RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 GTF3C4Q9UKN8 822 aa14.97□□□□□ -0.01
CCDC58-207ENST00000498466 L1RE1Q9UN81 338 aa14.97□□□□□ -0.01
CCDC58-207ENST00000498466 ANK1P16157 1881 aa14.97□□□□□ -0.01
CCDC58-207ENST00000498466 IGF2RP11717 2491 aa14.97□□□□□ -0.01
CCDC58-207ENST00000498466 FREM2Q5SZK8 3169 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 ANTXRLA6NF34 631 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 MAP3K13O43283 966 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 HUS1O60921 280 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 IL18RAPO95256 599 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 HDCP19113 662 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 POLR2BP30876 1174 aaKnown RBP14.96□□□□□ -0.01
CCDC58-207ENST00000498466 SCN1AP35498 2009 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 OPRD1P41143 372 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 UBA7P41226 1012 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 TFAMQ00059 246 aaKnown RBP14.96□□□□□ -0.01
CCDC58-207ENST00000498466 POU5F1Q01860 360 aaKnown RBP14.96□□□□□ -0.01
CCDC58-207ENST00000498466 RING1Q06587 406 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 LRSAM1Q6UWE0 723 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 NT5DC4Q86YG4 428 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 SPATA2LQ8IUW3 424 aaPredicted RBP14.96□□□□□ -0.01
CCDC58-207ENST00000498466 SCN4BQ8IWT1 228 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 RLN3Q8WXF3 142 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 POMGNT1Q8WZA1 660 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 SPACA7Q96KW9 195 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 FIZ1Q96SL8 496 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 GCNT4Q9P109 453 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 ARHGAP26Q9UNA1 814 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 LHX6Q9UPM6 363 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 AGAP1Q9UPQ3 857 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 NEUROG3Q9Y4Z2 214 aa14.96□□□□□ -0.01
CCDC58-207ENST00000498466 ZNF638Q14966 1978 aaKnown RBP14.95□□□□□ -0.02
CCDC58-207ENST00000498466 NBEAQ8NFP9 2946 aa14.95□□□□□ -0.02
CCDC58-207ENST00000498466 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.95□□□□□ -0.02
CCDC58-207ENST00000498466 EIF5BO60841 1220 aaKnown RBP14.95□□□□□ -0.02
CCDC58-207ENST00000498466 ITGB3P05106 788 aa14.95□□□□□ -0.02
CCDC58-207ENST00000498466 ENGP17813 658 aa14.95□□□□□ -0.02
CCDC58-207ENST00000498466 PDE6CP51160 858 aa14.95□□□□□ -0.02
CCDC58-207ENST00000498466 MRPS21P82921 87 aaKnown RBP14.95□□□□□ -0.02
CCDC58-207ENST00000498466 MCM6Q14566 821 aa14.95□□□□□ -0.02
CCDC58-207ENST00000498466 CCDC142Q17RM4 750 aa14.95□□□□□ -0.02
CCDC58-207ENST00000498466 ARL6IP4Q66PJ3 421 aaKnown RBP14.95□□□□□ -0.02
CCDC58-207ENST00000498466 LMBRD2Q68DH5 695 aaPredicted RBP14.95□□□□□ -0.02
CCDC58-207ENST00000498466 CRELD2Q6UXH1 353 aaPredicted RBP14.95□□□□□ -0.02
CCDC58-207ENST00000498466 TMEM92Q6UXU6 159 aa14.95□□□□□ -0.02
CCDC58-207ENST00000498466 TMEFF1Q8IYR6 380 aa14.95□□□□□ -0.02
CCDC58-207ENST00000498466 TMEM86AQ8N2M4 240 aa14.95□□□□□ -0.02
CCDC58-207ENST00000498466 RASSF8Q8NHQ8 419 aa14.95□□□□□ -0.02
CCDC58-207ENST00000498466 OLIG1Q8TAK6 271 aa14.95□□□□□ -0.02
CCDC58-207ENST00000498466 WHAMMQ8TF30 809 aa14.95□□□□□ -0.02
CCDC58-207ENST00000498466 LRRC15Q8TF66 581 aa14.95□□□□□ -0.02
CCDC58-207ENST00000498466 AK8Q96MA6 479 aa14.95□□□□□ -0.02
CCDC58-207ENST00000498466 IKZF4Q9H2S9 585 aa14.95□□□□□ -0.02
CCDC58-207ENST00000498466 BCCIPQ9P287 314 aaKnown RBP eCLIP14.95□□□□□ -0.02
CCDC58-207ENST00000498466 STYXL1Q9Y6J8 313 aa14.95□□□□□ -0.02
CCDC58-207ENST00000498466 OBSL1O75147 1896 aa14.95□□□□□ -0.02
CCDC58-207ENST00000498466 LAMA5O15230 3695 aa14.95□□□□□ -0.02
CCDC58-207ENST00000498466 DENND4CQ5VZ89 1909 aa14.94□□□□□ -0.02
CCDC58-207ENST00000498466 ZFYVE26Q68DK2 2539 aa14.94□□□□□ -0.02
CCDC58-207ENST00000498466 SPAARA0A1B0GVQ0 90 aa14.94□□□□□ -0.02
CCDC58-207ENST00000498466 MYMKA6NI61 221 aa14.94□□□□□ -0.02
CCDC58-207ENST00000498466 TNFRSF10BO14763 440 aa14.94□□□□□ -0.02
CCDC58-207ENST00000498466 SLC26A4O43511 780 aa14.94□□□□□ -0.02
CCDC58-207ENST00000498466 TCF3P15923 654 aa14.94□□□□□ -0.02
CCDC58-207ENST00000498466 P2RY2P41231 377 aa14.94□□□□□ -0.02
CCDC58-207ENST00000498466 PTGER3P43115 390 aa14.94□□□□□ -0.02
CCDC58-207ENST00000498466 ATXN3P54252 364 aaPredicted RBP14.94□□□□□ -0.02
CCDC58-207ENST00000498466 SIM1P81133 766 aaPredicted RBP14.94□□□□□ -0.02
CCDC58-207ENST00000498466 CFAP221Q4G0U5 840 aa14.94□□□□□ -0.02
CCDC58-207ENST00000498466 SYT12Q8IV01 421 aa14.94□□□□□ -0.02
CCDC58-207ENST00000498466 ALLCQ8N6M5 410 aa14.94□□□□□ -0.02
CCDC58-207ENST00000498466 TXNDC5Q8NBS9 432 aaKnown RBP14.94□□□□□ -0.02
CCDC58-207ENST00000498466 RAD54LQ92698 747 aa14.94□□□□□ -0.02
CCDC58-207ENST00000498466 FUBP3Q96I24 572 aaKnown RBP eCLIP14.94□□□□□ -0.02
CCDC58-207ENST00000498466 FNBP1Q96RU3 617 aa14.94□□□□□ -0.02
CCDC58-207ENST00000498466 PKMYT1Q99640 499 aa14.94□□□□□ -0.02
CCDC58-207ENST00000498466 FAM213AQ9BRX8 229 aa14.94□□□□□ -0.02
CCDC58-207ENST00000498466 POLMQ9NP87 494 aaPredicted RBP14.94□□□□□ -0.02
CCDC58-207ENST00000498466 BLOC1S4Q9NUP1 217 aa14.94□□□□□ -0.02
CCDC58-207ENST00000498466 TMEM74BQ9NUR3 256 aa14.94□□□□□ -0.02
CCDC58-207ENST00000498466 KLK13Q9UKR3 277 aa14.94□□□□□ -0.02
CCDC58-207ENST00000498466 MSRB2Q9Y3D2 182 aa14.94□□□□□ -0.02
CCDC58-207ENST00000498466 SNX9Q9Y5X1 595 aa14.94□□□□□ -0.02
CCDC58-207ENST00000498466 ATXN2Q99700 1313 aaKnown RBP14.93□□□□□ -0.02
CCDC58-207ENST00000498466 DSPP15924 2871 aaKnown RBP14.93□□□□□ -0.02
CCDC58-207ENST00000498466 LEFTY2O00292 366 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 HCRTO43612 131 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 KLF8O95600 359 aaPredicted RBP14.93□□□□□ -0.02
CCDC58-207ENST00000498466 KRT19P08727 400 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 HNRNPLP14866 589 aaKnown RBP eCLIP14.93□□□□□ -0.029e-7■□□□□ 10.2
CCDC58-207ENST00000498466 PLCG1P19174 1290 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 PCSK1P29120 753 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 RDXP35241 583 aaKnown RBP14.93□□□□□ -0.02
CCDC58-207ENST00000498466 TIE1P35590 1138 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 LHX1P48742 406 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 ZXDBP98169 803 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 POSTNQ15063 836 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 GAB4Q2WGN9 574 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 LYSMD4Q5XG99 296 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 FILIP1Q7Z7B0 1213 aa14.93□□□□□ -0.02
CCDC58-207ENST00000498466 OSTM1Q86WC4 334 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms