RNA–Protein interactions for RNA: ENST00000497390.5

PCBP4-216, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-216ENST00000497390 TRNP1Q6NT89 227 aa17.14■□□□□ 0.33
PCBP4-216ENST00000497390 ZC3H18Q86VM9 953 aaKnown RBP17.14■□□□□ 0.33
PCBP4-216ENST00000497390 TDRPQ86YL5 185 aa17.14■□□□□ 0.33
PCBP4-216ENST00000497390 ZNF276Q8N554 614 aa17.14■□□□□ 0.33
PCBP4-216ENST00000497390 RFWD2Q8NHY2 731 aa17.14■□□□□ 0.33
PCBP4-216ENST00000497390 COPS5Q92905 334 aa17.14■□□□□ 0.33
PCBP4-216ENST00000497390 C12orf42Q96LP6 360 aa17.14■□□□□ 0.33
PCBP4-216ENST00000497390 SIX4Q9UIU6 781 aa17.14■□□□□ 0.33
PCBP4-216ENST00000497390 STARD13Q9Y3M8 1113 aa17.14■□□□□ 0.33
PCBP4-216ENST00000497390 SSC5DA1L4H1 1573 aa17.14■□□□□ 0.33
PCBP4-216ENST00000497390 GRAP2O75791 330 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 STAM2O75886 525 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 NFICP08651 508 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 KDELR1P24390 212 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 LACTBP83111 547 aaPredicted RBP17.13■□□□□ 0.33
PCBP4-216ENST00000497390 ACVR2BQ13705 512 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 LRRC38Q5VT99 294 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 VSIG1Q86XK7 387 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 GBP7Q8N8V2 638 aaPredicted RBP17.13■□□□□ 0.33
PCBP4-216ENST00000497390 TCP10LQ8TDR4 215 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 LRRC8CQ8TDW0 803 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 PYROXD1Q8WU10 500 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 MZB1Q8WU39 189 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 ZNF75CPQ92670 426 aaPredicted RBP17.13■□□□□ 0.33
PCBP4-216ENST00000497390 TRIM56Q9BRZ2 755 aaKnown RBP17.13■□□□□ 0.33
PCBP4-216ENST00000497390 MRPL4Q9BYD3 311 aaKnown RBP17.13■□□□□ 0.33
PCBP4-216ENST00000497390 PSMC3IPQ9P2W1 217 aaPredicted RBP17.13■□□□□ 0.33
PCBP4-216ENST00000497390 SNCAIPQ9Y6H5 919 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 ATP2A1O14983 1001 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 MAGEB2O15479 319 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 FAM155BO75949 473 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 RXRBP28702 533 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 ICAM3P32942 547 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 BASP1P80723 227 aaKnown RBP17.13■□□□□ 0.33
PCBP4-216ENST00000497390 EFHC2Q5JST6 749 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 RIBC1Q8N443 379 aaPredicted RBP17.13■□□□□ 0.33
PCBP4-216ENST00000497390 SLC7A6OSQ96CW6 309 aaPredicted RBP17.13■□□□□ 0.33
PCBP4-216ENST00000497390 CALN1Q9BXU9 219 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 GINM1Q9NU53 330 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 ZMYND8Q9ULU4 1186 aaPredicted RBP17.13■□□□□ 0.33
PCBP4-216ENST00000497390 SHOC2Q9UQ13 582 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 C15orf41Q9Y2V0 281 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 PAPPA2Q9BXP8 1791 aa17.13■□□□□ 0.33
PCBP4-216ENST00000497390 OGTO15294 1046 aa17.12■□□□□ 0.33
PCBP4-216ENST00000497390 LSM8O95777 96 aaKnown RBP17.12■□□□□ 0.33
PCBP4-216ENST00000497390 EIF4BP23588 611 aaKnown RBP17.12■□□□□ 0.33
PCBP4-216ENST00000497390 EPHB2P29323 1055 aa17.12■□□□□ 0.33
PCBP4-216ENST00000497390 MIPP30301 263 aa17.12■□□□□ 0.33
PCBP4-216ENST00000497390 CLCN3P51790 818 aa17.12■□□□□ 0.33
PCBP4-216ENST00000497390 RAD23BP54727 409 aa17.12■□□□□ 0.33
PCBP4-216ENST00000497390 GEMIN4P57678 1058 aaKnown RBP17.12■□□□□ 0.33
PCBP4-216ENST00000497390 SGSM1Q2NKQ1 1148 aa17.12■□□□□ 0.33
PCBP4-216ENST00000497390 HHATQ5VTY9 493 aa17.12■□□□□ 0.33
PCBP4-216ENST00000497390 XYLT1Q86Y38 959 aa17.12■□□□□ 0.33
PCBP4-216ENST00000497390 UBA3Q8TBC4 463 aa17.12■□□□□ 0.33
PCBP4-216ENST00000497390 TTC25Q96NG3 672 aa17.12■□□□□ 0.33
PCBP4-216ENST00000497390 LRRC37BQ96QE4 947 aa17.12■□□□□ 0.33
PCBP4-216ENST00000497390 CEP83Q9Y592 693 aa17.12■□□□□ 0.33
PCBP4-216ENST00000497390 INO80B-WBP1J3KQ70 363 aa17.12■□□□□ 0.33
PCBP4-216ENST00000497390 GBP2P32456 591 aaPredicted RBP17.12■□□□□ 0.33
PCBP4-216ENST00000497390 CDH5P33151 784 aaPredicted RBP17.12■□□□□ 0.33
PCBP4-216ENST00000497390 YARSP54577 528 aaKnown RBP17.12■□□□□ 0.33
PCBP4-216ENST00000497390 C15orf59Q2T9L4 293 aaPredicted RBP17.12■□□□□ 0.33
PCBP4-216ENST00000497390 TAF1BQ53T94 588 aaPredicted RBP17.12■□□□□ 0.33
PCBP4-216ENST00000497390 FAXCQ5TGI0 409 aa17.12■□□□□ 0.33
PCBP4-216ENST00000497390 DCAF15Q66K64 600 aa17.12■□□□□ 0.33
PCBP4-216ENST00000497390 ZPBP2Q6X784 338 aa17.12■□□□□ 0.33
PCBP4-216ENST00000497390 RFX6Q8HWS3 928 aa17.12■□□□□ 0.33
PCBP4-216ENST00000497390 CCDC33Q8N5R6 958 aa17.12■□□□□ 0.33
PCBP4-216ENST00000497390 NIPA2Q8N8Q9 360 aa17.12■□□□□ 0.33
PCBP4-216ENST00000497390 DCAKDQ8WVC6 231 aa17.12■□□□□ 0.33
PCBP4-216ENST00000497390 INO80BQ9C086 356 aaPredicted RBP17.12■□□□□ 0.33
PCBP4-216ENST00000497390 BRCA2P51587 3418 aa17.12■□□□□ 0.33
PCBP4-216ENST00000497390 CDO1Q16878 200 aa17.11■□□□□ 0.33
PCBP4-216ENST00000497390 ZNF772Q68DY9 489 aaPredicted RBP17.11■□□□□ 0.33
PCBP4-216ENST00000497390 LRRC6Q86X45 466 aa17.11■□□□□ 0.33
PCBP4-216ENST00000497390 NCAPG2Q86XI2 1143 aa17.11■□□□□ 0.33
PCBP4-216ENST00000497390 C1orf127Q8N9H9 656 aa17.11■□□□□ 0.33
PCBP4-216ENST00000497390 SERAC1Q96JX3 654 aa17.11■□□□□ 0.33
PCBP4-216ENST00000497390 ELOVL4Q9GZR5 314 aa17.11■□□□□ 0.33
PCBP4-216ENST00000497390 CYLDQ9NQC7 956 aa17.11■□□□□ 0.33
PCBP4-216ENST00000497390 GGA3Q9NZ52 723 aa17.11■□□□□ 0.33
PCBP4-216ENST00000497390 XPO7Q9UIA9 1087 aaKnown RBP17.11■□□□□ 0.33
PCBP4-216ENST00000497390 PCDHGC3Q9UN70 934 aa17.11■□□□□ 0.33
PCBP4-216ENST00000497390 SIGLEC16A6NMB1 481 aa17.11■□□□□ 0.33
PCBP4-216ENST00000497390 DALRD3Q5D0E6 543 aaKnown RBP17.11■□□□□ 0.33
PCBP4-216ENST00000497390 PRPF39Q86UA1 669 aaKnown RBP17.11■□□□□ 0.33
PCBP4-216ENST00000497390 MTDHQ86UE4 582 aaKnown RBP17.11■□□□□ 0.33
PCBP4-216ENST00000497390 PPIL6Q8IXY8 311 aa17.11■□□□□ 0.33
PCBP4-216ENST00000497390 KCTD6Q8NC69 237 aa17.11■□□□□ 0.33
PCBP4-216ENST00000497390 CCHCR1Q8TD31 782 aa17.11■□□□□ 0.33
PCBP4-216ENST00000497390 RSAD2Q8WXG1 361 aa17.11■□□□□ 0.33
PCBP4-216ENST00000497390 NRBP2Q9NSY0 501 aa17.11■□□□□ 0.33
PCBP4-216ENST00000497390 GPATCH2LQ9NWQ4 482 aa17.11■□□□□ 0.33
PCBP4-216ENST00000497390 WDR90Q96KV7 1748 aa17.11■□□□□ 0.33
PCBP4-216ENST00000497390 SKAP2O75563 359 aaPredicted RBP17.1■□□□□ 0.33
PCBP4-216ENST00000497390 PTPN7P35236 360 aa17.1■□□□□ 0.33
PCBP4-216ENST00000497390 RFC5P40937 340 aa17.1■□□□□ 0.33
PCBP4-216ENST00000497390 ELK3P41970 407 aa17.1■□□□□ 0.33
PCBP4-216ENST00000497390 CLNS1AP54105 237 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms