RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 ABI2Q9NYB9 513 aaPredicted RBP21.28■■□□□ 1
CTSD-206ENST00000497544 MAFFQ9ULX9 164 aa21.28■■□□□ 1
CTSD-206ENST00000497544 HCFC2Q9Y5Z7 792 aa21.28■■□□□ 1
CTSD-206ENST00000497544 MYH10P35580 1976 aa21.28■■□□□ 1
CTSD-206ENST00000497544 MTMR11A4FU01 709 aa21.27■■□□□ 1
CTSD-206ENST00000497544 SPDYE4A6NLX3 237 aa21.27■■□□□ 1
CTSD-206ENST00000497544 PRRG1O14668 218 aa21.27■■□□□ 1
CTSD-206ENST00000497544 SRGAP2BP0DMP2 458 aa21.27■■□□□ 1
CTSD-206ENST00000497544 EPCAMP16422 314 aa21.27■■□□□ 1
CTSD-206ENST00000497544 SMAD2Q15796 467 aaKnown RBP21.27■■□□□ 1
CTSD-206ENST00000497544 FIGNQ5HY92 759 aa21.27■■□□□ 1
CTSD-206ENST00000497544 SPECC1LQ69YQ0 1117 aa21.27■■□□□ 1
CTSD-206ENST00000497544 VSTM4Q8IW00 320 aa21.27■■□□□ 1
CTSD-206ENST00000497544 EFHBQ8N7U6 833 aa21.27■■□□□ 1
CTSD-206ENST00000497544 C12orf29Q8N999 325 aa21.27■■□□□ 1
CTSD-206ENST00000497544 CPLX3Q8WVH0 158 aa21.27■■□□□ 1
CTSD-206ENST00000497544 MYLPFQ96A32 169 aa21.27■■□□□ 1
CTSD-206ENST00000497544 PCED1BQ96HM7 432 aa21.27■■□□□ 1
CTSD-206ENST00000497544 IRF2BPLQ9H1B7 796 aa21.27■■□□□ 1
CTSD-206ENST00000497544 PLEKHA4Q9H4M7 779 aa21.27■■□□□ 1
CTSD-206ENST00000497544 FAM49BQ9NUQ9 324 aa21.27■■□□□ 1
CTSD-206ENST00000497544 FBXW11Q9UKB1 542 aa21.27■■□□□ 1
CTSD-206ENST00000497544 CACNA1GO43497 2377 aa21.27■■□□□ 1
CTSD-206ENST00000497544 ATP8B3O60423 1300 aa21.27■□□□□ 0.99
CTSD-206ENST00000497544 ITIH6Q6UXX5 1313 aa21.27■□□□□ 0.99
CTSD-206ENST00000497544 ZFHX4Q86UP3 3567 aa21.26■□□□□ 0.99
CTSD-206ENST00000497544 PRR23AA6NEV1 266 aa21.26■□□□□ 0.99
CTSD-206ENST00000497544 CYP26A1O43174 497 aa21.26■□□□□ 0.99
CTSD-206ENST00000497544 VDRP11473 427 aa21.26■□□□□ 0.99
CTSD-206ENST00000497544 BPIFB4P59827 614 aa21.26■□□□□ 0.99
CTSD-206ENST00000497544 PTK2Q05397 1052 aa21.26■□□□□ 0.99
CTSD-206ENST00000497544 DUSP4Q13115 394 aa21.26■□□□□ 0.99
CTSD-206ENST00000497544 CCDC142Q17RM4 750 aa21.26■□□□□ 0.99
CTSD-206ENST00000497544 SGO2Q562F6 1265 aa21.26■□□□□ 0.99
CTSD-206ENST00000497544 CCDC149Q6ZUS6 474 aa21.26■□□□□ 0.99
CTSD-206ENST00000497544 FAM71AQ8IYT1 594 aa21.26■□□□□ 0.99
CTSD-206ENST00000497544 ZNF397Q8NF99 534 aaPredicted RBP21.26■□□□□ 0.99
CTSD-206ENST00000497544 HDAC7Q8WUI4 952 aa21.26■□□□□ 0.99
CTSD-206ENST00000497544 CASP10Q92851 521 aa21.26■□□□□ 0.99
CTSD-206ENST00000497544 FUBP3Q96I24 572 aaKnown RBP eCLIP21.26■□□□□ 0.99
CTSD-206ENST00000497544 B3GNT5Q9BYG0 378 aa21.26■□□□□ 0.99
CTSD-206ENST00000497544 GPR88Q9GZN0 384 aa21.26■□□□□ 0.99
CTSD-206ENST00000497544 SLC27A5Q9Y2P5 690 aa21.26■□□□□ 0.99
CTSD-206ENST00000497544 F8VZ95 297 aa21.25■□□□□ 0.99
CTSD-206ENST00000497544 H0Y858 1186 aa21.25■□□□□ 0.99
CTSD-206ENST00000497544 CLDN5O00501 218 aa21.25■□□□□ 0.99
CTSD-206ENST00000497544 SEC24AO95486 1093 aa21.25■□□□□ 0.99
CTSD-206ENST00000497544 PNMA6AP0CW24 399 aaPredicted RBP21.25■□□□□ 0.99
CTSD-206ENST00000497544 BDNFP23560 247 aa21.25■□□□□ 0.99
CTSD-206ENST00000497544 SOX5P35711 763 aa21.25■□□□□ 0.99
CTSD-206ENST00000497544 LTBRP36941 435 aa21.25■□□□□ 0.99
CTSD-206ENST00000497544 TUFMP49411 452 aaKnown RBP21.25■□□□□ 0.99
CTSD-206ENST00000497544 JAM2P57087 298 aa21.25■□□□□ 0.99
CTSD-206ENST00000497544 ADAM15Q13444 863 aa21.25■□□□□ 0.99
CTSD-206ENST00000497544 MGAT5BQ3V5L5 792 aa21.25■□□□□ 0.99
CTSD-206ENST00000497544 LIN9Q5TKA1 542 aa21.25■□□□□ 0.99
CTSD-206ENST00000497544 TCEAL8Q8IYN2 117 aa21.25■□□□□ 0.99
CTSD-206ENST00000497544 MRFAP1L1Q96HT8 127 aa21.25■□□□□ 0.99
CTSD-206ENST00000497544 GRPEL1Q9HAV7 217 aa21.25■□□□□ 0.99
CTSD-206ENST00000497544 ABCB6Q9NP58 842 aa21.25■□□□□ 0.99
CTSD-206ENST00000497544 MAN1C1Q9NR34 630 aa21.25■□□□□ 0.99
CTSD-206ENST00000497544 CLDND1Q9NY35 253 aa21.25■□□□□ 0.99
CTSD-206ENST00000497544 HSFX1Q9UBD0 423 aa21.25■□□□□ 0.99
CTSD-206ENST00000497544 MYO6Q9UM54 1294 aa21.25■□□□□ 0.99
CTSD-206ENST00000497544 MED19A0JLT2 244 aaPredicted RBP21.24■□□□□ 0.99
CTSD-206ENST00000497544 GFPT2O94808 682 aa21.24■□□□□ 0.99
CTSD-206ENST00000497544 VNN2O95498 520 aa21.24■□□□□ 0.99
CTSD-206ENST00000497544 TPM1P09493 284 aa21.24■□□□□ 0.99
CTSD-206ENST00000497544 CCDC130P13994 396 aa21.24■□□□□ 0.99
CTSD-206ENST00000497544 ADORA2BP29275 332 aa21.24■□□□□ 0.99
CTSD-206ENST00000497544 GNA15P30679 374 aa21.24■□□□□ 0.99
CTSD-206ENST00000497544 CLCN1P35523 988 aa21.24■□□□□ 0.99
CTSD-206ENST00000497544 ZNF132P52740 706 aa21.24■□□□□ 0.99
CTSD-206ENST00000497544 TRIM14Q14142 442 aa21.24■□□□□ 0.99
CTSD-206ENST00000497544 CFAP221Q4G0U5 840 aa21.24■□□□□ 0.99
CTSD-206ENST00000497544 PPP1R26Q5T8A7 1209 aaPredicted RBP21.24■□□□□ 0.99
CTSD-206ENST00000497544 TMC6Q7Z403 805 aa21.24■□□□□ 0.99
CTSD-206ENST00000497544 FMNL3Q8IVF7 1028 aa21.24■□□□□ 0.99
CTSD-206ENST00000497544 SLC2A14Q8TDB8 520 aa21.24■□□□□ 0.99
CTSD-206ENST00000497544 HNRNPABQ99729 332 aaKnown RBP21.24■□□□□ 0.99
CTSD-206ENST00000497544 CAPN11Q9UMQ6 739 aa21.24■□□□□ 0.99
CTSD-206ENST00000497544 LUC7L2Q9Y383 392 aaKnown RBP21.24■□□□□ 0.99
CTSD-206ENST00000497544 DNAH14Q0VDD8 3507 aa21.24■□□□□ 0.99
CTSD-206ENST00000497544 GVINP1Q7Z2Y8 2422 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 A0A1W2PQJ5 194 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 LINC01565O15544 149 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 THAP12O43422 761 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 MBTPS2O43462 519 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 MED7O43513 233 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 ADCY5O95622 1261 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 C8AP07357 584 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 CCDC172P0C7W6 258 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 HAPLN1P10915 354 aaPredicted RBP21.23■□□□□ 0.99
CTSD-206ENST00000497544 CYP2F1P24903 491 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 BRD2P25440 801 aaKnown RBP21.23■□□□□ 0.99
CTSD-206ENST00000497544 ALDH1A3P47895 512 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 ZXDAP98168 799 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 RBM10P98175 930 aaKnown RBP21.23■□□□□ 0.99
CTSD-206ENST00000497544 KCNC3Q14003 757 aa21.23■□□□□ 0.99
CTSD-206ENST00000497544 STILQ15468 1287 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms