RNA–Protein interactions for RNA: ENST00000498579.5

ECM1-207, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 943 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-207ENST00000498579 NXF1Q9UBU9 619 aaKnown RBP20.07■□□□□ 0.8
ECM1-207ENST00000498579 USP34Q70CQ2 3546 aa20.07■□□□□ 0.8
ECM1-207ENST00000498579 ATP8B3O60423 1300 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 TRAV19A0A0A6YYK7 116 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 LRRIQ3A6PVS8 624 aaPredicted RBP20.06■□□□□ 0.8
ECM1-207ENST00000498579 A8MXQ7 604 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 SPECC1L-ADORA2AF8WAN1 911 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 IKBKBO14920 756 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 ATP2C2O75185 946 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 BDNFP23560 247 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 RPL13P26373 211 aaKnown RBP20.06■□□□□ 0.8
ECM1-207ENST00000498579 CTHP32929 405 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 PPP3CCP48454 512 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 CASP4P49662 377 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 NUCB2P80303 420 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 CSTF1Q05048 431 aaKnown RBP20.06■□□□□ 0.8
ECM1-207ENST00000498579 FAM160A1Q05DH4 1040 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 DPYDQ12882 1025 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 NCOA4Q13772 614 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 NFIL3Q16649 462 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 ITPRIPL2Q3MIP1 535 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 MDH1BQ5I0G3 518 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 DGKKQ5KSL6 1271 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 TDRD10Q5VZ19 366 aaKnown RBP20.06■□□□□ 0.8
ECM1-207ENST00000498579 CEP135Q66GS9 1140 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 DENND5BQ6ZUT9 1274 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 GPIHBP1Q8IV16 184 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 ATRIPQ8WXE1 791 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 USP13Q92995 863 aaPredicted RBP20.06■□□□□ 0.8
ECM1-207ENST00000498579 EXOC4Q96A65 974 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 LRRC3BQ96PB8 259 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 ZSCAN32Q9NX65 697 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 R4GN57 208 aa20.06■□□□□ 0.8
ECM1-207ENST00000498579 GOLGA6L4A6NEF3 574 aa20.05■□□□□ 0.8
ECM1-207ENST00000498579 ZNF202O95125 648 aa20.05■□□□□ 0.8
ECM1-207ENST00000498579 C4BPAP04003 597 aaKnown RBP20.05■□□□□ 0.8
ECM1-207ENST00000498579 USP17L7P0C7H9 530 aa20.05■□□□□ 0.8
ECM1-207ENST00000498579 CHRNB1P11230 501 aa20.05■□□□□ 0.8
ECM1-207ENST00000498579 PTPN1P18031 435 aaKnown RBP20.05■□□□□ 0.8
ECM1-207ENST00000498579 TRIM21P19474 475 aaKnown RBP20.05■□□□□ 0.8
ECM1-207ENST00000498579 NRLP54845 237 aa20.05■□□□□ 0.8
ECM1-207ENST00000498579 ENPEPQ07075 957 aa20.05■□□□□ 0.8
ECM1-207ENST00000498579 MTAPQ13126 283 aa20.05■□□□□ 0.8
ECM1-207ENST00000498579 CCDC142Q17RM4 750 aa20.05■□□□□ 0.8
ECM1-207ENST00000498579 SGSM1Q2NKQ1 1148 aa20.05■□□□□ 0.8
ECM1-207ENST00000498579 ADSSL1Q8N142 457 aa20.05■□□□□ 0.8
ECM1-207ENST00000498579 SYNPOQ8N3V7 929 aa20.05■□□□□ 0.8
ECM1-207ENST00000498579 B3GALNT2Q8NCR0 500 aa20.05■□□□□ 0.8
ECM1-207ENST00000498579 TAF4BQ92750 862 aa20.05■□□□□ 0.8
ECM1-207ENST00000498579 CHAMP1Q96JM3 812 aa20.05■□□□□ 0.8
ECM1-207ENST00000498579 ZFYVE19Q96K21 471 aa20.05■□□□□ 0.8
ECM1-207ENST00000498579 TNIP3Q96KP6 325 aa20.05■□□□□ 0.8
ECM1-207ENST00000498579 C8orf48Q96LL4 319 aa20.05■□□□□ 0.8
ECM1-207ENST00000498579 SMG9Q9H0W8 520 aaKnown RBP20.05■□□□□ 0.8
ECM1-207ENST00000498579 GTSE1Q9NYZ3 720 aa20.05■□□□□ 0.8
ECM1-207ENST00000498579 TADA3O75528 432 aa20.04■□□□□ 0.8
ECM1-207ENST00000498579 CKMP06732 381 aa20.04■□□□□ 0.8
ECM1-207ENST00000498579 NOP14P78316 857 aaKnown RBP20.04■□□□□ 0.8
ECM1-207ENST00000498579 PDGFRLQ15198 375 aa20.04■□□□□ 0.8
ECM1-207ENST00000498579 ZACNQ401N2 412 aa20.04■□□□□ 0.8
ECM1-207ENST00000498579 INTS8Q75QN2 995 aaKnown RBP20.04■□□□□ 0.8
ECM1-207ENST00000498579 GUF1Q8N442 669 aaKnown RBP20.04■□□□□ 0.8
ECM1-207ENST00000498579 STKLD1Q8NE28 680 aa20.04■□□□□ 0.8
ECM1-207ENST00000498579 PLEKHO2Q8TD55 490 aa20.04■□□□□ 0.8
ECM1-207ENST00000498579 FAM83CQ9BQN1 747 aa20.04■□□□□ 0.8
ECM1-207ENST00000498579 TRPC7Q9HCX4 862 aa20.04■□□□□ 0.8
ECM1-207ENST00000498579 GKN1Q9NS71 199 aa20.04■□□□□ 0.8
ECM1-207ENST00000498579 TRPM5Q9NZQ8 1165 aa20.04■□□□□ 0.8
ECM1-207ENST00000498579 ZFHX2Q9C0A1 2572 aaPredicted RBP20.04■□□□□ 0.8
ECM1-207ENST00000498579 PRR29P0C7W0 189 aa20.03■□□□□ 0.8
ECM1-207ENST00000498579 KRT13P13646 458 aa20.03■□□□□ 0.8
ECM1-207ENST00000498579 NR2F2P24468 414 aa20.03■□□□□ 0.8
ECM1-207ENST00000498579 RUNX3Q13761 415 aa20.03■□□□□ 0.8
ECM1-207ENST00000498579 TTLL2Q9BWV7 592 aa20.03■□□□□ 0.8
ECM1-207ENST00000498579 IMPG2Q9BZV3 1241 aa20.03■□□□□ 0.8
ECM1-207ENST00000498579 GOLPH3LQ9H4A5 285 aa20.03■□□□□ 0.8
ECM1-207ENST00000498579 RMND1Q9NWS8 449 aa20.03■□□□□ 0.8
ECM1-207ENST00000498579 CCL26Q9Y258 94 aa20.03■□□□□ 0.8
ECM1-207ENST00000498579 TCHHQ07283 1943 aa20.03■□□□□ 0.8
ECM1-207ENST00000498579 DMDP11532 3685 aa20.02■□□□□ 0.8
ECM1-207ENST00000498579 F8VP50 259 aa20.02■□□□□ 0.8
ECM1-207ENST00000498579 SOX9P48436 509 aa20.02■□□□□ 0.8
ECM1-207ENST00000498579 VAMP7P51809 220 aa20.02■□□□□ 0.8
ECM1-207ENST00000498579 TNK2Q07912 1038 aa20.02■□□□□ 0.8
ECM1-207ENST00000498579 MTF1Q14872 753 aa20.02■□□□□ 0.8
ECM1-207ENST00000498579 SV2AQ7L0J3 742 aa20.02■□□□□ 0.8
ECM1-207ENST00000498579 SPEM1Q8N4L4 309 aa20.02■□□□□ 0.8
ECM1-207ENST00000498579 ZBTB44Q8NCP5 570 aa20.02■□□□□ 0.8
ECM1-207ENST00000498579 NELL1Q92832 810 aa20.02■□□□□ 0.8
ECM1-207ENST00000498579 SLITRK1Q96PX8 696 aa20.02■□□□□ 0.8
ECM1-207ENST00000498579 GTPBP4Q9BZE4 634 aaKnown RBP20.02■□□□□ 0.8
ECM1-207ENST00000498579 SMYD3Q9H7B4 428 aa20.02■□□□□ 0.8
ECM1-207ENST00000498579 GDPD2Q9HCC8 539 aa20.02■□□□□ 0.8
ECM1-207ENST00000498579 COL4A3Q01955 1670 aa20.01■□□□□ 0.79
ECM1-207ENST00000498579 F5P12259 2224 aa20.01■□□□□ 0.79
ECM1-207ENST00000498579 TCF3P15923 654 aa20.01■□□□□ 0.79
ECM1-207ENST00000498579 HDCP19113 662 aa20.01■□□□□ 0.79
ECM1-207ENST00000498579 CXCL12P48061 93 aa20.01■□□□□ 0.79
ECM1-207ENST00000498579 GRSF1Q12849 480 aaKnown RBP eCLIP20.01■□□□□ 0.79
ECM1-207ENST00000498579 USP4Q13107 963 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms