RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 LRRC3Q9BY71 257 aa17.81■□□□□ 0.44
PRKCB-210ENST00000498739 VPS16Q9H269 839 aa17.81■□□□□ 0.44
PRKCB-210ENST00000498739 CDH7Q9ULB5 785 aa17.81■□□□□ 0.44
PRKCB-210ENST00000498739 A0A1W2PRU2 124 aa17.8■□□□□ 0.44
PRKCB-210ENST00000498739 SMTNL1A8MU46 457 aa17.8■□□□□ 0.44
PRKCB-210ENST00000498739 NRG2O14511 850 aaPredicted RBP17.8■□□□□ 0.44
PRKCB-210ENST00000498739 AP1G2O75843 785 aa17.8■□□□□ 0.44
PRKCB-210ENST00000498739 LAMP2P13473 410 aa17.8■□□□□ 0.44
PRKCB-210ENST00000498739 CDK11BP21127 795 aaKnown RBP17.8■□□□□ 0.44
PRKCB-210ENST00000498739 GABRR2P28476 465 aa17.8■□□□□ 0.44
PRKCB-210ENST00000498739 RAD23BP54727 409 aa17.8■□□□□ 0.44
PRKCB-210ENST00000498739 GCNT1Q02742 428 aa17.8■□□□□ 0.44
PRKCB-210ENST00000498739 PAQR9Q6ZVX9 377 aa17.8■□□□□ 0.44
PRKCB-210ENST00000498739 RNF135Q8IUD6 432 aa17.8■□□□□ 0.44
PRKCB-210ENST00000498739 NPAS3Q8IXF0 933 aa17.8■□□□□ 0.44
PRKCB-210ENST00000498739 UBR7Q8N806 425 aa17.8■□□□□ 0.44
PRKCB-210ENST00000498739 SLC4A11Q8NBS3 891 aa17.8■□□□□ 0.44
PRKCB-210ENST00000498739 MCRS1Q96EZ8 462 aa17.8■□□□□ 0.44
PRKCB-210ENST00000498739 CYFIP2Q96F07 1278 aa17.8■□□□□ 0.44
PRKCB-210ENST00000498739 SMARCD1Q96GM5 515 aa17.8■□□□□ 0.44
PRKCB-210ENST00000498739 UBE2TQ9NPD8 197 aaPredicted RBP17.8■□□□□ 0.44
PRKCB-210ENST00000498739 KRT82Q9NSB4 513 aa17.8■□□□□ 0.44
PRKCB-210ENST00000498739 PCDHB4Q9Y5E5 795 aa17.8■□□□□ 0.44
PRKCB-210ENST00000498739 TNFRSF10AO00220 468 aa17.79■□□□□ 0.44
PRKCB-210ENST00000498739 MOSPD3O75425 235 aa17.79■□□□□ 0.44
PRKCB-210ENST00000498739 NOL4O94818 638 aa17.79■□□□□ 0.44
PRKCB-210ENST00000498739 FGF19O95750 216 aa17.79■□□□□ 0.44
PRKCB-210ENST00000498739 HMGA1P17096 107 aaKnown RBP17.79■□□□□ 0.44
PRKCB-210ENST00000498739 PON1P27169 355 aa17.79■□□□□ 0.44
PRKCB-210ENST00000498739 APBA1Q02410 837 aa17.79■□□□□ 0.44
PRKCB-210ENST00000498739 TEAD2Q15562 447 aa17.79■□□□□ 0.44
PRKCB-210ENST00000498739 GJB7Q6PEY0 223 aa17.79■□□□□ 0.44
PRKCB-210ENST00000498739 TMEM270Q6UE05 265 aa17.79■□□□□ 0.44
PRKCB-210ENST00000498739 DHX40Q8IX18 779 aaKnown RBP17.79■□□□□ 0.44
PRKCB-210ENST00000498739 SHKBP1Q8TBC3 707 aa17.79■□□□□ 0.44
PRKCB-210ENST00000498739 SPATA17Q96L03 361 aa17.79■□□□□ 0.44
PRKCB-210ENST00000498739 C8orf48Q96LL4 319 aa17.79■□□□□ 0.44
PRKCB-210ENST00000498739 GCNAQ96QF7 691 aa17.79■□□□□ 0.44
PRKCB-210ENST00000498739 HNRNPABQ99729 332 aaKnown RBP17.79■□□□□ 0.44
PRKCB-210ENST00000498739 ATXN3LQ9H3M9 355 aa17.79■□□□□ 0.44
PRKCB-210ENST00000498739 DMAP1Q9NPF5 467 aaPredicted RBP17.79■□□□□ 0.44
PRKCB-210ENST00000498739 TMEM30AQ9NV96 361 aa17.79■□□□□ 0.44
PRKCB-210ENST00000498739 EPS15L1Q9UBC2 864 aa17.79■□□□□ 0.44
PRKCB-210ENST00000498739 APEX2Q9UBZ4 518 aa17.79■□□□□ 0.44
PRKCB-210ENST00000498739 LIMD1Q9UGP4 676 aa17.79■□□□□ 0.44
PRKCB-210ENST00000498739 ZFP37Q9Y6Q3 630 aaPredicted RBP17.79■□□□□ 0.44
PRKCB-210ENST00000498739 BECN2A8MW95 431 aa17.78■□□□□ 0.44
PRKCB-210ENST00000498739 MICAL2O94851 1124 aa17.78■□□□□ 0.44
PRKCB-210ENST00000498739 FAM200BP0CF97 657 aa17.78■□□□□ 0.44
PRKCB-210ENST00000498739 CD19P15391 556 aa17.78■□□□□ 0.44
PRKCB-210ENST00000498739 ZNF18P17022 549 aa17.78■□□□□ 0.44
PRKCB-210ENST00000498739 ACO1P21399 889 aaKnown RBP17.78■□□□□ 0.44
PRKCB-210ENST00000498739 CDC25CP30307 473 aa17.78■□□□□ 0.44
PRKCB-210ENST00000498739 COPB1P53618 953 aaKnown RBP17.78■□□□□ 0.44
PRKCB-210ENST00000498739 MFAP3P55082 362 aa17.78■□□□□ 0.44
PRKCB-210ENST00000498739 PPP1R26Q5T8A7 1209 aaPredicted RBP17.78■□□□□ 0.44
PRKCB-210ENST00000498739 DENND5BQ6ZUT9 1274 aa17.78■□□□□ 0.44
PRKCB-210ENST00000498739 GAREM2Q75VX8 874 aa17.78■□□□□ 0.44
PRKCB-210ENST00000498739 ST13P5Q8NFI4 369 aaPredicted RBP17.78■□□□□ 0.44
PRKCB-210ENST00000498739 CEP295NLQ96MC4 621 aa17.78■□□□□ 0.44
PRKCB-210ENST00000498739 KREMEN1Q96MU8 473 aa17.78■□□□□ 0.44
PRKCB-210ENST00000498739 KCNK16Q96T55 309 aa17.78■□□□□ 0.44
PRKCB-210ENST00000498739 HSD3B7Q9H2F3 369 aa17.78■□□□□ 0.44
PRKCB-210ENST00000498739 SLITRK6Q9H5Y7 841 aa17.78■□□□□ 0.44
PRKCB-210ENST00000498739 IL21Q9HBE4 155 aa17.78■□□□□ 0.44
PRKCB-210ENST00000498739 LIMA1Q9UHB6 759 aaKnown RBP17.78■□□□□ 0.44
PRKCB-210ENST00000498739 DLL1O00548 723 aa17.77■□□□□ 0.44
PRKCB-210ENST00000498739 ASGR2P07307 311 aa17.77■□□□□ 0.44
PRKCB-210ENST00000498739 MAP3K7CLP57077 242 aa17.77■□□□□ 0.44
PRKCB-210ENST00000498739 CYP4F8P98187 520 aa17.77■□□□□ 0.44
PRKCB-210ENST00000498739 IFRD2Q12894 506 aaPredicted RBP17.77■□□□□ 0.44
PRKCB-210ENST00000498739 ARHGAP15Q53QZ3 475 aa17.77■□□□□ 0.44
PRKCB-210ENST00000498739 FKBP15Q5T1M5 1219 aa17.77■□□□□ 0.44
PRKCB-210ENST00000498739 ENOSF1Q7L5Y1 443 aa17.77■□□□□ 0.44
PRKCB-210ENST00000498739 RBBP8NLQ8NC74 664 aaPredicted RBP17.77■□□□□ 0.44
PRKCB-210ENST00000498739 TRMT2BQ96GJ1 504 aaKnown RBP17.77■□□□□ 0.44
PRKCB-210ENST00000498739 FAM81BQ96LP2 452 aa17.77■□□□□ 0.44
PRKCB-210ENST00000498739 SMOQ99835 787 aa17.77■□□□□ 0.44
PRKCB-210ENST00000498739 SIX2Q9NPC8 291 aa17.77■□□□□ 0.44
PRKCB-210ENST00000498739 GDE1Q9NZC3 331 aa17.77■□□□□ 0.44
PRKCB-210ENST00000498739 UXTQ9UBK9 157 aaPredicted RBP17.77■□□□□ 0.44
PRKCB-210ENST00000498739 MUTYHQ9UIF7 546 aa17.77■□□□□ 0.44
PRKCB-210ENST00000498739 PTPRDP23468 1912 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 NOTCH4Q99466 2003 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 BEST1O76090 585 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 F11P03951 625 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 ATP1A3P13637 1013 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 KRT5P13647 590 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 USP46P62068 366 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 KCNMA1Q12791 1236 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 IQCB1Q15051 598 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 ARHGAP44Q17R89 818 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 SGO2Q562F6 1265 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 STXBP5Q5T5C0 1151 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 ARHGAP17Q68EM7 881 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 POTEHQ6S545 545 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 CLEC20AQ6ZU45 233 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 ZMIZ2Q8NF64 920 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 KHSRPQ92945 711 aaKnown RBP eCLIP17.76■□□□□ 0.432e-6■□□□□ 10.2
PRKCB-210ENST00000498739 JAKMIP2Q96AA8 810 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms