RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 SOBPA7XYQ1 873 aa12.62□□□□□ -0.39
THBS3-208ENST00000496332 PROB1E7EW31 1015 aa12.62□□□□□ -0.39
THBS3-208ENST00000496332 NCAM2O15394 837 aa12.62□□□□□ -0.39
THBS3-208ENST00000496332 TADA3O75528 432 aa12.62□□□□□ -0.39
THBS3-208ENST00000496332 ANXA13P27216 316 aa12.62□□□□□ -0.39
THBS3-208ENST00000496332 PSMC2P35998 433 aaKnown RBP12.62□□□□□ -0.39
THBS3-208ENST00000496332 NBL1P41271 181 aa12.62□□□□□ -0.39
THBS3-208ENST00000496332 RAP1GAPP47736 663 aa12.62□□□□□ -0.39
THBS3-208ENST00000496332 KPNA1P52294 538 aaPredicted RBP12.62□□□□□ -0.39
THBS3-208ENST00000496332 FZD5Q13467 585 aa12.62□□□□□ -0.39
THBS3-208ENST00000496332 ZCWPW2Q504Y3 356 aa12.62□□□□□ -0.39
THBS3-208ENST00000496332 SCARA5Q6ZMJ2 495 aa12.62□□□□□ -0.39
THBS3-208ENST00000496332 INTS8Q75QN2 995 aaKnown RBP12.62□□□□□ -0.39
THBS3-208ENST00000496332 FAM186BQ8IYM0 893 aa12.62□□□□□ -0.39
THBS3-208ENST00000496332 B3GALNT2Q8NCR0 500 aa12.62□□□□□ -0.39
THBS3-208ENST00000496332 TTC8Q8TAM2 541 aa12.62□□□□□ -0.39
THBS3-208ENST00000496332 FAM3CQ92520 227 aa12.62□□□□□ -0.39
THBS3-208ENST00000496332 USP13Q92995 863 aaPredicted RBP12.62□□□□□ -0.39
THBS3-208ENST00000496332 CLDN23Q96B33 292 aa12.62□□□□□ -0.39
THBS3-208ENST00000496332 B3GNT5Q9BYG0 378 aa12.62□□□□□ -0.39
THBS3-208ENST00000496332 TDP1Q9NUW8 608 aa12.62□□□□□ -0.39
THBS3-208ENST00000496332 SPATA6Q9NWH7 488 aaPredicted RBP12.62□□□□□ -0.39
THBS3-208ENST00000496332 THG1LQ9NWX6 298 aaKnown RBP12.62□□□□□ -0.39
THBS3-208ENST00000496332 NDRG2Q9UN36 371 aaKnown RBP12.62□□□□□ -0.39
THBS3-208ENST00000496332 CCL26Q9Y258 94 aa12.62□□□□□ -0.39
THBS3-208ENST00000496332 CLDN5O00501 218 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 TRIM66O15016 1216 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 SMC2O95347 1197 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 HLA-DRAP01903 254 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 TRIM49P0CI25 452 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 TRIM49CP0CI26 452 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 KRT13P13646 458 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 P4HA1P13674 534 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 CCNE1P24864 410 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 PIK3CAP42336 1068 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 MAGEA9P43362 315 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 SOX9P48436 509 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 GCLMP48507 274 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 CACNA2D1P54289 1103 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 MLLT6P55198 1093 aaPredicted RBP12.61□□□□□ -0.39
THBS3-208ENST00000496332 PLCB2Q00722 1185 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 EDRF1Q3B7T1 1238 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 ZNF658Q5TYW1 1059 aaPredicted RBP12.61□□□□□ -0.39
THBS3-208ENST00000496332 SPOPLQ6IQ16 392 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 DENND5BQ6ZUT9 1274 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 ZNF687Q8N1G0 1237 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 TAF4BQ92750 862 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 ERCC4Q92889 916 aaPredicted RBP12.61□□□□□ -0.39
THBS3-208ENST00000496332 EEF2KMTQ96G04 330 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 C8orf48Q96LL4 319 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 CEP295NLQ96MC4 621 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 TIGD1Q96MW7 591 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 GSDMAQ96QA5 445 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 CYP2S1Q96SQ9 504 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 ZNF518BQ9C0D4 1074 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 ELOVL4Q9GZR5 314 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 SDCBP2Q9H190 292 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 TRPC7Q9HCX4 862 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 GTSE1Q9NYZ3 720 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 VPS13AQ96RL7 3174 aa12.61□□□□□ -0.39
THBS3-208ENST00000496332 ZFHX2Q9C0A1 2572 aaPredicted RBP12.61□□□□□ -0.39
THBS3-208ENST00000496332 F8VP50 259 aa12.6□□□□□ -0.39
THBS3-208ENST00000496332 LAMTOR5O43504 91 aa12.6□□□□□ -0.39
THBS3-208ENST00000496332 GFRA3O60609 400 aa12.6□□□□□ -0.39
THBS3-208ENST00000496332 ASS1P00966 412 aaKnown RBP12.6□□□□□ -0.39
THBS3-208ENST00000496332 SP9P0CG40 484 aa12.6□□□□□ -0.39
THBS3-208ENST00000496332 PRCPP42785 496 aa12.6□□□□□ -0.39
THBS3-208ENST00000496332 RPS9P46781 194 aaKnown RBP12.6□□□□□ -0.39
THBS3-208ENST00000496332 USP46P62068 366 aa12.6□□□□□ -0.39
THBS3-208ENST00000496332 ENPEPQ07075 957 aa12.6□□□□□ -0.39
THBS3-208ENST00000496332 TNK2Q07912 1038 aa12.6□□□□□ -0.39
THBS3-208ENST00000496332 PPP3CAQ08209 521 aa12.6□□□□□ -0.39
THBS3-208ENST00000496332 ZNF268Q14587 947 aaPredicted RBP12.6□□□□□ -0.39
THBS3-208ENST00000496332 MAML2Q8IZL2 1156 aaPredicted RBP12.6□□□□□ -0.39
THBS3-208ENST00000496332 SPATA20Q8TB22 786 aa12.6□□□□□ -0.39
THBS3-208ENST00000496332 SMARCE1Q969G3 411 aa12.6□□□□□ -0.39
THBS3-208ENST00000496332 MSANTD3Q96H12 275 aa12.6□□□□□ -0.39
THBS3-208ENST00000496332 TNIP3Q96KP6 325 aa12.6□□□□□ -0.39
THBS3-208ENST00000496332 SLC22A12Q96S37 553 aa12.6□□□□□ -0.39
THBS3-208ENST00000496332 C8orf33Q9H7E9 229 aaPredicted RBP12.6□□□□□ -0.39
THBS3-208ENST00000496332 MMRN2Q9H8L6 949 aa12.6□□□□□ -0.39
THBS3-208ENST00000496332 KIF9Q9HAQ2 790 aa12.6□□□□□ -0.39
THBS3-208ENST00000496332 LMAN1LQ9HAT1 526 aa12.6□□□□□ -0.39
THBS3-208ENST00000496332 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.6□□□□□ -0.39
THBS3-208ENST00000496332 GKN1Q9NS71 199 aa12.6□□□□□ -0.39
THBS3-208ENST00000496332 TMEM30AQ9NV96 361 aa12.6□□□□□ -0.39
THBS3-208ENST00000496332 EHD2Q9NZN4 543 aa12.6□□□□□ -0.39
THBS3-208ENST00000496332 HOOK1Q9UJC3 728 aaKnown RBP12.6□□□□□ -0.39
THBS3-208ENST00000496332 PCDHA5Q9Y5H7 936 aa12.6□□□□□ -0.39
THBS3-208ENST00000496332 TRAV19A0A0A6YYK7 116 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 C2orf78A6NCI8 922 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 SPECC1L-ADORA2AF8WAN1 911 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 CETN3O15182 167 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 CKMP06732 381 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 USP17L7P0C7H9 530 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 ASPAP45381 313 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 NOP14P78316 857 aaKnown RBP12.59□□□□□ -0.39
THBS3-208ENST00000496332 ORC1Q13415 861 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 ITPRIPL2Q3MIP1 535 aa12.59□□□□□ -0.39
THBS3-208ENST00000496332 COBLL1Q53SF7 1204 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms