RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 CCDC33Q8N5R6 958 aa13.57□□□□□ -0.24
VEGFA-215ENST00000497139 TTC13Q8NBP0 860 aa13.57□□□□□ -0.24
VEGFA-215ENST00000497139 SHC3Q92529 594 aa13.57□□□□□ -0.24
VEGFA-215ENST00000497139 DCUN1D1Q96GG9 259 aa13.57□□□□□ -0.24
VEGFA-215ENST00000497139 COX4I2Q96KJ9 171 aa13.57□□□□□ -0.24
VEGFA-215ENST00000497139 OSBPL6Q9BZF3 934 aa13.57□□□□□ -0.24
VEGFA-215ENST00000497139 EFR3BQ9Y2G0 817 aa13.57□□□□□ -0.24
VEGFA-215ENST00000497139 RABGAP1Q9Y3P9 1069 aa13.57□□□□□ -0.24
VEGFA-215ENST00000497139 PLIN4Q96Q06 1357 aa13.57□□□□□ -0.24
VEGFA-215ENST00000497139 DENND3A2RUS2 1198 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 RAG1P15918 1043 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 ZNF12P17014 697 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 VCPP55072 806 aaKnown RBP13.56□□□□□ -0.24
VEGFA-215ENST00000497139 MFAP3P55082 362 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 HDAC4P56524 1084 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 GSTO1P78417 241 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 ZNF200P98182 395 aaPredicted RBP13.56□□□□□ -0.24
VEGFA-215ENST00000497139 RARS2Q5T160 578 aaKnown RBP13.56□□□□□ -0.24
VEGFA-215ENST00000497139 POTEAQ6S8J7 498 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 KBTBD6Q86V97 674 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 PYROXD1Q8WU10 500 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 PSMD13Q9UNM6 376 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 LTBP4Q8N2S1 1624 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 CLUHO75153 1309 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 DDX60LQ5H9U9 1706 aaKnown RBP13.56□□□□□ -0.24
VEGFA-215ENST00000497139 FAM189A1O60320 539 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 DKC1O60832 514 aaKnown RBP eCLIP13.56□□□□□ -0.24
VEGFA-215ENST00000497139 PROSCO94903 275 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 STAT3P40763 770 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 HALP42357 657 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 CDK8P49336 464 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 CYP2J2P51589 502 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 ARSEP51690 589 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 CNGA3Q16281 694 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 POTEHQ6S545 545 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 NSMFQ6X4W1 530 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 TTC17Q96AE7 1141 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 SGF29Q96ES7 293 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 FAM20AQ96MK3 541 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 GCNAQ96QF7 691 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 TCHPQ9BT92 498 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 PSTPIP2Q9H939 334 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 PARVGQ9HBI0 331 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 PCDH9Q9HC56 1237 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 UBAP1Q9NZ09 502 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 INPP5FQ9Y2H2 1132 aa13.56□□□□□ -0.24
VEGFA-215ENST00000497139 SPDYE16A6NNV3 312 aaPredicted RBP13.55□□□□□ -0.24
VEGFA-215ENST00000497139 ZNF23P17027 643 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 GLRA2P23416 452 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 SERPINB6P35237 376 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 PPARGP37231 505 aaPredicted RBP13.55□□□□□ -0.24
VEGFA-215ENST00000497139 PFKPQ01813 784 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 GPS1Q13098 491 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 DEPTORQ8TB45 409 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 FAM111AQ96PZ2 611 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 KLC2Q9H0B6 622 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 ZNF180Q9UJW8 692 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 ZHX2Q9Y6X8 837 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 EMSYQ7Z589 1322 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 C2orf71A6NGG8 1288 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 PRR5-ARHGAP8B1AHC4 643 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 E7ESA3 106 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 ITM2AO43736 263 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 SRGAP2CP0DJJ0 459 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 SRGAP2BP0DMP2 458 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 CYP11B1P15538 503 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 HIRAP54198 1017 aaPredicted RBP13.55□□□□□ -0.24
VEGFA-215ENST00000497139 ARHGAP8P85298 464 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 MYBPC1Q00872 1141 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 LLGL1Q15334 1064 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 HSF5Q4G112 596 aaPredicted RBP13.55□□□□□ -0.24
VEGFA-215ENST00000497139 RINT1Q6NUQ1 792 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 SH2D5Q6ZV89 423 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 ZNF720Q7Z2F6 126 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 CRLF3Q8IUI8 442 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 PQLC1Q8N2U9 271 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 MYCT1Q8N699 235 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 SLC44A5Q8NCS7 719 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 ADCY4Q8NFM4 1077 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.55□□□□□ -0.24
VEGFA-215ENST00000497139 TBC1D23Q9NUY8 699 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 MKS1Q9NXB0 559 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 RRN3Q9NYV6 651 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 CDH22Q9UJ99 828 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 SDR42E2A6NKP2 422 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 ZNF701M0R085 212 aaPredicted RBP13.55□□□□□ -0.24
VEGFA-215ENST00000497139 NTSR2O95665 410 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 CRTAMO95727 393 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 HIBADHP31937 336 aaKnown RBP13.55□□□□□ -0.24
VEGFA-215ENST00000497139 PHKA2P46019 1235 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 COPAP53621 1224 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 AP3B2Q13367 1082 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 TFDP1Q14186 410 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 SCAIQ8N9R8 606 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 HEMGNQ9BXL5 484 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 FAM96AQ9H5X1 160 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 KCND2Q9NZV8 630 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 TDRKHQ9Y2W6 561 aaKnown RBP13.55□□□□□ -0.24
VEGFA-215ENST00000497139 AP4B1Q9Y6B7 739 aa13.55□□□□□ -0.24
VEGFA-215ENST00000497139 CAPN8A6NHC0 703 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms