RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 IER2Q9BTL4 223 aa20.77■□□□□ 0.92
UBE2D3-215ENST00000503418 KIF9Q9HAQ2 790 aa20.77■□□□□ 0.92
UBE2D3-215ENST00000503418 RBM12Q9NTZ6 932 aaKnown RBP20.77■□□□□ 0.92
UBE2D3-215ENST00000503418 TACC1O75410 805 aa20.76■□□□□ 0.91
UBE2D3-215ENST00000503418 ANXA13P27216 316 aa20.76■□□□□ 0.91
UBE2D3-215ENST00000503418 NDUFA8P51970 172 aa20.76■□□□□ 0.91
UBE2D3-215ENST00000503418 PPP2R5DQ14738 602 aa20.76■□□□□ 0.91
UBE2D3-215ENST00000503418 ITPRIPL2Q3MIP1 535 aa20.76■□□□□ 0.91
UBE2D3-215ENST00000503418 TRIM68Q6AZZ1 485 aa20.76■□□□□ 0.91
UBE2D3-215ENST00000503418 VSTM1Q6UX27 236 aa20.76■□□□□ 0.91
UBE2D3-215ENST00000503418 FSIP1Q8NA03 581 aa20.76■□□□□ 0.91
UBE2D3-215ENST00000503418 MYCBPAPQ8TBZ2 947 aa20.76■□□□□ 0.91
UBE2D3-215ENST00000503418 SYAP1Q96A49 352 aaPredicted RBP20.76■□□□□ 0.91
UBE2D3-215ENST00000503418 NME7Q9Y5B8 376 aa20.76■□□□□ 0.91
UBE2D3-215ENST00000503418 ATP6V1DQ9Y5K8 247 aa20.76■□□□□ 0.91
UBE2D3-215ENST00000503418 LRRIQ3A6PVS8 624 aaPredicted RBP20.75■□□□□ 0.91
UBE2D3-215ENST00000503418 SOBPA7XYQ1 873 aa20.75■□□□□ 0.91
UBE2D3-215ENST00000503418 RPN1P04843 607 aaKnown RBP20.75■□□□□ 0.91
UBE2D3-215ENST00000503418 MYL1P05976 194 aa20.75■□□□□ 0.91
UBE2D3-215ENST00000503418 PRR29P0C7W0 189 aa20.75■□□□□ 0.91
UBE2D3-215ENST00000503418 ATICP31939 592 aa20.75■□□□□ 0.91
UBE2D3-215ENST00000503418 CCR3P51677 355 aa20.75■□□□□ 0.91
UBE2D3-215ENST00000503418 ZNF699Q32M78 642 aa20.75■□□□□ 0.91
UBE2D3-215ENST00000503418 TDRD10Q5VZ19 366 aaKnown RBP20.75■□□□□ 0.91
UBE2D3-215ENST00000503418 CC2D1AQ6P1N0 951 aaPredicted RBP20.75■□□□□ 0.91
UBE2D3-215ENST00000503418 RIN3Q8TB24 985 aa20.75■□□□□ 0.91
UBE2D3-215ENST00000503418 PARD3BQ8TEW8 1205 aa20.75■□□□□ 0.91
UBE2D3-215ENST00000503418 SPATA17Q96L03 361 aa20.75■□□□□ 0.91
UBE2D3-215ENST00000503418 XYLT2Q9H1B5 865 aa20.75■□□□□ 0.91
UBE2D3-215ENST00000503418 KCTD10Q9H3F6 313 aa20.75■□□□□ 0.91
UBE2D3-215ENST00000503418 DPEP3Q9H4B8 488 aa20.75■□□□□ 0.91
UBE2D3-215ENST00000503418 EBF3Q9H4W6 596 aa20.75■□□□□ 0.91
UBE2D3-215ENST00000503418 TRAV19A0A0A6YYK7 116 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 A8MXQ7 604 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 TRIM66O15016 1216 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 STAU1O95793 577 aaKnown RBP20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 NR3C1P04150 777 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 CKMP06732 381 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 USP17L7P0C7H9 530 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 PTPN1P18031 435 aaKnown RBP20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 SATB1Q01826 763 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 RUNX3Q13761 415 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 GAS6Q14393 721 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 WDR44Q5JSH3 913 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 DGKKQ5KSL6 1271 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 CEP135Q66GS9 1140 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 SCARA5Q6ZMJ2 495 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 DENND5BQ6ZUT9 1274 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 SUMF1Q8NBK3 374 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 ZBTB44Q8NCP5 570 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 CCDC47Q96A33 483 aaKnown RBP20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 SLC22A12Q96S37 553 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 CYP2S1Q96SQ9 504 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 FAM83CQ9BQN1 747 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 SCAND2PQ9GZW5 306 aaPredicted RBP20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 SMYD3Q9H7B4 428 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 HPS4Q9NQG7 708 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 DMAC2Q9NW81 257 aa20.74■□□□□ 0.91
UBE2D3-215ENST00000503418 HELZP42694 1942 aaKnown RBP20.73■□□□□ 0.91
UBE2D3-215ENST00000503418 C2orf78A6NCI8 922 aa20.73■□□□□ 0.91
UBE2D3-215ENST00000503418 PDXKO00764 312 aa20.73■□□□□ 0.91
UBE2D3-215ENST00000503418 FAM163BP0C2L3 166 aa20.73■□□□□ 0.91
UBE2D3-215ENST00000503418 CXCL12P48061 93 aa20.73■□□□□ 0.91
UBE2D3-215ENST00000503418 AP3M2P53677 418 aa20.73■□□□□ 0.91
UBE2D3-215ENST00000503418 NRLP54845 237 aa20.73■□□□□ 0.91
UBE2D3-215ENST00000503418 FAM160A1Q05DH4 1040 aa20.73■□□□□ 0.91
UBE2D3-215ENST00000503418 NCOA4Q13772 614 aa20.73■□□□□ 0.91
UBE2D3-215ENST00000503418 ZNF268Q14587 947 aaPredicted RBP20.73■□□□□ 0.91
UBE2D3-215ENST00000503418 KCNB1Q14721 858 aa20.73■□□□□ 0.91
UBE2D3-215ENST00000503418 Q6ZS52 159 aa20.73■□□□□ 0.91
UBE2D3-215ENST00000503418 SLC9A9Q8IVB4 645 aa20.73■□□□□ 0.91
UBE2D3-215ENST00000503418 SPEM1Q8N4L4 309 aa20.73■□□□□ 0.91
UBE2D3-215ENST00000503418 ARL14EPQ8N8R7 260 aaPredicted RBP20.73■□□□□ 0.91
UBE2D3-215ENST00000503418 B3GALNT2Q8NCR0 500 aa20.73■□□□□ 0.91
UBE2D3-215ENST00000503418 RUBCNQ92622 972 aa20.73■□□□□ 0.91
UBE2D3-215ENST00000503418 NELL1Q92832 810 aa20.73■□□□□ 0.91
UBE2D3-215ENST00000503418 ELMO3Q96BJ8 720 aa20.73■□□□□ 0.91
UBE2D3-215ENST00000503418 FAM126AQ9BYI3 521 aaPredicted RBP20.73■□□□□ 0.91
UBE2D3-215ENST00000503418 EP300Q09472 2414 aaPredicted RBP20.72■□□□□ 0.91
UBE2D3-215ENST00000503418 F8VP50 259 aa20.72■□□□□ 0.91
UBE2D3-215ENST00000503418 CALUO43852 315 aaPredicted RBP20.72■□□□□ 0.91
UBE2D3-215ENST00000503418 ARSAP15289 507 aa20.72■□□□□ 0.91
UBE2D3-215ENST00000503418 RAP1GAPP47736 663 aa20.72■□□□□ 0.91
UBE2D3-215ENST00000503418 CDH8P55286 799 aa20.72■□□□□ 0.91
UBE2D3-215ENST00000503418 USP46P62068 366 aa20.72■□□□□ 0.91
UBE2D3-215ENST00000503418 DLG4P78352 724 aa20.72■□□□□ 0.91
UBE2D3-215ENST00000503418 MTF1Q14872 753 aa20.72■□□□□ 0.91
UBE2D3-215ENST00000503418 ZNF667Q5HYK9 610 aa20.72■□□□□ 0.91
UBE2D3-215ENST00000503418 MAMSTRQ6ZN01 415 aa20.72■□□□□ 0.91
UBE2D3-215ENST00000503418 KIAA2013Q8IYS2 634 aa20.72■□□□□ 0.91
UBE2D3-215ENST00000503418 DCLK2Q8N568 766 aa20.72■□□□□ 0.91
UBE2D3-215ENST00000503418 CEP295NLQ96MC4 621 aa20.72■□□□□ 0.91
UBE2D3-215ENST00000503418 GOLPH3LQ9H4A5 285 aa20.72■□□□□ 0.91
UBE2D3-215ENST00000503418 GDPD2Q9HCC8 539 aa20.72■□□□□ 0.91
UBE2D3-215ENST00000503418 FRMD4BQ9Y2L6 1034 aa20.72■□□□□ 0.91
UBE2D3-215ENST00000503418 GVINP1Q7Z2Y8 2422 aa20.72■□□□□ 0.91
UBE2D3-215ENST00000503418 FAM237AA0A1B0GTK4 181 aa20.71■□□□□ 0.91
UBE2D3-215ENST00000503418 A0A1W2PQ27 194 aa20.71■□□□□ 0.91
UBE2D3-215ENST00000503418 A0A1W2PQ64 194 aa20.71■□□□□ 0.91
UBE2D3-215ENST00000503418 A0A1W2PQD8 194 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms