RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 TGFBIQ15582 683 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 LETM2Q2VYF4 491 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 NIPAL1Q6NVV3 410 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 SULF1Q8IWU6 871 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 ZCCHC9Q8N567 271 aaKnown RBP9.48□□□□□ -0.89
HPS4-217ENST00000496385 NAP1L4Q99733 375 aaKnown RBP9.48□□□□□ -0.89
HPS4-217ENST00000496385 HGH1Q9BTY7 390 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 THTPAQ9BU02 230 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 MRPL1Q9BYD6 325 aaKnown RBP9.48□□□□□ -0.89
HPS4-217ENST00000496385 TRPC7Q9HCX4 862 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 DDX4Q9NQI0 724 aaKnown RBP9.48□□□□□ -0.89
HPS4-217ENST00000496385 C6orf203Q9P0P8 240 aaPredicted RBP9.48□□□□□ -0.89
HPS4-217ENST00000496385 PSMC3IPQ9P2W1 217 aaPredicted RBP9.48□□□□□ -0.89
HPS4-217ENST00000496385 TTLL3Q9Y4R7 772 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 GAKO14976 1311 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 GSTTP1A0A1W2PQM5 241 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 H3BRJ5 948 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 PIK3CDO00329 1044 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 PDXKO00764 312 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 ITM2AO43736 263 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 CLASP2O75122 1294 aaKnown RBP9.48□□□□□ -0.89
HPS4-217ENST00000496385 ESRRBO95718 433 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 COMTP21964 271 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 GSTO1P78417 241 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 EVX2Q03828 476 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 PKN2Q16513 984 aaKnown RBP9.48□□□□□ -0.89
HPS4-217ENST00000496385 SPDYE2Q495Y8 402 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 HYIQ5T013 277 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 ZNF362Q5T0B9 420 aaPredicted RBP9.48□□□□□ -0.89
HPS4-217ENST00000496385 AADACL2Q6P093 401 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 TRIM50Q86XT4 487 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 MAPKAPK5Q8IW41 473 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 TGFBRAP1Q8WUH2 860 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 SDR42E1Q8WUS8 393 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 CEP95Q96GE4 821 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 DEFB129Q9H1M3 183 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 CCDC68Q9H2F9 335 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 PARVBQ9HBI1 364 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 C6orf50Q9HD87 102 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 SOX13Q9UN79 622 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 EXOC7Q9UPT5 735 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 GIT1Q9Y2X7 761 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 TRIM17Q9Y577 477 aa9.48□□□□□ -0.89
HPS4-217ENST00000496385 KDM3AQ9Y4C1 1321 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 MAGEB6P1A0A0J9YX57 407 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 SPDYE16A6NNV3 312 aaPredicted RBP9.47□□□□□ -0.89
HPS4-217ENST00000496385 TXNDC9O14530 226 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 CYP2C9P11712 490 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 STIP1P31948 543 aaKnown RBP9.47□□□□□ -0.89
HPS4-217ENST00000496385 ADCY8P40145 1251 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 RHBDL3P58872 404 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 SEPT6Q14141 434 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 PRKD1Q15139 912 aaPredicted RBP9.47□□□□□ -0.89
HPS4-217ENST00000496385 ZNF829Q3KNS6 432 aaPredicted RBP9.47□□□□□ -0.89
HPS4-217ENST00000496385 MOB2Q70IA6 237 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 NLRX1Q86UT6 975 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 DGKHQ86XP1 1220 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 LSM14AQ8ND56 463 aaKnown RBP9.47□□□□□ -0.89
HPS4-217ENST00000496385 GLIS3Q8NEA6 775 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 GPKOWQ92917 476 aaPredicted RBP eCLIP9.47□□□□□ -0.89
HPS4-217ENST00000496385 EME1Q96AY2 570 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 GRIP2Q9C0E4 1043 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 GCNT4Q9P109 453 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 IGSF9Q9P2J2 1179 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 HEY1Q9Y5J3 304 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 MAD1L1Q9Y6D9 718 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 USP1O94782 785 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 LDHCP07864 332 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 FAM58BPP0C7Q3 252 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 FGFR1P11362 822 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 HMOX2P30519 316 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 PIK3CAP42336 1068 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 ARL4CP56559 192 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 KCNC4Q03721 635 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 GRM4Q14833 912 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 CALCRLQ16602 461 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 FBXL19Q6PCT2 694 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 SNX29Q8TEQ0 813 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 SREK1Q8WXA9 508 aaKnown RBP9.47□□□□□ -0.89
HPS4-217ENST00000496385 STARD8Q92502 1023 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 SELENONQ9NZV5 590 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 FAM198AQ9UFP1 575 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 DTNAQ9Y4J8 743 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 NFASCO94856 1347 aa9.47□□□□□ -0.89
HPS4-217ENST00000496385 RSPH10B2B2RC85 870 aa9.46□□□□□ -0.89
HPS4-217ENST00000496385 SMIM22K7EJ46 135 aa9.46□□□□□ -0.89
HPS4-217ENST00000496385 EML1O00423 815 aa9.46□□□□□ -0.89
HPS4-217ENST00000496385 ITGBL1O95965 494 aaPredicted RBP9.46□□□□□ -0.89
HPS4-217ENST00000496385 RSPH10BP0C881 870 aa9.46□□□□□ -0.89
HPS4-217ENST00000496385 OCM2P0CE71 109 aa9.46□□□□□ -0.89
HPS4-217ENST00000496385 OCMP0CE72 109 aaPredicted RBP9.46□□□□□ -0.89
HPS4-217ENST00000496385 COL6A2P12110 1019 aa9.46□□□□□ -0.89
HPS4-217ENST00000496385 ZNF23P17027 643 aa9.46□□□□□ -0.89
HPS4-217ENST00000496385 PMLP29590 882 aa9.46□□□□□ -0.89
HPS4-217ENST00000496385 SLC1A1P43005 524 aa9.46□□□□□ -0.89
HPS4-217ENST00000496385 TUBA4AP68366 448 aa9.46□□□□□ -0.89
HPS4-217ENST00000496385 TLR1Q15399 786 aa9.46□□□□□ -0.89
HPS4-217ENST00000496385 CCDC142Q17RM4 750 aa9.46□□□□□ -0.89
HPS4-217ENST00000496385 NBPF12Q5TAG4 269 aaPredicted RBP9.46□□□□□ -0.89
HPS4-217ENST00000496385 IL23RQ5VWK5 629 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms