RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 CBWD2Q8IUF1 395 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 CCDC65Q8IXS2 484 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 TMEM86AQ8N2M4 240 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 GPR161Q8N6U8 529 aaKnown RBP11.68□□□□□ -0.54
RNF220-217ENST00000496262 LRRC52Q8N7C0 313 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 OR5B17Q8NGF7 314 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 LEO1Q8WVC0 666 aaPredicted RBP11.68□□□□□ -0.54
RNF220-217ENST00000496262 TSC1Q92574 1164 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 ANKRD36BP1Q96IX9 119 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 ACBD6Q9BR61 282 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 TMEM206Q9H813 350 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 HPS4Q9NQG7 708 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 TFIP11Q9UBB9 837 aaKnown RBP11.68□□□□□ -0.54
RNF220-217ENST00000496262 SIX4Q9UIU6 781 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 PRDM4Q9UKN5 801 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.68□□□□□ -0.54
RNF220-217ENST00000496262 F5P12259 2224 aa11.68□□□□□ -0.54
RNF220-217ENST00000496262 NUP210Q8TEM1 1887 aaPredicted RBP11.68□□□□□ -0.54
RNF220-217ENST00000496262 CACNA1AO00555 2505 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 DCDC2BA2VCK2 349 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 OTOL1A6NHN0 477 aaPredicted RBP11.67□□□□□ -0.54
RNF220-217ENST00000496262 SMTNL1A8MU46 457 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 ATP2C2O75185 946 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 TADA3O75528 432 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 CAVIN2O95810 425 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 TNNC2P02585 160 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 F11P03951 625 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 CKMP06732 381 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 DDX6P26196 483 aaKnown RBP eCLIP11.67□□□□□ -0.54
RNF220-217ENST00000496262 WEE1P30291 646 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 ATXN1P54253 815 aaKnown RBP11.67□□□□□ -0.54
RNF220-217ENST00000496262 RPL10AP62906 217 aaKnown RBP11.67□□□□□ -0.54
RNF220-217ENST00000496262 ASIC1P78348 528 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 DMTNQ08495 405 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 MYO1EQ12965 1108 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 SYCP1Q15431 976 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 SOWAHAQ2M3V2 549 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 NAIF1Q69YI7 327 aaPredicted RBP11.67□□□□□ -0.54
RNF220-217ENST00000496262 PKN3Q6P5Z2 889 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 STXBP4Q6ZWJ1 553 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 LONP2Q86WA8 852 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 DRC7Q8IY82 874 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 TOP6BLQ8N6T0 577 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 CXorf38Q8TB03 319 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 RIN3Q8TB24 985 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 ANKRD7Q92527 254 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 DHX58Q96C10 678 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 SLC22A12Q96S37 553 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 CYP2S1Q96SQ9 504 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 FAM83CQ9BQN1 747 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 ZSCAN16Q9H4T2 348 aaPredicted RBP11.67□□□□□ -0.54
RNF220-217ENST00000496262 TDP1Q9NUW8 608 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 INTS13Q9NVM9 706 aa11.67□□□□□ -0.54
RNF220-217ENST00000496262 POLR3BQ9NW08 1133 aaPredicted RBP11.67□□□□□ -0.54
RNF220-217ENST00000496262 PRR5-ARHGAP8B1AHC4 643 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 SPTLC2O15270 562 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 CLSTN1O94985 981 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 EGFP01133 1207 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 DLATP10515 647 aaKnown RBP11.66□□□□□ -0.54
RNF220-217ENST00000496262 TGM1P22735 817 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 LMO2P25791 158 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 PCSK1P29120 753 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 LHX1P48742 406 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 ARHGAP8P85298 464 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 CYP27A1Q02318 531 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 GRSF1Q12849 480 aaKnown RBP eCLIP11.66□□□□□ -0.54
RNF220-217ENST00000496262 CAMK4Q16566 473 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 FSTL4Q6MZW2 842 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 LUZP1Q86V48 1076 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 MON1AQ86VX9 555 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 NELFCDQ8IXH7 590 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 RDH13Q8NBN7 331 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 LINC00301Q8NCQ3 95 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 MYLPFQ96A32 169 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 HPDLQ96IR7 371 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 MMS19Q96T76 1030 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 PKMYT1Q99640 499 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 SYT15Q9BQS2 421 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 KIF9Q9HAQ2 790 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 ABCB6Q9NP58 842 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 GDAP2Q9NXN4 497 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 HSPBP1Q9NZL4 362 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 UXTQ9UBK9 157 aaPredicted RBP11.66□□□□□ -0.54
RNF220-217ENST00000496262 ZMYM5Q9UJ78 669 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 WNT6Q9Y6F9 365 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 CEP250Q9BV73 2442 aa11.66□□□□□ -0.54
RNF220-217ENST00000496262 TRAV19A0A0A6YYK7 116 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.65□□□□□ -0.54
RNF220-217ENST00000496262 C2orf78A6NCI8 922 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 ZNF233A6NK53 670 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 CLIC2O15247 247 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 CTIFO43310 598 aaKnown RBP11.65□□□□□ -0.54
RNF220-217ENST00000496262 RNF40O75150 1001 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 NOL4O94818 638 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 PAPSS2O95340 614 aaPredicted RBP11.65□□□□□ -0.54
RNF220-217ENST00000496262 RETP07949 1114 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 PDGFRBP09619 1106 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 BDNFP23560 247 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 CASP1P29466 404 aa11.65□□□□□ -0.54
RNF220-217ENST00000496262 GRIK1P39086 918 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms