RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 SLC8A1P32418 973 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 STAT6P42226 847 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 AFMP43652 599 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 GPR1P46091 355 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 MAPK10P53779 464 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 ATXN1P54253 815 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 SLC18A2Q05940 514 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 DGCR6Q14129 220 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 POSTNQ15063 836 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 RBMY1FQ15415 496 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 PTPN14Q15678 1187 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 SWI5Q1ZZU3 235 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 ARL13BQ3SXY8 428 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 AMZ1Q400G9 498 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 SV2CQ496J9 727 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 DNAJC21Q5F1R6 531 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 THEMIS2Q5TEJ8 643 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 PRAMEF20Q5VT98 475 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 RNF220Q5VTB9 566 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 ATL3Q6DD88 541 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 IQCEQ6IPM2 695 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 TTC23LQ6PF05 361 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 TMEM207Q6UWW9 146 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 UNQ6126/PRO20091Q6UXV3 157 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 Q6ZN92 141 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 CCDC129Q6ZRS4 1044 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 STOX1Q6ZVD7 989 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 CHST3Q7LGC8 479 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 NPM2Q86SE8 214 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 TEX2Q8IWB9 1127 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 GPR135Q8IZ08 494 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 ADSSL1Q8N142 457 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 ARHGAP18Q8N392 663 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 FSTL5Q8N475 847 aaPredicted RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 COLGALT1Q8NBJ5 622 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 DNAAF1Q8NEP3 725 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 TDRD7Q8NHU6 1098 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 SPATA20Q8TB22 786 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 URGCPQ8TCY9 931 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 PPP4R1Q8TF05 950 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 OSCP1Q8WVF1 389 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 L3MBTL2Q969R5 705 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 VWCEQ96DN2 955 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 CCDC17Q96LX7 622 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 TGM7Q96PF1 710 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 NAP1L4Q99733 375 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 KXD1Q9BQD3 176 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 TRMT61BQ9BVS5 477 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 CHRDQ9H2X0 955 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 CERS4Q9HA82 394 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 POPDC2Q9HBU9 364 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 TCP11L1Q9NUJ3 509 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 CCDC87Q9NVE4 849 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 DNAJB12Q9NXW2 375 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 TLR7Q9NYK1 1049 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 MDFICQ9P1T7 246 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 RCOR3Q9P2K3 495 aaPredicted RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 CDH22Q9UJ99 828 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 ESYT3A0FGR9 886 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 MROH6A6NGR9 719 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 CHURC1-FNTBB4DL54 471 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 TGFBR3LH3BV60 316 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 EEF2KO00418 725 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 TOR1AO14656 332 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 NDUFB5O43674 189 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 TSPAN1O60635 241 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 PDE8AO60658 829 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 TMEM63AO94886 807 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 RASGRP1O95267 797 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 ADH4P08319 380 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 HNRNPA1P09651 372 aaKnown RBP eCLIP1.54□□□□□ -2.16
XRN1-214ENST00000498077 ITGAMP11215 1152 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 MYOGP15173 224 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 CD19P15391 556 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 GLRA2P23416 452 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 ACRV1P26436 265 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 HTR1BP28222 390 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 EPHX2P34913 555 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 EVA1CP58658 441 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 RPS3AP61247 264 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 RPL10AP62906 217 aaKnown RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 B4GALNT1Q00973 533 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 GUCY1B3Q02153 619 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 LPIN1Q14693 890 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 KCNAB1Q14722 419 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 KRTAP19-4Q3LI73 84 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 ITPRIPL2Q3MIP1 535 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 E4F1Q66K89 784 aaPredicted RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 CNSTQ6PJW8 725 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 AFTPHQ6ULP2 937 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 KCNT2Q6UVM3 1135 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 RUFY3Q7L099 469 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 TRPM8Q7Z2W7 1104 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 VPS36Q86VN1 386 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 GALNT12Q8IXK2 581 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 LSMEM2Q8N112 164 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 TFAP2BQ92481 460 aa1.54□□□□□ -2.16
XRN1-214ENST00000498077 KIAA1143Q96AT1 154 aaPredicted RBP1.54□□□□□ -2.16
XRN1-214ENST00000498077 SHISA4Q96DD7 197 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms