RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 BCAT1P54687 386 aa23.05■■□□□ 1.28
C9orf3-222ENST00000496567 HYAL1Q12794 435 aa23.05■■□□□ 1.28
C9orf3-222ENST00000496567 E4F1Q66K89 784 aaPredicted RBP23.05■■□□□ 1.28
C9orf3-222ENST00000496567 SPATA31D4Q6ZUB0 917 aa23.05■■□□□ 1.28
C9orf3-222ENST00000496567 TC2NQ8N9U0 490 aa23.05■■□□□ 1.28
C9orf3-222ENST00000496567 SEPT5Q99719 369 aaPredicted RBP23.05■■□□□ 1.28
C9orf3-222ENST00000496567 DUSP16Q9BY84 665 aa23.05■■□□□ 1.28
C9orf3-222ENST00000496567 IGFLR1Q9H665 355 aa23.05■■□□□ 1.28
C9orf3-222ENST00000496567 KRT82Q9NSB4 513 aa23.05■■□□□ 1.28
C9orf3-222ENST00000496567 NOCTQ9UK39 431 aaKnown RBP23.05■■□□□ 1.28
C9orf3-222ENST00000496567 TRIM66O15016 1216 aa23.04■■□□□ 1.28
C9orf3-222ENST00000496567 NCK2O43639 380 aa23.04■■□□□ 1.28
C9orf3-222ENST00000496567 MICAL2O94851 1124 aa23.04■■□□□ 1.28
C9orf3-222ENST00000496567 SERPING1P05155 500 aa23.04■■□□□ 1.28
C9orf3-222ENST00000496567 SRGAP2BP0DMP2 458 aa23.04■■□□□ 1.28
C9orf3-222ENST00000496567 GRIK1P39086 918 aa23.04■■□□□ 1.28
C9orf3-222ENST00000496567 RPL10AP62906 217 aaKnown RBP23.04■■□□□ 1.28
C9orf3-222ENST00000496567 CDR2Q01850 454 aa23.04■■□□□ 1.28
C9orf3-222ENST00000496567 GOLGA8FQ08AF8 430 aa23.04■■□□□ 1.28
C9orf3-222ENST00000496567 GOLGA8DPQ0D2H9 430 aa23.04■■□□□ 1.28
C9orf3-222ENST00000496567 TAF3Q5VWG9 929 aa23.04■■□□□ 1.28
C9orf3-222ENST00000496567 EFHBQ8N7U6 833 aa23.04■■□□□ 1.28
C9orf3-222ENST00000496567 MYLIPQ8WY64 445 aa23.04■■□□□ 1.28
C9orf3-222ENST00000496567 DDX1Q92499 740 aaKnown RBP23.04■■□□□ 1.28
C9orf3-222ENST00000496567 RHOBTB2Q9BYZ6 727 aa23.04■■□□□ 1.28
C9orf3-222ENST00000496567 CRISPLD1Q9H336 500 aa23.04■■□□□ 1.28
C9orf3-222ENST00000496567 HAUS4Q9H6D7 363 aa23.04■■□□□ 1.28
C9orf3-222ENST00000496567 DMAP1Q9NPF5 467 aaPredicted RBP23.04■■□□□ 1.28
C9orf3-222ENST00000496567 MAN1C1Q9NR34 630 aa23.04■■□□□ 1.28
C9orf3-222ENST00000496567 CEP83Q9Y592 693 aa23.04■■□□□ 1.28
C9orf3-222ENST00000496567 M0QYV0 167 aa23.03■■□□□ 1.28
C9orf3-222ENST00000496567 NPR3P17342 541 aa23.03■■□□□ 1.28
C9orf3-222ENST00000496567 ALDH1A3P47895 512 aa23.03■■□□□ 1.28
C9orf3-222ENST00000496567 BST2Q10589 180 aaKnown RBP23.03■■□□□ 1.28
C9orf3-222ENST00000496567 KCNC3Q14003 757 aa23.03■■□□□ 1.28
C9orf3-222ENST00000496567 TDRD12Q587J7 1177 aaKnown RBP23.03■■□□□ 1.28
C9orf3-222ENST00000496567 LLGL2Q6P1M3 1020 aa23.03■■□□□ 1.28
C9orf3-222ENST00000496567 TTC9BQ8N6N2 239 aa23.03■■□□□ 1.28
C9orf3-222ENST00000496567 CASP10Q92851 521 aa23.03■■□□□ 1.28
C9orf3-222ENST00000496567 CSNK1G1Q9HCP0 422 aa23.03■■□□□ 1.28
C9orf3-222ENST00000496567 MTMR10Q9NXD2 777 aa23.03■■□□□ 1.28
C9orf3-222ENST00000496567 PTPRDP23468 1912 aa23.03■■□□□ 1.28
C9orf3-222ENST00000496567 MTCL1Q9Y4B5 1905 aaKnown RBP23.02■■□□□ 1.28
C9orf3-222ENST00000496567 C8AP07357 584 aa23.02■■□□□ 1.28
C9orf3-222ENST00000496567 SETSIPP0DME0 302 aa23.02■■□□□ 1.28
C9orf3-222ENST00000496567 SKILP12757 684 aa23.02■■□□□ 1.28
C9orf3-222ENST00000496567 ANXA13P27216 316 aa23.02■■□□□ 1.28
C9orf3-222ENST00000496567 GTF2F1P35269 517 aaKnown RBP eCLIP23.02■■□□□ 1.28
C9orf3-222ENST00000496567 GSDMDP57764 484 aa23.02■■□□□ 1.28
C9orf3-222ENST00000496567 PLD1Q13393 1074 aa23.02■■□□□ 1.28
C9orf3-222ENST00000496567 CLEC20AQ6ZU45 233 aa23.02■■□□□ 1.28
C9orf3-222ENST00000496567 TTC30AQ86WT1 665 aa23.02■■□□□ 1.28
C9orf3-222ENST00000496567 SCN4BQ8IWT1 228 aa23.02■■□□□ 1.28
C9orf3-222ENST00000496567 SLC7A14Q8TBB6 771 aa23.02■■□□□ 1.28
C9orf3-222ENST00000496567 SLC20A1Q8WUM9 679 aa23.02■■□□□ 1.28
C9orf3-222ENST00000496567 C8orf48Q96LL4 319 aa23.02■■□□□ 1.28
C9orf3-222ENST00000496567 CEP295NLQ96MC4 621 aa23.02■■□□□ 1.28
C9orf3-222ENST00000496567 GUCD1Q96NT3 240 aa23.02■■□□□ 1.28
C9orf3-222ENST00000496567 PANX2Q96RD6 677 aa23.02■■□□□ 1.28
C9orf3-222ENST00000496567 AGPAT1Q99943 283 aa23.02■■□□□ 1.28
C9orf3-222ENST00000496567 LHX5Q9H2C1 402 aa23.02■■□□□ 1.28
C9orf3-222ENST00000496567 INSL5Q9Y5Q6 135 aa23.02■■□□□ 1.28
C9orf3-222ENST00000496567 PRRC2BQ5JSZ5 2229 aaKnown RBP23.02■■□□□ 1.28
C9orf3-222ENST00000496567 MMEP08473 750 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 FOSL2P15408 326 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 PKDCCQ504Y2 493 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 HGSNATQ68CP4 663 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 TMEM184AQ6ZMB5 413 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 VPS36Q86VN1 386 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 MICALL1Q8N3F8 863 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 UBA3Q8TBC4 463 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 SMOQ99835 787 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 DZANK1Q9NVP4 752 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 YIPF1Q9Y548 306 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 SPDYE4A6NLX3 237 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 F8VP50 259 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 LRG1P02750 347 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 TNFAIP3P21580 790 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 SSTR3P32745 418 aaPredicted RBP23.01■■□□□ 1.27
C9orf3-222ENST00000496567 MAP3K7CLP57077 242 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 FMO1Q01740 532 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 PPM1LQ5SGD2 360 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 WDR59Q6PJI9 974 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 TRIM72Q6ZMU5 477 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 KCNK16Q96T55 309 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 UBXN6Q9BZV1 441 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 PNPLA8Q9NP80 782 aa23.01■■□□□ 1.27
C9orf3-222ENST00000496567 XPO1O14980 1071 aaKnown RBP23■■□□□ 1.27
C9orf3-222ENST00000496567 ZMYND10O75800 440 aa23■■□□□ 1.27
C9orf3-222ENST00000496567 LSM8O95777 96 aaKnown RBP23■■□□□ 1.27
C9orf3-222ENST00000496567 CFHP08603 1231 aa23■■□□□ 1.27
C9orf3-222ENST00000496567 CHRNB2P17787 502 aa23■■□□□ 1.27
C9orf3-222ENST00000496567 HOXA9P31269 272 aa23■■□□□ 1.27
C9orf3-222ENST00000496567 GPD2P43304 727 aa23■■□□□ 1.27
C9orf3-222ENST00000496567 CACNA2D1P54289 1103 aa23■■□□□ 1.27
C9orf3-222ENST00000496567 CDK17Q00537 523 aa23■■□□□ 1.27
C9orf3-222ENST00000496567 PDE4CQ08493 712 aa23■■□□□ 1.27
C9orf3-222ENST00000496567 ADAM15Q13444 863 aa23■■□□□ 1.27
C9orf3-222ENST00000496567 DDR2Q16832 855 aa23■■□□□ 1.27
C9orf3-222ENST00000496567 DENND1BQ6P3S1 775 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms