 2061 aa17.02■□□□□ 0.32
PDLIM7-210ENST00000503827 TCRBV21S2A2A0A5A6 115 aa17.02■□□□□ 0.32
PDLIM7-210ENST00000503827 HNRNPDLO14979 420 aaKnown RBP17.02■□□□□ 0.32
PDLIM7-210ENST00000503827 FAM189A1O60320 539 aa17.02■□□□□ 0.32
PDLIM7-210ENST00000503827 APODP05090 189 aa17.02■□□□□ 0.32
PDLIM7-210ENST00000503827 NFICP08651 508 aa17.02■□□□□ 0.32
PDLIM7-210ENST00000503827 PDE6CP51160 858 aa17.02■□□□□ 0.32
PDLIM7-210ENST00000503827 GUCY1B3Q02153 619 aa17.02■□□□□ 0.32
PDLIM7-210ENST00000503827 ZNF33AQ06730 810 aa17.02■□□□□ 0.32
PDLIM7-210ENST00000503827 C19orf57Q0VDD7 668 aa17.02■□□□□ 0.32
PDLIM7-210ENST00000503827 ZC2HC1CQ53FD0 456 aaPredicted RBP17.02■□□□□ 0.32
PDLIM7-210ENST00000503827 DEFB119Q8N690 84 aa17.02■□□□□ 0.32
PDLIM7-210ENST00000503827 IGSF22Q8N9C0 903 aa17.02■□□□□ 0.32
PDLIM7-210ENST00000503827 PNKPQ96T60 521 aa17.02■□□□□ 0.32
PDLIM7-210ENST00000503827 CCSER1Q9C0I3 900 aa17.02■□□□□ 0.32
PDLIM7-210ENST00000503827 ARHGAP26Q9UNA1 814 aa17.02■□□□□ 0.32
PDLIM7-210ENST00000503827 SMG1Q96Q15 3661 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-210ENST00000503827 C2orf78A6NCI8 922 aa17.01■□□□□ 0.31
PDLIM7-210ENST00000503827 JAK2O60674 1132 aa17.01■□□□□ 0.31
PDLIM7-210ENST00000503827 KAT7O95251 611 aa17.01■□□□□ 0.31
PDLIM7-210ENST00000503827 GAB4Q2WGN9 574 aa17.01■□□□□ 0.31
PDLIM7-210ENST00000503827 SV2CQ496J9 727 aa17.01■□□□□ 0.31
PDLIM7-210ENST00000503827 NAXDQ8IW45 347 aa17.01■□□□□ 0.31
PDLIM7-210ENST00000503827 C4orf32Q8N8J7 132 aa17.01■□□□□ 0.31
PDLIM7-210ENST00000503827 LEO1Q8WVC0 666 aaPredicted RBP17.01■□□□□ 0.31
PDLIM7-210ENST00000503827 MSTO1Q9BUK6 570 aa17.01■□□□□ 0.31
PDLIM7-210ENST00000503827 ABCB6Q9NP58 842 aa17.01■□□□□ 0.31
PDLIM7-210ENST00000503827 ASH1LQ9NR48 2969 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-210ENST00000503827 CACNA2D2Q9NY47 1150 aa17.01■□□□□ 0.31
PDLIM7-210ENST00000503827 LARSQ9P2J5 1176 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-210ENST00000503827 CPSF3Q9UKF6 684 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-210ENST00000503827 HELZ2Q9BYK8 2649 aaKnown RBP17■□□□□ 0.31
PDLIM7-210ENST00000503827 KPNA7A9QM74 516 aa17■□□□□ 0.31
PDLIM7-210ENST00000503827 CYP17A1P05093 508 aa17■□□□□ 0.31
PDLIM7-210ENST00000503827 CYP2F1P24903 491 aa17■□□□□ 0.31
PDLIM7-210ENST00000503827 CDC25AP30304 524 aa17■□□□□ 0.31
PDLIM7-210ENST00000503827 EIF2DP41214 584 aaKnown RBP17■□□□□ 0.31
PDLIM7-210ENST00000503827 SLC6A11P48066 632 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms