RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 CRTC3Q6UUV7 619 aa4□□□□□ -1.77
SUB1-202ENST00000502453 RSPO2Q6UXX9 243 aaPredicted RBP4□□□□□ -1.77
SUB1-202ENST00000502453 ILDR2Q71H61 639 aa4□□□□□ -1.77
SUB1-202ENST00000502453 RUFY3Q7L099 469 aa4□□□□□ -1.77
SUB1-202ENST00000502453 FAM35AQ86V20 835 aa4□□□□□ -1.77
SUB1-202ENST00000502453 PANK1Q8TE04 598 aa4□□□□□ -1.77
SUB1-202ENST00000502453 SCFD2Q8WU76 684 aa4□□□□□ -1.77
SUB1-202ENST00000502453 FATE1Q969F0 183 aa4□□□□□ -1.77
SUB1-202ENST00000502453 VPS50Q96JG6 964 aa4□□□□□ -1.77
SUB1-202ENST00000502453 RNPEPQ9H4A4 650 aa4□□□□□ -1.77
SUB1-202ENST00000502453 CD93Q9NPY3 652 aa4□□□□□ -1.77
SUB1-202ENST00000502453 FPGT-TNNI3KV9GXZ4 949 aa4□□□□□ -1.77
SUB1-202ENST00000502453 ZNF804BA4D1E1 1349 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 SMARCA4P51532 1647 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 RNF113AO15541 343 aaKnown RBP3.99□□□□□ -1.77
SUB1-202ENST00000502453 SLC25A17O43808 307 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 RTN2O75298 545 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 METTL18O95568 372 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 LRG1P02750 347 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 UBL4AP11441 157 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 LAG3P18627 525 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 ZNF41P51814 821 aaPredicted RBP3.99□□□□□ -1.77
SUB1-202ENST00000502453 HERVK_113P62684 666 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 ERVK-24P63145 666 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 SNX1Q13596 522 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 C2orf76Q3KRA6 126 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 KBTBD12Q3ZCT8 623 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 USP39Q53GS9 565 aaKnown RBP3.99□□□□□ -1.77
SUB1-202ENST00000502453 ZBTB41Q5SVQ8 909 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 ZNF574Q6ZN55 896 aaPredicted RBP3.99□□□□□ -1.77
SUB1-202ENST00000502453 ZFAND2BQ8WV99 257 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 KCNE4Q8WWG9 221 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 CTAGE1Q96RT6 745 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 SERHLQ9NQF3 203 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 KRT82Q9NSB4 513 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 DKK3Q9UBP4 350 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 SRRDQ9UH36 339 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 SF3B6Q9Y3B4 125 aaKnown RBP3.99□□□□□ -1.77
SUB1-202ENST00000502453 ST20-MTHFSA0A0A6YYL1 179 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 BUB1BO60566 1050 aaPredicted RBP3.99□□□□□ -1.77
SUB1-202ENST00000502453 EXOC3O60645 756 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 ANXA1P04083 346 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 CPT2P23786 658 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 KCNJ5P48544 419 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 GPC3P51654 580 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 GTF2A1P52655 376 aaPredicted RBP3.99□□□□□ -1.77
SUB1-202ENST00000502453 CCNA1P78396 465 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 MRPS9P82933 396 aaKnown RBP3.99□□□□□ -1.77
SUB1-202ENST00000502453 POU4F1Q01851 419 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 SCAPQ12770 1279 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 EFHC2Q5JST6 749 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 CWF19L1Q69YN2 538 aaKnown RBP3.99□□□□□ -1.77
SUB1-202ENST00000502453 ESPNLQ6ZVH7 1005 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 INTS8Q75QN2 995 aaKnown RBP3.99□□□□□ -1.77
SUB1-202ENST00000502453 OTOAQ7RTW8 1153 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 PLPPR4Q7Z2D5 763 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 UBE3DQ7Z6J8 389 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 SYCP3Q8IZU3 236 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 NPLOC4Q8TAT6 608 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 SYTL5Q8TDW5 730 aaPredicted RBP3.99□□□□□ -1.77
SUB1-202ENST00000502453 PRCCQ92733 491 aaPredicted RBP3.99□□□□□ -1.77
SUB1-202ENST00000502453 CEP295NLQ96MC4 621 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 METTL22Q9BUU2 404 aaPredicted RBP3.99□□□□□ -1.77
SUB1-202ENST00000502453 CARD11Q9BXL7 1154 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 UBE2OQ9C0C9 1292 aaKnown RBP3.99□□□□□ -1.77
SUB1-202ENST00000502453 RAD18Q9NS91 495 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 HCFC1R1Q9NWW0 138 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 TBC1D14Q9P2M4 693 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 ZNF212Q9UDV6 495 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 ADGRE2Q9UHX3 823 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 AGO2Q9UKV8 859 aaKnown RBP3.99□□□□□ -1.77
SUB1-202ENST00000502453 USP18Q9UMW8 372 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 DNAJC16Q9Y2G8 782 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 TBC1D30Q9Y2I9 924 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 RASSF9O75901 435 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 CLEC3BP05452 202 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 KRT17Q04695 432 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 EPS8Q12929 822 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 SLC13A2Q13183 592 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 CUL2Q13617 745 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 NEDD9Q14511 834 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 KHDC1Q4VXA5 237 aaKnown RBP3.99□□□□□ -1.77
SUB1-202ENST00000502453 THEMIS2Q5TEJ8 643 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 TMEM154Q6P9G4 183 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 UBE3BQ7Z3V4 1068 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 MRPL41Q8IXM3 137 aaKnown RBP3.99□□□□□ -1.77
SUB1-202ENST00000502453 SP8Q8IXZ3 490 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 ADSSL1Q8N142 457 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 AFAP1Q8N556 730 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 ARRDC4Q8NCT1 418 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 CCDC148Q8NFR7 591 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 TNIP2Q8NFZ5 429 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 RAX2Q96IS3 184 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 REEP2Q9BRK0 252 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 MYL10Q9BUA6 226 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 ABCG8Q9H221 673 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 TMEM165Q9HC07 324 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 NOD2Q9HC29 1040 aa3.99□□□□□ -1.77
SUB1-202ENST00000502453 SSU72Q9NP77 194 aaKnown RBP3.99□□□□□ -1.77
SUB1-202ENST00000502453 PNPOQ9NVS9 261 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms