RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 RHOP08100 348 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 ZKSCAN1P17029 563 aaPredicted RBP3.53□□□□□ -1.84
RIF1-212ENST00000498041 RPL17P18621 184 aaKnown RBP3.53□□□□□ -1.84
RIF1-212ENST00000498041 CACNA2D1P54289 1103 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 KRT17Q04695 432 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 MYO1EQ12965 1108 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 BMPR2Q13873 1038 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 HLTFQ14527 1009 aaKnown RBP eCLIP3.53□□□□□ -1.84
RIF1-212ENST00000498041 TBCCQ15814 346 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 PLA1AQ53H76 456 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 HSP90AB2PQ58FF8 381 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 PLAC9Q5JTB6 97 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 STRIP1Q5VSL9 837 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 DCAF12L1Q5VU92 463 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 RGS7BPQ6MZT1 257 aaPredicted RBP3.53□□□□□ -1.84
RIF1-212ENST00000498041 GRASPQ7Z6J2 395 aaPredicted RBP3.53□□□□□ -1.84
RIF1-212ENST00000498041 MICU3Q86XE3 530 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 ZNF280BQ86YH2 543 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 ATRIPQ8WXE1 791 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 RAPGEF4Q8WZA2 1011 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 MAML1Q92585 1016 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 TRIM43Q96BQ3 446 aaPredicted RBP3.53□□□□□ -1.84
RIF1-212ENST00000498041 NUP62CLQ9H1M0 184 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 RIOX1Q9H6W3 641 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 ALG13Q9NP73 1137 aaKnown RBP3.53□□□□□ -1.84
RIF1-212ENST00000498041 SERHLQ9NQF3 203 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 DDX21Q9NR30 783 aaKnown RBP eCLIP3.53□□□□□ -1.84
RIF1-212ENST00000498041 STK32BQ9NY57 414 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 SLC17A6Q9P2U8 582 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 SERTAD3Q9UJW9 196 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 NDRG4Q9ULP0 352 aaKnown RBP3.53□□□□□ -1.84
RIF1-212ENST00000498041 SSX2IPQ9Y2D8 614 aa3.53□□□□□ -1.84
RIF1-212ENST00000498041 hCG_1984214I3L0E3 225 aa3.52□□□□□ -1.85
RIF1-212ENST00000498041 PYCARD-AS1I3L0S3 204 aa3.52□□□□□ -1.85
RIF1-212ENST00000498041 SLC16A3O15427 465 aaKnown RBP3.52□□□□□ -1.85
RIF1-212ENST00000498041 URI1O94763 535 aaPredicted RBP3.52□□□□□ -1.85
RIF1-212ENST00000498041 NXPH3O95157 252 aa3.52□□□□□ -1.85
RIF1-212ENST00000498041 TTLL1O95922 423 aa3.52□□□□□ -1.85
RIF1-212ENST00000498041 PDHA1P08559 390 aa3.52□□□□□ -1.85
RIF1-212ENST00000498041 HMGB1P09429 215 aaKnown RBP3.52□□□□□ -1.85
RIF1-212ENST00000498041 NR2F6P10588 404 aa3.52□□□□□ -1.85
RIF1-212ENST00000498041 ZFXP17010 805 aaPredicted RBP3.52□□□□□ -1.85
RIF1-212ENST00000498041 KLRC1P26715 233 aa3.52□□□□□ -1.85
RIF1-212ENST00000498041 CLK3P49761 638 aaKnown RBP3.52□□□□□ -1.85
RIF1-212ENST00000498041 DGKEP52429 567 aa3.52□□□□□ -1.85
RIF1-212ENST00000498041 EIF2B5Q13144 721 aaKnown RBP3.52□□□□□ -1.85
RIF1-212ENST00000498041 C3orf38Q5JPI3 329 aa3.52□□□□□ -1.85
RIF1-212ENST00000498041 ZNF618Q5T7W0 954 aa3.52□□□□□ -1.85
RIF1-212ENST00000498041 SLC15A3Q8IY34 581 aa3.52□□□□□ -1.85
RIF1-212ENST00000498041 OR56A3Q8NH54 315 aa3.52□□□□□ -1.85
RIF1-212ENST00000498041 RFKQ969G6 155 aa3.52□□□□□ -1.85
RIF1-212ENST00000498041 SPSB4Q96A44 273 aa3.52□□□□□ -1.85
RIF1-212ENST00000498041 BTBD1Q9H0C5 482 aa3.52□□□□□ -1.85
RIF1-212ENST00000498041 CXorf36Q9H7Y0 433 aa3.52□□□□□ -1.85
RIF1-212ENST00000498041 XPNPEP3Q9NQH7 507 aa3.52□□□□□ -1.85
RIF1-212ENST00000498041 DKK3Q9UBP4 350 aa3.52□□□□□ -1.85
RIF1-212ENST00000498041 MRPS17Q9Y2R5 130 aaKnown RBP3.52□□□□□ -1.85
RIF1-212ENST00000498041 PCDHGB6Q9Y5F9 930 aa3.52□□□□□ -1.85
RIF1-212ENST00000498041 PEG3Q9GZU2 1588 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 LINC00473A8K010 186 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 GCOM1H8Y6P7 765 aaPredicted RBP3.51□□□□□ -1.85
RIF1-212ENST00000498041 FOXN3O00409 490 aaPredicted RBP3.51□□□□□ -1.85
RIF1-212ENST00000498041 MGST3O14880 152 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 RASSF9O75901 435 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 ONECUT2O95948 504 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 KCNA3P22001 575 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 ALDH9A1P49189 494 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 PDE6CP51160 858 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 PRKAG1P54619 331 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 ELLP55199 621 aaPredicted RBP3.51□□□□□ -1.85
RIF1-212ENST00000498041 RPS16P62249 146 aaKnown RBP3.51□□□□□ -1.85
RIF1-212ENST00000498041 SP2Q02086 613 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 HNRNPA0Q13151 305 aaKnown RBP3.51□□□□□ -1.85
RIF1-212ENST00000498041 INSCQ1MX18 579 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 ZIK1Q3SY52 487 aaPredicted RBP3.51□□□□□ -1.85
RIF1-212ENST00000498041 ZDHHC24Q6UX98 284 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 ZNF551Q7Z340 670 aaPredicted RBP3.51□□□□□ -1.85
RIF1-212ENST00000498041 MAVSQ7Z434 540 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 SESTD1Q86VW0 696 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 CCAR1Q8IX12 1150 aaKnown RBP3.51□□□□□ -1.85
RIF1-212ENST00000498041 KRT78Q8N1N4 520 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 BPIFB1Q8TDL5 484 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 ATG4AQ8WYN0 398 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 PHKBQ93100 1093 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 PPP2R3CQ969Q6 453 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 MSLNLQ96KJ4 702 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 UROC1Q96N76 676 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 HAPLN3Q96S86 360 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 PPP1R9BQ96SB3 815 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 STRBPQ96SI9 672 aaKnown RBP3.51□□□□□ -1.85
RIF1-212ENST00000498041 SARGQ9BW04 601 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 STK31Q9BXU1 1019 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 PCGF6Q9BYE7 350 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 GLOD4Q9HC38 313 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 ARHGEF3Q9NR81 526 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 SERTAD4Q9NUC0 356 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 TRMT13Q9NUP7 481 aaKnown RBP3.51□□□□□ -1.85
RIF1-212ENST00000498041 COL20A1Q9P218 1284 aa3.51□□□□□ -1.85
RIF1-212ENST00000498041 RGS17Q9UGC6 210 aaPredicted RBP3.51□□□□□ -1.85
RIF1-212ENST00000498041 SH2B3Q9UQQ2 575 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms