RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 GLOD4Q9HC38 313 aa7.03□□□□□ -1.28
SF3B1-212ENST00000496458 SERTAD4Q9NUC0 356 aa7.03□□□□□ -1.28
SF3B1-212ENST00000496458 ADAM21Q9UKJ8 722 aa7.03□□□□□ -1.28
SF3B1-212ENST00000496458 TPCN1Q9ULQ1 816 aa7.03□□□□□ -1.28
SF3B1-212ENST00000496458 FESP07332 822 aa7.02□□□□□ -1.29
SF3B1-212ENST00000496458 IL6RP08887 468 aaPredicted RBP7.02□□□□□ -1.29
SF3B1-212ENST00000496458 ALDH9A1P49189 494 aa7.02□□□□□ -1.29
SF3B1-212ENST00000496458 CACNB3P54284 484 aa7.02□□□□□ -1.29
SF3B1-212ENST00000496458 SUMO3P55854 103 aaPredicted RBP7.02□□□□□ -1.29
SF3B1-212ENST00000496458 SLC44A4Q53GD3 710 aa7.02□□□□□ -1.29
SF3B1-212ENST00000496458 PLA1AQ53H76 456 aa7.02□□□□□ -1.29
SF3B1-212ENST00000496458 DEPDC1Q5TB30 811 aa7.02□□□□□ -1.29
SF3B1-212ENST00000496458 DCAF12L1Q5VU92 463 aa7.02□□□□□ -1.29
SF3B1-212ENST00000496458 GAS2L3Q86XJ1 694 aa7.02□□□□□ -1.29
SF3B1-212ENST00000496458 SLC15A3Q8IY34 581 aa7.02□□□□□ -1.29
SF3B1-212ENST00000496458 FAM156AQ8NDB6 213 aa7.02□□□□□ -1.29
SF3B1-212ENST00000496458 SACM1LQ9NTJ5 587 aa7.02□□□□□ -1.29
SF3B1-212ENST00000496458 STK32BQ9NY57 414 aa7.02□□□□□ -1.29
SF3B1-212ENST00000496458 CPNE7Q9UBL6 633 aa7.02□□□□□ -1.29
SF3B1-212ENST00000496458 WNT6Q9Y6F9 365 aa7.02□□□□□ -1.29
SF3B1-212ENST00000496458 PROP1O75360 226 aa7.01□□□□□ -1.29
SF3B1-212ENST00000496458 CSF1RP07333 972 aa7.01□□□□□ -1.29
SF3B1-212ENST00000496458 ATF3P18847 181 aa7.01□□□□□ -1.29
SF3B1-212ENST00000496458 PDE6CP51160 858 aa7.01□□□□□ -1.29
SF3B1-212ENST00000496458 SOX10P56693 466 aa7.01□□□□□ -1.29
SF3B1-212ENST00000496458 MRPS21P82921 87 aaKnown RBP7.01□□□□□ -1.29
SF3B1-212ENST00000496458 TTC8Q8TAM2 541 aa7.01□□□□□ -1.29
SF3B1-212ENST00000496458 LRTOMTQ8WZ04 291 aa7.01□□□□□ -1.29
SF3B1-212ENST00000496458 GLG1Q92896 1179 aa7.01□□□□□ -1.29
SF3B1-212ENST00000496458 SUCLG2Q96I99 432 aa7.01□□□□□ -1.29
SF3B1-212ENST00000496458 ZNF518BQ9C0D4 1074 aa7.01□□□□□ -1.29
SF3B1-212ENST00000496458 FRMPD2Q68DX3 1309 aaPredicted RBP7.01□□□□□ -1.29
SF3B1-212ENST00000496458 TPP1O14773 563 aa7□□□□□ -1.29
SF3B1-212ENST00000496458 FRS3O43559 492 aa7□□□□□ -1.29
SF3B1-212ENST00000496458 ADORA2AP29274 412 aa7□□□□□ -1.29
SF3B1-212ENST00000496458 DGKEP52429 567 aa7□□□□□ -1.29
SF3B1-212ENST00000496458 ATXN1P54253 815 aaKnown RBP7□□□□□ -1.29
SF3B1-212ENST00000496458 PRKAG1P54619 331 aa7□□□□□ -1.29
SF3B1-212ENST00000496458 PROK1P58294 105 aa7□□□□□ -1.29
SF3B1-212ENST00000496458 C21orf58P58505 322 aa7□□□□□ -1.29
SF3B1-212ENST00000496458 NHLH1Q02575 133 aa7□□□□□ -1.29
SF3B1-212ENST00000496458 GBX1Q14549 363 aa7□□□□□ -1.29
SF3B1-212ENST00000496458 CCDC142Q17RM4 750 aa7□□□□□ -1.29
SF3B1-212ENST00000496458 KIAA0753Q2KHM9 967 aa7□□□□□ -1.29
SF3B1-212ENST00000496458 RNF220Q5VTB9 566 aa7□□□□□ -1.29
SF3B1-212ENST00000496458 SRGAP1Q7Z6B7 1085 aa7□□□□□ -1.29
SF3B1-212ENST00000496458 FMNL3Q8IVF7 1028 aa7□□□□□ -1.29
SF3B1-212ENST00000496458 LRRC71Q8N4P6 559 aa7□□□□□ -1.29
SF3B1-212ENST00000496458 R3HDM4Q96D70 268 aa7□□□□□ -1.29
SF3B1-212ENST00000496458 METTL14Q9HCE5 456 aaKnown RBP7□□□□□ -1.29
SF3B1-212ENST00000496458 ZSCAN32Q9NX65 697 aa7□□□□□ -1.29
SF3B1-212ENST00000496458 OBP2AQ9NY56 170 aa7□□□□□ -1.29
SF3B1-212ENST00000496458 PADI4Q9UM07 663 aa7□□□□□ -1.29
SF3B1-212ENST00000496458 TBC1D30Q9Y2I9 924 aa7□□□□□ -1.29
SF3B1-212ENST00000496458 A1L4Q6 167 aa6.99□□□□□ -1.29
SF3B1-212ENST00000496458 H0YIZ8 118 aa6.99□□□□□ -1.29
SF3B1-212ENST00000496458 ONECUT2O95948 504 aa6.99□□□□□ -1.29
SF3B1-212ENST00000496458 ZBED1O96006 694 aa6.99□□□□□ -1.29
SF3B1-212ENST00000496458 HNRNPCP07910 306 aaKnown RBP eCLIP6.99□□□□□ -1.29
SF3B1-212ENST00000496458 ZNF37AP17032 561 aaPredicted RBP6.99□□□□□ -1.29
SF3B1-212ENST00000496458 KCNA3P22001 575 aa6.99□□□□□ -1.29
SF3B1-212ENST00000496458 CYP2C18P33260 490 aa6.99□□□□□ -1.29
SF3B1-212ENST00000496458 PDE1AP54750 535 aa6.99□□□□□ -1.29
SF3B1-212ENST00000496458 DARS2Q6PI48 645 aaKnown RBP6.99□□□□□ -1.29
SF3B1-212ENST00000496458 CHST15Q7LFX5 561 aaPredicted RBP6.99□□□□□ -1.29
SF3B1-212ENST00000496458 OR56A3Q8NH54 315 aa6.99□□□□□ -1.29
SF3B1-212ENST00000496458 BPIFB1Q8TDL5 484 aa6.99□□□□□ -1.29
SF3B1-212ENST00000496458 OSCP1Q8WVF1 389 aa6.99□□□□□ -1.29
SF3B1-212ENST00000496458 XAGE5Q8WWM1 108 aa6.99□□□□□ -1.29
SF3B1-212ENST00000496458 BHMT2Q9H2M3 363 aa6.99□□□□□ -1.29
SF3B1-212ENST00000496458 A1CFQ9NQ94 594 aaKnown RBP6.99□□□□□ -1.29
SF3B1-212ENST00000496458 DLL3Q9NYJ7 618 aa6.99□□□□□ -1.29
SF3B1-212ENST00000496458 SH2B3Q9UQQ2 575 aa6.99□□□□□ -1.29
SF3B1-212ENST00000496458 PAXBP1Q9Y5B6 917 aa6.99□□□□□ -1.29
SF3B1-212ENST00000496458 TRIM43BA6NCK2 446 aa6.98□□□□□ -1.29
SF3B1-212ENST00000496458 ISM1B1AKI9 464 aa6.98□□□□□ -1.29
SF3B1-212ENST00000496458 QSOX1O00391 747 aa6.98□□□□□ -1.29
SF3B1-212ENST00000496458 RBMXL2O75526 392 aaKnown RBP6.98□□□□□ -1.29
SF3B1-212ENST00000496458 ZKSCAN1P17029 563 aaPredicted RBP6.98□□□□□ -1.29
SF3B1-212ENST00000496458 ENGP17813 658 aa6.98□□□□□ -1.29
SF3B1-212ENST00000496458 CNGA2Q16280 664 aa6.98□□□□□ -1.29
SF3B1-212ENST00000496458 C3orf38Q5JPI3 329 aa6.98□□□□□ -1.29
SF3B1-212ENST00000496458 ANKRD16Q6P6B7 361 aa6.98□□□□□ -1.29
SF3B1-212ENST00000496458 ZDHHC24Q6UX98 284 aa6.98□□□□□ -1.29
SF3B1-212ENST00000496458 ZNF788Q6ZQV5 615 aa6.98□□□□□ -1.29
SF3B1-212ENST00000496458 MICU3Q86XE3 530 aa6.98□□□□□ -1.29
SF3B1-212ENST00000496458 TMEM171Q8WVE6 324 aa6.98□□□□□ -1.29
SF3B1-212ENST00000496458 TRIM43Q96BQ3 446 aaPredicted RBP6.98□□□□□ -1.29
SF3B1-212ENST00000496458 LRRC27Q9C0I9 530 aa6.98□□□□□ -1.29
SF3B1-212ENST00000496458 PRDM11Q9NQV5 511 aa6.98□□□□□ -1.29
SF3B1-212ENST00000496458 ADARB2Q9NS39 739 aaKnown RBP6.98□□□□□ -1.29
SF3B1-212ENST00000496458 AFF4Q9UHB7 1163 aaKnown RBP6.98□□□□□ -1.29
SF3B1-212ENST00000496458 OGDHLQ9ULD0 1010 aa6.98□□□□□ -1.29
SF3B1-212ENST00000496458 GOLIM4O00461 696 aa6.97□□□□□ -1.29
SF3B1-212ENST00000496458 MAP4K4O95819 1239 aaPredicted RBP6.97□□□□□ -1.29
SF3B1-212ENST00000496458 FAM163BP0C2L3 166 aa6.97□□□□□ -1.29
SF3B1-212ENST00000496458 PEX2P28328 305 aa6.97□□□□□ -1.29
SF3B1-212ENST00000496458 EEFSECP57772 596 aaKnown RBP6.97□□□□□ -1.29
SF3B1-212ENST00000496458 FAM193AP78312 1265 aa6.97□□□□□ -1.29
SF3B1-212ENST00000496458 POLD3Q15054 466 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms