RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 CDK5RAP1Q96SZ6 601 aaKnown RBP8.08□□□□□ -1.12
CDHR3-214ENST00000496633 MRPL45Q9BRJ2 306 aaKnown RBP8.08□□□□□ -1.12
CDHR3-214ENST00000496633 GZF1Q9H116 711 aaPredicted RBP8.08□□□□□ -1.12
CDHR3-214ENST00000496633 DNAJC25Q9H1X3 360 aa8.08□□□□□ -1.12
CDHR3-214ENST00000496633 BRD9Q9H8M2 597 aa8.08□□□□□ -1.12
CDHR3-214ENST00000496633 DMAP1Q9NPF5 467 aaPredicted RBP8.08□□□□□ -1.12
CDHR3-214ENST00000496633 TRPM5Q9NZQ8 1165 aa8.08□□□□□ -1.12
CDHR3-214ENST00000496633 CDH22Q9UJ99 828 aa8.08□□□□□ -1.12
CDHR3-214ENST00000496633 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.08□□□□□ -1.12
CDHR3-214ENST00000496633 MYO10Q9HD67 2058 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 NCANO14594 1321 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 TRIOO75962 3097 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 SLC38A8A6NNN8 435 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 PPP1R3GB7ZBB8 358 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 ZNF263O14978 683 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 CHADO15335 359 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 VNN1O95497 513 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 VNN2O95498 520 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 USP17L7P0C7H9 530 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 TRIM49P0CI25 452 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 TRIM49CP0CI26 452 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 CEBPBP17676 345 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 ATF6P18850 670 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 BDNFP23560 247 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 ACAT1P24752 427 aaKnown RBP8.07□□□□□ -1.12
CDHR3-214ENST00000496633 CYP2F1P24903 491 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 LMO2P25791 158 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 ASPAP45381 313 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 PSEN1P49768 467 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 NLRP12P59046 1061 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 NTHL1P78549 312 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 PPP3CAQ08209 521 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 GOLGA8FQ08AF8 430 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 GOLGA8DPQ0D2H9 430 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 PPP2R5DQ14738 602 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 STILQ15468 1287 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 SLC5A9Q2M3M2 681 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 MDH1BQ5I0G3 518 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 FAM78AQ5JUQ0 283 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 ASTLQ6HA08 431 aaPredicted RBP8.07□□□□□ -1.12
CDHR3-214ENST00000496633 KLHL10Q6JEL2 608 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 TTI2Q6NXR4 508 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 PARM1Q6UWI2 310 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 HFE2Q6ZVN8 426 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 OSTM1Q86WC4 334 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 CMTM8Q8IZV2 173 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 ANKRD20A12PQ8NF67 263 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 SHKBP1Q8TBC3 707 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 PLEKHO2Q8TD55 490 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 TAS1R2Q8TE23 839 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 FGF14Q92915 247 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 ASIC4Q96FT7 647 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 NT5C1BQ96P26 610 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 MED10Q9BTT4 135 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 TTLL2Q9BWV7 592 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 LRRC3Q9BY71 257 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 UBXN6Q9BZV1 441 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 CRISPLD1Q9H336 500 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 THAP9Q9H5L6 903 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 C8orf33Q9H7E9 229 aaPredicted RBP8.07□□□□□ -1.12
CDHR3-214ENST00000496633 CRTAC1Q9NQ79 661 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 ARHGEF3Q9NR81 526 aa8.07□□□□□ -1.12
CDHR3-214ENST00000496633 MAGED2Q9UNF1 606 aaPredicted RBP8.07□□□□□ -1.12
CDHR3-214ENST00000496633 GTPBP10A4D1E9 387 aaKnown RBP8.06□□□□□ -1.12
CDHR3-214ENST00000496633 SLC9A3R1O14745 358 aaPredicted RBP8.06□□□□□ -1.12
CDHR3-214ENST00000496633 CILPO75339 1184 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 AFPP02771 609 aaKnown RBP8.06□□□□□ -1.12
CDHR3-214ENST00000496633 F11P03951 625 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 FAM200BP0CF97 657 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 TCF3P15923 654 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 HMGA1P17096 107 aaKnown RBP8.06□□□□□ -1.12
CDHR3-214ENST00000496633 AOC1P19801 751 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 COL9A1P20849 921 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 FMO5P49326 533 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 TUBP50607 506 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 NDST1P52848 882 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 PTPN5P54829 565 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 STARD6P59095 220 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 PSMC1P62191 440 aaKnown RBP8.06□□□□□ -1.12
CDHR3-214ENST00000496633 GPC5P78333 572 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 GCNT1Q02742 428 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 FCHO2Q0JRZ9 810 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 NR1H3Q13133 447 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 PDGFRLQ15198 375 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 TEAD2Q15562 447 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 CAMK4Q16566 473 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 DDR2Q16832 855 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 PREPLQ4J6C6 727 aaPredicted RBP8.06□□□□□ -1.12
CDHR3-214ENST00000496633 C1orf220Q5T0J3 134 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 SASS6Q6UVJ0 657 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 ZNF852Q6ZMS4 543 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 GPIHBP1Q8IV16 184 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 ARID3BQ8IVW6 561 aaPredicted RBP8.06□□□□□ -1.12
CDHR3-214ENST00000496633 SIX5Q8N196 739 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 ARHGAP18Q8N392 663 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 BPIFB1Q8TDL5 484 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 GIPC2Q8TF65 315 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 ING5Q8WYH8 240 aa8.06□□□□□ -1.12
CDHR3-214ENST00000496633 KHSRPQ92945 711 aaKnown RBP eCLIP8.06□□□□□ -1.12
CDHR3-214ENST00000496633 SLC35C1Q96A29 364 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms