RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 CEP57L1Q8IYX8 460 aa13.85□□□□□ -0.19
FN1-226ENST00000496542 RIN3Q8TB24 985 aa13.85□□□□□ -0.19
FN1-226ENST00000496542 FAM83CQ9BQN1 747 aa13.85□□□□□ -0.19
FN1-226ENST00000496542 MRPL45Q9BRJ2 306 aaKnown RBP13.85□□□□□ -0.19
FN1-226ENST00000496542 SNX25Q9H3E2 840 aa13.85□□□□□ -0.19
FN1-226ENST00000496542 HPS4Q9NQG7 708 aa13.85□□□□□ -0.19
FN1-226ENST00000496542 MAGEC2Q9UBF1 373 aaPredicted RBP13.85□□□□□ -0.19
FN1-226ENST00000496542 CFAP45Q9UL16 551 aa13.85□□□□□ -0.19
FN1-226ENST00000496542 RAB23Q9ULC3 237 aa13.85□□□□□ -0.19
FN1-226ENST00000496542 HELZP42694 1942 aaKnown RBP13.84□□□□□ -0.19
FN1-226ENST00000496542 TRAV19A0A0A6YYK7 116 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 PVALEFA0A1B0GWK0 134 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 SOBPA7XYQ1 873 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 CHURC1-FNTBB4DL54 471 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 CLSTN1O94985 981 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 CKMP06732 381 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 ANXA13P27216 316 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 GRIK1P39086 918 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 FNTBP49356 437 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 SNRPFP62306 86 aaKnown RBP13.84□□□□□ -0.19
FN1-226ENST00000496542 TNNC1P63316 161 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 FOXK2Q01167 660 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 DMWDQ09019 674 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 TRPC3Q13507 836 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 RUNX3Q13761 415 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 CCINQ13939 588 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 ZNF268Q14587 947 aaPredicted RBP13.84□□□□□ -0.19
FN1-226ENST00000496542 MAPRE1Q15691 268 aaKnown RBP13.84□□□□□ -0.19
FN1-226ENST00000496542 BMT2Q1RMZ1 405 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 MDH1BQ5I0G3 518 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 HEATR6Q6AI08 1181 aaKnown RBP13.84□□□□□ -0.19
FN1-226ENST00000496542 PRR23BQ6ZRT6 265 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 OR6B3Q8NGW1 331 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 MYRFLQ96LU7 910 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 SLC22A12Q96S37 553 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 CYP2S1Q96SQ9 504 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 C2orf42Q9NWW7 574 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 SERTAD1Q9UHV2 236 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 GMEB2Q9UKD1 530 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 RALGAPA1Q6GYQ0 2036 aa13.84□□□□□ -0.19
FN1-226ENST00000496542 DNAH14Q0VDD8 3507 aa13.83□□□□□ -0.2
FN1-226ENST00000496542 C2orf78A6NCI8 922 aa13.83□□□□□ -0.2
FN1-226ENST00000496542 OTOL1A6NHN0 477 aaPredicted RBP13.83□□□□□ -0.2
FN1-226ENST00000496542 K7ESF4 209 aa13.83□□□□□ -0.2
FN1-226ENST00000496542 EXOC3O60645 756 aa13.83□□□□□ -0.2
FN1-226ENST00000496542 PHACTR2O75167 634 aa13.83□□□□□ -0.2
FN1-226ENST00000496542 CST3P01034 146 aaPredicted RBP13.83□□□□□ -0.2
FN1-226ENST00000496542 USP17L7P0C7H9 530 aa13.83□□□□□ -0.2
FN1-226ENST00000496542 GNL1P36915 607 aaPredicted RBP13.83□□□□□ -0.2
FN1-226ENST00000496542 CASP4P49662 377 aa13.83□□□□□ -0.2
FN1-226ENST00000496542 MYL6P60660 151 aa13.83□□□□□ -0.2
FN1-226ENST00000496542 FAM160A1Q05DH4 1040 aa13.83□□□□□ -0.2
FN1-226ENST00000496542 GRSF1Q12849 480 aaKnown RBP eCLIP13.83□□□□□ -0.2
FN1-226ENST00000496542 KCNB1Q14721 858 aa13.83□□□□□ -0.2
FN1-226ENST00000496542 MTF1Q14872 753 aa13.83□□□□□ -0.2
FN1-226ENST00000496542 PDGFRLQ15198 375 aa13.83□□□□□ -0.2
FN1-226ENST00000496542 KNOP1Q1ED39 458 aaKnown RBP13.83□□□□□ -0.2
FN1-226ENST00000496542 WDR72Q3MJ13 1102 aa13.83□□□□□ -0.2
FN1-226ENST00000496542 VSTM1Q6UX27 236 aa13.83□□□□□ -0.2
FN1-226ENST00000496542 ERMP1Q7Z2K6 904 aa13.83□□□□□ -0.2
FN1-226ENST00000496542 C12orf56Q8IXR9 622 aa13.83□□□□□ -0.2
FN1-226ENST00000496542 ARL14EPQ8N8R7 260 aaPredicted RBP13.83□□□□□ -0.2
FN1-226ENST00000496542 FSIP1Q8NA03 581 aa13.83□□□□□ -0.2
FN1-226ENST00000496542 PCED1BQ96HM7 432 aa13.83□□□□□ -0.2
FN1-226ENST00000496542 GZF1Q9H116 711 aaPredicted RBP13.83□□□□□ -0.2
FN1-226ENST00000496542 EXOC1Q9NV70 894 aa13.83□□□□□ -0.2
FN1-226ENST00000496542 CGNQ9P2M7 1197 aaKnown RBP13.83□□□□□ -0.2
FN1-226ENST00000496542 NXF1Q9UBU9 619 aaKnown RBP13.83□□□□□ -0.2
FN1-226ENST00000496542 RCOR1Q9UKL0 485 aa13.83□□□□□ -0.2
FN1-226ENST00000496542 USP18Q9UMW8 372 aa13.83□□□□□ -0.2
FN1-226ENST00000496542 ACTN4O43707 911 aaKnown RBP13.82□□□□□ -0.2
FN1-226ENST00000496542 PAPSS2O95340 614 aaPredicted RBP13.82□□□□□ -0.2
FN1-226ENST00000496542 SLFN14P0C7P3 912 aa13.82□□□□□ -0.2
FN1-226ENST00000496542 HOXC13P31276 330 aa13.82□□□□□ -0.2
FN1-226ENST00000496542 IFNAR2P48551 515 aa13.82□□□□□ -0.2
FN1-226ENST00000496542 USP46P62068 366 aa13.82□□□□□ -0.2
FN1-226ENST00000496542 USP4Q13107 963 aa13.82□□□□□ -0.2
FN1-226ENST00000496542 SRSF5Q13243 272 aaKnown RBP13.82□□□□□ -0.2
FN1-226ENST00000496542 BIRC3Q13489 604 aa13.82□□□□□ -0.2
FN1-226ENST00000496542 ZNF77Q15935 545 aa13.82□□□□□ -0.2
FN1-226ENST00000496542 NAIF1Q69YI7 327 aaPredicted RBP13.82□□□□□ -0.2
FN1-226ENST00000496542 FSTL4Q6MZW2 842 aa13.82□□□□□ -0.2
FN1-226ENST00000496542 PKN3Q6P5Z2 889 aa13.82□□□□□ -0.2
FN1-226ENST00000496542 SYNPOQ8N3V7 929 aa13.82□□□□□ -0.2
FN1-226ENST00000496542 CPA6Q8N4T0 437 aa13.82□□□□□ -0.2
FN1-226ENST00000496542 GOLGA5Q8TBA6 731 aa13.82□□□□□ -0.2
FN1-226ENST00000496542 MYCBPAPQ8TBZ2 947 aa13.82□□□□□ -0.2
FN1-226ENST00000496542 ZNF516Q92618 1163 aa13.82□□□□□ -0.2
FN1-226ENST00000496542 CHFRQ96EP1 664 aa13.82□□□□□ -0.2
FN1-226ENST00000496542 PAGE5Q96GU1 130 aa13.82□□□□□ -0.2
FN1-226ENST00000496542 SPATA17Q96L03 361 aa13.82□□□□□ -0.2
FN1-226ENST00000496542 DPEP3Q9H4B8 488 aa13.82□□□□□ -0.2
FN1-226ENST00000496542 DUS2Q9NX74 493 aaKnown RBP13.82□□□□□ -0.2
FN1-226ENST00000496542 NME7Q9Y5B8 376 aa13.82□□□□□ -0.2
FN1-226ENST00000496542 WNT6Q9Y6F9 365 aa13.82□□□□□ -0.2
FN1-226ENST00000496542 CNOT1A5YKK6 2376 aaKnown RBP13.82□□□□□ -0.2
FN1-226ENST00000496542 TPRP12270 2363 aaKnown RBP13.82□□□□□ -0.2
FN1-226ENST00000496542 A0A1B0GVL5 298 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 F8VP50 259 aa13.81□□□□□ -0.2
FN1-226ENST00000496542 TRIM66O15016 1216 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms