RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 BTBD6Q96KE9 485 aa25.73■■□□□ 1.71
PPP1R3F-205ENST00000495799 MCEEQ96PE7 176 aa25.73■■□□□ 1.71
PPP1R3F-205ENST00000495799 IL23AQ9NPF7 189 aa25.73■■□□□ 1.71
PPP1R3F-205ENST00000495799 CRTAC1Q9NQ79 661 aa25.73■■□□□ 1.71
PPP1R3F-205ENST00000495799 SF3B1O75533 1304 aaKnown RBP eCLIP25.72■■□□□ 1.71
PPP1R3F-205ENST00000495799 CCDC66A2RUB6 948 aa25.72■■□□□ 1.71
PPP1R3F-205ENST00000495799 CTAGE15A4D2H0 777 aa25.72■■□□□ 1.71
PPP1R3F-205ENST00000495799 TMEM191CA6NGB0 347 aa25.72■■□□□ 1.71
PPP1R3F-205ENST00000495799 GOLGA8SH3BPF8 625 aa25.72■■□□□ 1.71
PPP1R3F-205ENST00000495799 DGKIO75912 1065 aa25.72■■□□□ 1.71
PPP1R3F-205ENST00000495799 CTAGE8P0CG41 777 aa25.72■■□□□ 1.71
PPP1R3F-205ENST00000495799 NPR3P17342 541 aa25.72■■□□□ 1.71
PPP1R3F-205ENST00000495799 CTNNA2P26232 953 aa25.72■■□□□ 1.71
PPP1R3F-205ENST00000495799 SLC11A1P49279 550 aa25.72■■□□□ 1.71
PPP1R3F-205ENST00000495799 DNA2P51530 1060 aa25.72■■□□□ 1.71
PPP1R3F-205ENST00000495799 PPIGQ13427 754 aaKnown RBP eCLIP25.72■■□□□ 1.71
PPP1R3F-205ENST00000495799 CFAP221Q4G0U5 840 aa25.72■■□□□ 1.71
PPP1R3F-205ENST00000495799 CTAGE6Q86UF2 777 aa25.72■■□□□ 1.71
PPP1R3F-205ENST00000495799 CTAGE4Q8IX94 777 aa25.72■■□□□ 1.71
PPP1R3F-205ENST00000495799 TOP1MTQ969P6 601 aa25.72■■□□□ 1.71
PPP1R3F-205ENST00000495799 CAPZA3Q96KX2 299 aa25.72■■□□□ 1.71
PPP1R3F-205ENST00000495799 LPIN3Q9BQK8 851 aa25.72■■□□□ 1.71
PPP1R3F-205ENST00000495799 KIAA0100Q14667 2235 aaKnown RBP25.71■■□□□ 1.71
PPP1R3F-205ENST00000495799 UQCRHLA0A096LP55 91 aa25.71■■□□□ 1.71
PPP1R3F-205ENST00000495799 E5RJQ4 531 aa25.71■■□□□ 1.71
PPP1R3F-205ENST00000495799 UQCRHP07919 91 aa25.71■■□□□ 1.71
PPP1R3F-205ENST00000495799 ITGB8P26012 769 aa25.71■■□□□ 1.71
PPP1R3F-205ENST00000495799 PIGHQ14442 188 aaPredicted RBP25.71■■□□□ 1.71
PPP1R3F-205ENST00000495799 KIAA0319Q5VV43 1072 aa25.71■■□□□ 1.71
PPP1R3F-205ENST00000495799 OR6B2Q6IFH4 312 aa25.71■■□□□ 1.71
PPP1R3F-205ENST00000495799 PMF1Q6P1K2 205 aa25.71■■□□□ 1.71
PPP1R3F-205ENST00000495799 FNIP1Q8TF40 1166 aa25.71■■□□□ 1.71
PPP1R3F-205ENST00000495799 PSMB7Q99436 277 aa25.71■■□□□ 1.71
PPP1R3F-205ENST00000495799 B3GNT5Q9BYG0 378 aa25.71■■□□□ 1.71
PPP1R3F-205ENST00000495799 EFCAB8A8MWE9 144 aa25.7■■□□□ 1.7
PPP1R3F-205ENST00000495799 GALTP07902 379 aa25.7■■□□□ 1.7
PPP1R3F-205ENST00000495799 TKTP29401 623 aaKnown RBP25.7■■□□□ 1.7
PPP1R3F-205ENST00000495799 CXCR5P32302 372 aa25.7■■□□□ 1.7
PPP1R3F-205ENST00000495799 RPL34P49207 117 aaKnown RBP25.7■■□□□ 1.7
PPP1R3F-205ENST00000495799 RGS7P49802 495 aa25.7■■□□□ 1.7
PPP1R3F-205ENST00000495799 CLUL1Q15846 466 aa25.7■■□□□ 1.7
PPP1R3F-205ENST00000495799 PTPROQ16827 1216 aa25.7■■□□□ 1.7
PPP1R3F-205ENST00000495799 FAM102AQ5T9C2 384 aaPredicted RBP25.7■■□□□ 1.7
PPP1R3F-205ENST00000495799 FAM171BQ6P995 826 aa25.7■■□□□ 1.7
PPP1R3F-205ENST00000495799 FAM35AQ86V20 835 aa25.7■■□□□ 1.7
PPP1R3F-205ENST00000495799 COG1Q8WTW3 980 aa25.7■■□□□ 1.7
PPP1R3F-205ENST00000495799 SMARCD1Q96GM5 515 aa25.7■■□□□ 1.7
PPP1R3F-205ENST00000495799 PCED1BQ96HM7 432 aa25.7■■□□□ 1.7
PPP1R3F-205ENST00000495799 RTP3Q9BQQ7 232 aa25.7■■□□□ 1.7
PPP1R3F-205ENST00000495799 CARD9Q9H257 536 aa25.7■■□□□ 1.7
PPP1R3F-205ENST00000495799 MYBPHLA2RUH7 354 aa25.69■■□□□ 1.7
PPP1R3F-205ENST00000495799 F8W810 466 aa25.69■■□□□ 1.7
PPP1R3F-205ENST00000495799 DDX3YO15523 660 aaKnown RBP25.69■■□□□ 1.7
PPP1R3F-205ENST00000495799 OAZ2O95190 189 aa25.69■■□□□ 1.7
PPP1R3F-205ENST00000495799 DESP17661 470 aa25.69■■□□□ 1.7
PPP1R3F-205ENST00000495799 CTNNA1P35221 906 aaKnown RBP25.69■■□□□ 1.7
PPP1R3F-205ENST00000495799 SCNN1AP37088 669 aa25.69■■□□□ 1.7
PPP1R3F-205ENST00000495799 CREG2Q8IUH2 290 aa25.69■■□□□ 1.7
PPP1R3F-205ENST00000495799 METTL5Q9NRN9 209 aaKnown RBP25.69■■□□□ 1.7
PPP1R3F-205ENST00000495799 KRT82Q9NSB4 513 aa25.69■■□□□ 1.7
PPP1R3F-205ENST00000495799 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.69■■□□□ 1.7
PPP1R3F-205ENST00000495799 ZNF185O15231 689 aa25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 ALDH7A1P49419 539 aaKnown RBP25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 WDR5P61964 334 aaKnown RBP25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 RPL7AP62424 266 aaKnown RBP25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 C4orf50Q6ZRC1 276 aa25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 FAM183BPQ6ZVS7 135 aa25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 DCP1BQ8IZD4 617 aaKnown RBP25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 NIPA2Q8N8Q9 360 aa25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 KCTD13Q8WZ19 329 aa25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 GOLGA1Q92805 767 aa25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 CD101Q93033 1021 aa25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 PLVAPQ9BX97 442 aa25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 OXCT2Q9BYC2 517 aaPredicted RBP25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 UBXN6Q9BZV1 441 aa25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 TRIM7Q9C029 511 aa25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 MARCH5Q9NX47 278 aa25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 TJP2Q9UDY2 1190 aa25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 PCDHA3Q9Y5H8 950 aa25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 TULP2O00295 520 aa25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 CLDN5O00501 218 aa25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 CTIFO43310 598 aaKnown RBP25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 BCAR1P56945 870 aa25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 FUT10Q6P4F1 479 aa25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 PAQR9Q6ZVX9 377 aa25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 MYLPFQ96A32 169 aa25.68■■□□□ 1.7
PPP1R3F-205ENST00000495799 TADA3O75528 432 aa25.67■■□□□ 1.7
PPP1R3F-205ENST00000495799 AP1G2O75843 785 aa25.67■■□□□ 1.7
PPP1R3F-205ENST00000495799 GJB6O95452 261 aa25.67■■□□□ 1.7
PPP1R3F-205ENST00000495799 SLC6A3Q01959 620 aa25.67■■□□□ 1.7
PPP1R3F-205ENST00000495799 ACAP1Q15027 740 aa25.67■■□□□ 1.7
PPP1R3F-205ENST00000495799 FAM171A1Q5VUB5 890 aa25.67■■□□□ 1.7
PPP1R3F-205ENST00000495799 ZNF280DQ6N043 979 aa25.67■■□□□ 1.7
PPP1R3F-205ENST00000495799 CLEC20AQ6ZU45 233 aa25.67■■□□□ 1.7
PPP1R3F-205ENST00000495799 ZNF572Q7Z3I7 529 aaPredicted RBP25.67■■□□□ 1.7
PPP1R3F-205ENST00000495799 CMTR2Q8IYT2 770 aaKnown RBP25.67■■□□□ 1.7
PPP1R3F-205ENST00000495799 LRRC4Q9HBW1 653 aa25.67■■□□□ 1.7
PPP1R3F-205ENST00000495799 OR6C75A6NL08 312 aa25.66■■□□□ 1.7
PPP1R3F-205ENST00000495799 PSTPIP1O43586 416 aa25.66■■□□□ 1.7
PPP1R3F-205ENST00000495799 CEP104O60308 925 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms