RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 SMARCD1Q96GM5 515 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 RHOBTB2Q9BYZ6 727 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 GPR88Q9GZN0 384 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 SEPT11Q9NVA2 429 aaKnown RBP12.14□□□□□ -0.47
CTTN-208ENST00000498223 ZNHIT6Q9NWK9 470 aaKnown RBP12.14□□□□□ -0.47
CTTN-208ENST00000498223 MYO6Q9UM54 1294 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 CNTN6Q9UQ52 1028 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 HCFC2Q9Y5Z7 792 aa12.14□□□□□ -0.47
CTTN-208ENST00000498223 AKR1B15C9JRZ8 316 aaPredicted RBP12.13□□□□□ -0.47
CTTN-208ENST00000498223 M0QYV0 167 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 SOAT2O75908 522 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 SEC24AO95486 1093 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 LRG1P02750 347 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 C8AP07357 584 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 FAM200BP0CF97 657 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 CYP11B1P15538 503 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 CDC25BP30305 580 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 TUFMP49411 452 aaKnown RBP12.13□□□□□ -0.47
CTTN-208ENST00000498223 ZNF132P52740 706 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 EPHB3P54753 998 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 ADKP55263 362 aaKnown RBP12.13□□□□□ -0.47
CTTN-208ENST00000498223 RPL10AP62906 217 aaKnown RBP12.13□□□□□ -0.47
CTTN-208ENST00000498223 GOLGA8FQ08AF8 430 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 GOLGA8DPQ0D2H9 430 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 TDRD12Q587J7 1177 aaKnown RBP12.13□□□□□ -0.47
CTTN-208ENST00000498223 LILRA6Q6PI73 481 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.13□□□□□ -0.47
CTTN-208ENST00000498223 SLC47A2Q86VL8 602 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 CNGA4Q8IV77 575 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 FUKQ8N0W3 1084 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 ELMOD1Q8N336 334 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 TTC9BQ8N6N2 239 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 UBA3Q8TBC4 463 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 SLC22A17Q8WUG5 538 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 ZNF606Q8WXB4 792 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 TFAP2BQ92481 460 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 BAP1Q92560 729 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 FUBP3Q96I24 572 aaKnown RBP eCLIP12.13□□□□□ -0.47
CTTN-208ENST00000498223 PKMYT1Q99640 499 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 HNRNPABQ99729 332 aaKnown RBP12.13□□□□□ -0.47
CTTN-208ENST00000498223 ZNF518BQ9C0D4 1074 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 TTYH3Q9C0H2 523 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 PLEKHA4Q9H4M7 779 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 ABCB6Q9NP58 842 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 ACP6Q9NPH0 428 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 CLDND1Q9NY35 253 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 FBXW11Q9UKB1 542 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 TSPAN16Q9UKR8 245 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 MAFFQ9ULX9 164 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 CEP83Q9Y592 693 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 NCOR1O75376 2440 aa12.13□□□□□ -0.47
CTTN-208ENST00000498223 TRIM66O15016 1216 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 LINC01565O15544 149 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 NCK2O43639 380 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 MICAL2O94851 1124 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 HAPLN1P10915 354 aaPredicted RBP12.12□□□□□ -0.47
CTTN-208ENST00000498223 MAP3K7CLP57077 242 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 RBM10P98175 930 aaKnown RBP12.12□□□□□ -0.47
CTTN-208ENST00000498223 KLHL30Q0D2K2 578 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 TWF1Q12792 350 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 PLD1Q13393 1074 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 VEPH1Q14D04 833 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 CNGA2Q16280 664 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 SDHAF4Q5VUM1 108 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 ARHGAP17Q68EM7 881 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 SMYD5Q6GMV2 418 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 VSTM1Q6UX27 236 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 PASD1Q8IV76 773 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 TCEAL8Q8IYN2 117 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 EFHBQ8N7U6 833 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 OR8K1Q8NGG5 319 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 GIPC2Q8TF65 315 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 NECAB3Q96P71 396 aaPredicted RBP12.12□□□□□ -0.47
CTTN-208ENST00000498223 APOL5Q9BWW9 433 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 PIDD1Q9HB75 910 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 DZANK1Q9NVP4 752 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 YIPF1Q9Y548 306 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 INSL5Q9Y5Q6 135 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 OBSL1O75147 1896 aa12.12□□□□□ -0.47
CTTN-208ENST00000498223 ANAPC1Q9H1A4 1944 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 O00370 1275 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 CCL16O15467 120 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 MFAP3LO75121 409 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 ZMYND10O75800 440 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 C1RP00736 705 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 SKILP12757 684 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 TNFAIP3P21580 790 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 MAGEA11P43364 429 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 GPR15P49685 360 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 BCAT1P54687 386 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 BST2Q10589 180 aaKnown RBP12.11□□□□□ -0.47
CTTN-208ENST00000498223 IFRD2Q12894 506 aaPredicted RBP12.11□□□□□ -0.47
CTTN-208ENST00000498223 ADAM15Q13444 863 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 DDR2Q16832 855 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 CFAP221Q4G0U5 840 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 RARS2Q5T160 578 aaKnown RBP12.11□□□□□ -0.47
CTTN-208ENST00000498223 LCLAT1Q6UWP7 414 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 PAQR9Q6ZVX9 377 aa12.11□□□□□ -0.47
CTTN-208ENST00000498223 NOP9Q86U38 636 aaKnown RBP12.11□□□□□ -0.47
CTTN-208ENST00000498223 ANKRD52Q8NB46 1076 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms